RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 IQSEC2Q5JU85 1478 aa0.64□□□□□ -2.31
XRCC4-204ENST00000509268 LEPROTL1O95214 131 aa0.63□□□□□ -2.31
XRCC4-204ENST00000509268 SPINK7P58062 85 aa0.63□□□□□ -2.31
XRCC4-204ENST00000509268 SMIM11AP58511 58 aa0.63□□□□□ -2.31
XRCC4-204ENST00000509268 HMGN3Q15651 99 aa0.63□□□□□ -2.31
XRCC4-204ENST00000509268 BVES-AS1Q5T3Y7 98 aa0.63□□□□□ -2.31
XRCC4-204ENST00000509268 Q6JHZ5 121 aa0.63□□□□□ -2.31
XRCC4-204ENST00000509268 LINC00643Q86TS7 51 aa0.63□□□□□ -2.31
XRCC4-204ENST00000509268 TMEM263Q8WUH6 116 aaKnown RBP0.63□□□□□ -2.31
XRCC4-204ENST00000509268 RRBP1Q9P2E9 1410 aaKnown RBP0.63□□□□□ -2.31
XRCC4-204ENST00000509268 KMT2DO14686 5537 aa0.63□□□□□ -2.31
XRCC4-204ENST00000509268 CACNA1CQ13936 2221 aa0.63□□□□□ -2.31
XRCC4-204ENST00000509268 TENM4Q6N022 2769 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 D6R8Y8 96 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 IGLC2P0DOY2 106 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 IGLC3P0DOY3 106 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 C10orf113Q5VZT2 155 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 SPATA8Q6RVD6 105 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 MUSTN1Q8IVN3 82 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 DEFB107AQ8IZN7 70 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 PROK2Q9HC23 129 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 SYNE2Q8WXH0 6885 aaKnown RBP0.62□□□□□ -2.31
XRCC4-204ENST00000509268 RAPGEF6Q8TEU7 1601 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 MYH4Q9Y623 1939 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 NAV3Q8IVL0 2385 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 ANKRD11Q6UB99 2663 aaPredicted RBP0.62□□□□□ -2.31
XRCC4-204ENST00000509268 ABCA12Q86UK0 2595 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 NCOR2Q9Y618 2525 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 MACF1Q9UPN3 7388 aaKnown RBP0.62□□□□□ -2.31
XRCC4-204ENST00000509268 LAMA4Q16363 1823 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 DNMBPQ6XZF7 1577 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.62□□□□□ -2.31
XRCC4-204ENST00000509268 ABCC2Q92887 1545 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 C1orf167Q5SNV9 1468 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 MYMXA0A1B0GTQ4 84 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 KANTRA0A1W2PQU2 76 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 H3BUT2 72 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 ACYP1P07311 99 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 HAMPP81172 84 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 C10orf95Q9H7T3 257 aa0.62□□□□□ -2.31
XRCC4-204ENST00000509268 LRRC37A2A6NM11 1700 aa0.61□□□□□ -2.31
XRCC4-204ENST00000509268 MAP3K4Q9Y6R4 1608 aa0.61□□□□□ -2.31
XRCC4-204ENST00000509268 ITPR3Q14573 2671 aa0.61□□□□□ -2.31
XRCC4-204ENST00000509268 PIN1P1O15428 100 aa0.61□□□□□ -2.31
XRCC4-204ENST00000509268 KRTAP20-1Q3LI63 56 aa0.61□□□□□ -2.31
XRCC4-204ENST00000509268 BDP1A6H8Y1 2624 aa0.61□□□□□ -2.31
XRCC4-204ENST00000509268 TTC28Q96AY4 2481 aa0.6□□□□□ -2.31
XRCC4-204ENST00000509268 NUP188Q5SRE5 1749 aa0.6□□□□□ -2.31
XRCC4-204ENST00000509268 KNDC1Q76NI1 1749 aa0.6□□□□□ -2.31
XRCC4-204ENST00000509268 SUPT6HQ7KZ85 1726 aaKnown RBP0.6□□□□□ -2.31
XRCC4-204ENST00000509268 LRRIQ1Q96JM4 1722 aa0.6□□□□□ -2.31
XRCC4-204ENST00000509268 NHSL1Q5SYE7 1610 aa0.6□□□□□ -2.31
XRCC4-204ENST00000509268 CEP350Q5VT06 3117 aa0.6□□□□□ -2.31
XRCC4-204ENST00000509268 A0A0D9SG42 100 aa0.6□□□□□ -2.31
XRCC4-204ENST00000509268 H0Y9P7 68 aa0.6□□□□□ -2.31
XRCC4-204ENST00000509268 ARL14EPLP0DKL9 152 aa0.6□□□□□ -2.31
XRCC4-204ENST00000509268 PLGLAQ15195 96 aa0.6□□□□□ -2.31
XRCC4-204ENST00000509268 SPINK9Q5DT21 86 aa0.6□□□□□ -2.31
XRCC4-204ENST00000509268 SSBP3-AS1Q7Z2R9 100 aa0.6□□□□□ -2.31
XRCC4-204ENST00000509268 UBE2DNLQ8IWF7 75 aa0.6□□□□□ -2.31
XRCC4-204ENST00000509268 C18orf32Q8TCD1 76 aa0.6□□□□□ -2.31
XRCC4-204ENST00000509268 UBE2D4Q9Y2X8 147 aa0.6□□□□□ -2.31
XRCC4-204ENST00000509268 TMEM131LA2VDJ0 1609 aa0.6□□□□□ -2.31
XRCC4-204ENST00000509268 LRP6O75581 1613 aa0.6□□□□□ -2.31
XRCC4-204ENST00000509268 LAMC1P11047 1609 aa0.6□□□□□ -2.31
XRCC4-204ENST00000509268 CUX1P39880 1505 aa0.6□□□□□ -2.31
XRCC4-204ENST00000509268 CCDC88BA6NC98 1476 aa0.59□□□□□ -2.31
XRCC4-204ENST00000509268 PLXNB2O15031 1838 aa0.59□□□□□ -2.31
XRCC4-204ENST00000509268 FASNP49327 2511 aaKnown RBP0.59□□□□□ -2.31
XRCC4-204ENST00000509268 CEBPZOSA8MTT3 80 aa0.59□□□□□ -2.31
XRCC4-204ENST00000509268 FXYD6P3P58550 94 aa0.59□□□□□ -2.31
XRCC4-204ENST00000509268 Q5BKY6 102 aa0.59□□□□□ -2.31
XRCC4-204ENST00000509268 SMCO4Q9NRQ5 59 aa0.59□□□□□ -2.31
XRCC4-204ENST00000509268 IGSF10Q6WRI0 2623 aa0.59□□□□□ -2.32
XRCC4-204ENST00000509268 TENM3Q9P273 2699 aa0.59□□□□□ -2.32
XRCC4-204ENST00000509268 TNRC18O15417 2968 aaPredicted RBP0.59□□□□□ -2.32
XRCC4-204ENST00000509268 AHCTF1Q8WYP5 2266 aa0.59□□□□□ -2.32
XRCC4-204ENST00000509268 TRBV6-1A0A0K0K1D8 114 aa0.58□□□□□ -2.32
XRCC4-204ENST00000509268 CFDP00746 253 aaPredicted RBP0.58□□□□□ -2.32
XRCC4-204ENST00000509268 DEFB121Q5J5C9 76 aa0.58□□□□□ -2.32
XRCC4-204ENST00000509268 C6orf201Q7Z4U5 140 aa0.58□□□□□ -2.32
XRCC4-204ENST00000509268 KCPQ6ZWJ8 1503 aa0.58□□□□□ -2.32
XRCC4-204ENST00000509268 KDM3BQ7LBC6 1761 aa0.58□□□□□ -2.32
XRCC4-204ENST00000509268 NCOA2Q15596 1464 aa0.58□□□□□ -2.32
XRCC4-204ENST00000509268 LRRK2Q5S007 2527 aa0.58□□□□□ -2.32
XRCC4-204ENST00000509268 SHPRHQ149N8 1683 aa0.58□□□□□ -2.32
XRCC4-204ENST00000509268 FAM208BQ5VWN6 2430 aa0.58□□□□□ -2.32
XRCC4-204ENST00000509268 CREBBPQ92793 2442 aa0.58□□□□□ -2.32
XRCC4-204ENST00000509268 GCN1Q92616 2671 aaKnown RBP0.58□□□□□ -2.32
XRCC4-204ENST00000509268 TARBP1Q13395 1621 aaKnown RBP0.58□□□□□ -2.32
XRCC4-204ENST00000509268 PAPPA2Q9BXP8 1791 aa0.58□□□□□ -2.32
XRCC4-204ENST00000509268 GOLGA4Q13439 2230 aaKnown RBP0.58□□□□□ -2.32
XRCC4-204ENST00000509268 GNGT1P63211 74 aa0.57□□□□□ -2.32
XRCC4-204ENST00000509268 DEFA5Q01523 94 aa0.57□□□□□ -2.32
XRCC4-204ENST00000509268 PDZD2O15018 2839 aa0.57□□□□□ -2.32
XRCC4-204ENST00000509268 ANKARQ7Z5J8 1434 aa0.57□□□□□ -2.32
XRCC4-204ENST00000509268 NSD1Q96L73 2696 aaPredicted RBP0.57□□□□□ -2.32
XRCC4-204ENST00000509268 ABCA8O94911 1581 aa0.57□□□□□ -2.32
XRCC4-204ENST00000509268 CFAP74Q9C0B2 1584 aa0.57□□□□□ -2.32
XRCC4-204ENST00000509268 WDFY4Q6ZS81 3184 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms