RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 ALKBH7Q9BT30 221 aaPredicted RBP6.58□□□□□ -1.36
RNF4-212ENST00000509258 LINC01546A6NGU7 62 aa6.57□□□□□ -1.36
RNF4-212ENST00000509258 KRTAP1-4P0C5Y4 121 aa6.57□□□□□ -1.36
RNF4-212ENST00000509258 UQCC3Q6UW78 93 aa6.57□□□□□ -1.36
RNF4-212ENST00000509258 TIMM17AQ99595 171 aa6.57□□□□□ -1.36
RNF4-212ENST00000509258 XAGE1AQ9HD64 81 aa6.57□□□□□ -1.36
RNF4-212ENST00000509258 SMIM1B2RUZ4 78 aa6.56□□□□□ -1.36
RNF4-212ENST00000509258 K7EMI3 77 aa6.56□□□□□ -1.36
RNF4-212ENST00000509258 NPSP0C0P6 89 aa6.56□□□□□ -1.36
RNF4-212ENST00000509258 G0S2P27469 103 aa6.56□□□□□ -1.36
RNF4-212ENST00000509258 CKS1BP61024 79 aa6.56□□□□□ -1.36
RNF4-212ENST00000509258 SEC11AP67812 179 aa6.56□□□□□ -1.36
RNF4-212ENST00000509258 PAPPA-AS1Q5QFB9 102 aa6.56□□□□□ -1.36
RNF4-212ENST00000509258 C10orf91Q5T1B1 145 aa6.56□□□□□ -1.36
RNF4-212ENST00000509258 COMMD7Q86VX2 200 aa6.56□□□□□ -1.36
RNF4-212ENST00000509258 Q8IZM0 81 aa6.56□□□□□ -1.36
RNF4-212ENST00000509258 SEC11CQ9BY50 192 aa6.56□□□□□ -1.36
RNF4-212ENST00000509258 TRAV9-1A0A075B6T8 112 aa6.55□□□□□ -1.36
RNF4-212ENST00000509258 A0A096LNJ9 63 aa6.55□□□□□ -1.36
RNF4-212ENST00000509258 NUPR1O60356 82 aa6.55□□□□□ -1.36
RNF4-212ENST00000509258 LBHQ53QV2 105 aaPredicted RBP6.55□□□□□ -1.36
RNF4-212ENST00000509258 URB1-AS1Q96HZ7 61 aa6.55□□□□□ -1.36
RNF4-212ENST00000509258 SCGB3A1Q96QR1 104 aa6.55□□□□□ -1.36
RNF4-212ENST00000509258 GNB1LQ9BYB4 327 aa6.55□□□□□ -1.36
RNF4-212ENST00000509258 MUC2Q02817 5179 aa6.54□□□□□ -1.36
RNF4-212ENST00000509258 IGLV5-45A0A087WSX0 123 aa6.54□□□□□ -1.36
RNF4-212ENST00000509258 HERVK_113P63121 156 aa6.54□□□□□ -1.36
RNF4-212ENST00000509258 C6orf226Q5I0X4 101 aa6.54□□□□□ -1.36
RNF4-212ENST00000509258 ERASQ7Z444 233 aa6.54□□□□□ -1.36
RNF4-212ENST00000509258 CARHSP1Q9Y2V2 147 aaKnown RBP6.54□□□□□ -1.36
RNF4-212ENST00000509258 SPINK8P0C7L1 97 aa6.53□□□□□ -1.36
RNF4-212ENST00000509258 CXCL5P42830 114 aa6.53□□□□□ -1.36
RNF4-212ENST00000509258 MRPL18Q9H0U6 180 aaKnown RBP6.53□□□□□ -1.36
RNF4-212ENST00000509258 CST9LQ9H4G1 147 aa6.53□□□□□ -1.36
RNF4-212ENST00000509258 GEMIN7Q9H840 131 aaKnown RBP6.53□□□□□ -1.36
RNF4-212ENST00000509258 C22orf24Q9Y442 160 aa6.53□□□□□ -1.36
RNF4-212ENST00000509258 F8VRH5 84 aa6.52□□□□□ -1.37
RNF4-212ENST00000509258 ZNF861PO60384 105 aa6.52□□□□□ -1.37
RNF4-212ENST00000509258 TINCRA0A1B0GVN0 87 aa6.51□□□□□ -1.37
RNF4-212ENST00000509258 FABP9Q0Z7S8 132 aa6.51□□□□□ -1.37
RNF4-212ENST00000509258 PRR4Q16378 134 aa6.51□□□□□ -1.37
RNF4-212ENST00000509258 COX7B2Q8TF08 81 aa6.51□□□□□ -1.37
RNF4-212ENST00000509258 A0A0U1RQV1 116 aa6.5□□□□□ -1.37
RNF4-212ENST00000509258 SCO1O75880 301 aa6.5□□□□□ -1.37
RNF4-212ENST00000509258 S100PP25815 95 aa6.5□□□□□ -1.37
RNF4-212ENST00000509258 RPL28P46779 137 aaKnown RBP6.5□□□□□ -1.37
RNF4-212ENST00000509258 PMCHL1Q16048 86 aa6.5□□□□□ -1.37
RNF4-212ENST00000509258 PDZD11Q5EBL8 140 aa6.5□□□□□ -1.37
RNF4-212ENST00000509258 RPS10P5Q9NQ39 176 aa6.5□□□□□ -1.37
RNF4-212ENST00000509258 TP73-AS1Q9UF72 201 aa6.5□□□□□ -1.37
RNF4-212ENST00000509258 LINC01549A6NIU2 74 aa6.49□□□□□ -1.37
RNF4-212ENST00000509258 PMVKQ15126 192 aa6.49□□□□□ -1.37
RNF4-212ENST00000509258 FA2HQ7L5A8 372 aa6.49□□□□□ -1.37
RNF4-212ENST00000509258 C18orf32Q8TCD1 76 aa6.49□□□□□ -1.37
RNF4-212ENST00000509258 IGLC3P0DOY3 106 aa6.48□□□□□ -1.37
RNF4-212ENST00000509258 RAB5BP61020 215 aa6.48□□□□□ -1.37
RNF4-212ENST00000509258 RHEBQ15382 184 aa6.48□□□□□ -1.37
RNF4-212ENST00000509258 MRPL55Q7Z7F7 128 aaKnown RBP6.48□□□□□ -1.37
RNF4-212ENST00000509258 LINC00167Q96N53 147 aa6.48□□□□□ -1.37
RNF4-212ENST00000509258 GAGE10A6NGK3 116 aa6.47□□□□□ -1.37
RNF4-212ENST00000509258 RPL37AP8A6NKH3 93 aa6.47□□□□□ -1.37
RNF4-212ENST00000509258 ZNF22P17026 224 aaPredicted RBP6.47□□□□□ -1.37
RNF4-212ENST00000509258 Q8NDZ9 215 aa6.47□□□□□ -1.37
RNF4-212ENST00000509258 A0A087X002 238 aa6.46□□□□□ -1.38
RNF4-212ENST00000509258 IGLV5-39A0A0G2JS06 123 aa6.46□□□□□ -1.38
RNF4-212ENST00000509258 BCE1O60756 84 aa6.46□□□□□ -1.38
RNF4-212ENST00000509258 COX19Q49B96 90 aa6.46□□□□□ -1.38
RNF4-212ENST00000509258 YPEL4Q96NS1 127 aa6.46□□□□□ -1.38
RNF4-212ENST00000509258 SMCO4Q9NRQ5 59 aa6.46□□□□□ -1.38
RNF4-212ENST00000509258 IGLV5-37A0A075B6J1 123 aa6.45□□□□□ -1.38
RNF4-212ENST00000509258 C11orf86A6NJI1 115 aa6.45□□□□□ -1.38
RNF4-212ENST00000509258 CRYGAP11844 174 aa6.45□□□□□ -1.38
RNF4-212ENST00000509258 KRTAP13-1Q8IUC0 172 aa6.45□□□□□ -1.38
RNF4-212ENST00000509258 TRAPPC1Q9Y5R8 145 aa6.45□□□□□ -1.38
RNF4-212ENST00000509258 LINC00614P0C842 121 aa6.44□□□□□ -1.38
RNF4-212ENST00000509258 NDUFA6P56556 154 aa6.44□□□□□ -1.38
RNF4-212ENST00000509258 NKAPP1Q8N9T2 125 aa6.44□□□□□ -1.38
RNF4-212ENST00000509258 TYMSOSQ8TAI1 123 aa6.44□□□□□ -1.38
RNF4-212ENST00000509258 ANAPC11Q9NYG5 84 aa6.44□□□□□ -1.38
RNF4-212ENST00000509258 HBDP02042 147 aa6.43□□□□□ -1.38
RNF4-212ENST00000509258 APOC3P02656 99 aa6.43□□□□□ -1.38
RNF4-212ENST00000509258 PFN2P35080 140 aa6.43□□□□□ -1.38
RNF4-212ENST00000509258 H3BRM9 83 aa6.42□□□□□ -1.38
RNF4-212ENST00000509258 TSPAN13O95857 204 aa6.42□□□□□ -1.38
RNF4-212ENST00000509258 VPREB1P12018 145 aa6.42□□□□□ -1.38
RNF4-212ENST00000509258 UBE2AP49459 152 aa6.42□□□□□ -1.38
RNF4-212ENST00000509258 ZNF625Q96I27 306 aaPredicted RBP6.42□□□□□ -1.38
RNF4-212ENST00000509258 SND1-IT1Q9HBX3 110 aa6.42□□□□□ -1.38
RNF4-212ENST00000509258 ATP5LO75964 103 aa6.41□□□□□ -1.38
RNF4-212ENST00000509258 KRTAP13-2Q52LG2 175 aa6.41□□□□□ -1.38
RNF4-212ENST00000509258 BAGE3Q86Y29 109 aa6.41□□□□□ -1.38
RNF4-212ENST00000509258 IGKV2-28A0A075B6P5 120 aa6.4□□□□□ -1.38
RNF4-212ENST00000509258 TMEM238C9JI98 176 aa6.4□□□□□ -1.38
RNF4-212ENST00000509258 IGKV2D-28P01615 120 aa6.4□□□□□ -1.38
RNF4-212ENST00000509258 ERG28Q9UKR5 140 aa6.4□□□□□ -1.38
RNF4-212ENST00000509258 KRTAP9-2Q9BYQ4 174 aa6.39□□□□□ -1.39
RNF4-212ENST00000509258 CTAG1AP78358 180 aa6.38□□□□□ -1.39
RNF4-212ENST00000509258 PRLHP81277 87 aa6.38□□□□□ -1.39
RNF4-212ENST00000509258 RPL24P83731 157 aaKnown RBP6.38□□□□□ -1.39
RNF4-212ENST00000509258 FAM229BQ4G0N7 80 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms