RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 IMUPQ9GZP8 106 aa7.73□□□□□ -1.17
SH3RF1-203ENST00000508685 RPL28P46779 137 aaKnown RBP7.72□□□□□ -1.17
SH3RF1-203ENST00000508685 TRGV4A0A0C4DH28 118 aa7.71□□□□□ -1.17
SH3RF1-203ENST00000508685 DEFB4AO15263 64 aa7.71□□□□□ -1.17
SH3RF1-203ENST00000508685 WIPF1O43516 503 aa7.71□□□□□ -1.17
SH3RF1-203ENST00000508685 OXLD1Q5BKU9 147 aa7.71□□□□□ -1.17
SH3RF1-203ENST00000508685 TRBV7-7A0A0K0K1E9 115 aa7.71□□□□□ -1.18
SH3RF1-203ENST00000508685 INAFM2P0DMQ5 153 aa7.71□□□□□ -1.18
SH3RF1-203ENST00000508685 NOTCH1P46531 2555 aa7.7□□□□□ -1.18
SH3RF1-203ENST00000508685 A0A0U1RRA0 63 aa7.7□□□□□ -1.18
SH3RF1-203ENST00000508685 CRPP02741 224 aa7.7□□□□□ -1.18
SH3RF1-203ENST00000508685 BAALC-AS2P0C853 105 aa7.7□□□□□ -1.18
SH3RF1-203ENST00000508685 IGHV4-30-4P0DP06 118 aa7.7□□□□□ -1.18
SH3RF1-203ENST00000508685 FHL2Q14192 279 aa7.7□□□□□ -1.18
SH3RF1-203ENST00000508685 TRBV6-8A0A0A6YYG3 113 aa7.69□□□□□ -1.18
SH3RF1-203ENST00000508685 IBA57-AS1B1ANH7 110 aa7.69□□□□□ -1.18
SH3RF1-203ENST00000508685 H0YGX0 51 aa7.69□□□□□ -1.18
SH3RF1-203ENST00000508685 NHLRC4P0CG21 123 aaPredicted RBP7.69□□□□□ -1.18
SH3RF1-203ENST00000508685 APOC4P55056 127 aa7.69□□□□□ -1.18
SH3RF1-203ENST00000508685 KIR2DL5BQ8NHK3 375 aa7.69□□□□□ -1.18
SH3RF1-203ENST00000508685 NBEAL1Q6ZS30 2694 aa7.68□□□□□ -1.18
SH3RF1-203ENST00000508685 LINC00612Q8N6U2 182 aa7.68□□□□□ -1.18
SH3RF1-203ENST00000508685 MGAM2Q2M2H8 2515 aa7.68□□□□□ -1.18
SH3RF1-203ENST00000508685 FBN3Q75N90 2809 aa7.68□□□□□ -1.18
SH3RF1-203ENST00000508685 A0A087WZ39 114 aa7.68□□□□□ -1.18
SH3RF1-203ENST00000508685 SMIM9A6NGZ8 99 aa7.68□□□□□ -1.18
SH3RF1-203ENST00000508685 KRTAP10-11P60412 298 aa7.68□□□□□ -1.18
SH3RF1-203ENST00000508685 LINC00643Q86TS7 51 aa7.68□□□□□ -1.18
SH3RF1-203ENST00000508685 SND1-IT1Q9HBX3 110 aa7.68□□□□□ -1.18
SH3RF1-203ENST00000508685 IGHV3OR16-9A0A0B4J2B5 98 aa7.67□□□□□ -1.18
SH3RF1-203ENST00000508685 IGHV4-28A0A0C4DH34 117 aa7.67□□□□□ -1.18
SH3RF1-203ENST00000508685 LINC01561Q8N1V8 128 aa7.67□□□□□ -1.18
SH3RF1-203ENST00000508685 MIR7-3HGQ8N6C7 128 aa7.67□□□□□ -1.18
SH3RF1-203ENST00000508685 LINC00158P58513 81 aa7.66□□□□□ -1.18
SH3RF1-203ENST00000508685 CHCHD5Q9BSY4 110 aa7.66□□□□□ -1.18
SH3RF1-203ENST00000508685 DNAL4O96015 105 aa7.65□□□□□ -1.18
SH3RF1-203ENST00000508685 MALP21145 153 aa7.65□□□□□ -1.18
SH3RF1-203ENST00000508685 SDIM1Q6ZPB5 146 aa7.65□□□□□ -1.18
SH3RF1-203ENST00000508685 Q8NAQ8 132 aa7.65□□□□□ -1.18
SH3RF1-203ENST00000508685 TOMM7Q9P0U1 55 aa7.65□□□□□ -1.18
SH3RF1-203ENST00000508685 A0A1B0GUV1 79 aa7.64□□□□□ -1.19
SH3RF1-203ENST00000508685 CELA1Q9UNI1 258 aa7.64□□□□□ -1.19
SH3RF1-203ENST00000508685 TENM3Q9P273 2699 aa7.64□□□□□ -1.19
SH3RF1-203ENST00000508685 DNAH3Q8TD57 4116 aa7.64□□□□□ -1.19
SH3RF1-203ENST00000508685 LYRM9A8MSI8 78 aa7.64□□□□□ -1.19
SH3RF1-203ENST00000508685 ATP5G1P05496 136 aa7.64□□□□□ -1.19
SH3RF1-203ENST00000508685 CXCL5P42830 114 aa7.64□□□□□ -1.19
SH3RF1-203ENST00000508685 LINC00337Q8N6G1 96 aa7.64□□□□□ -1.19
SH3RF1-203ENST00000508685 IGLV4-60A0A075B6I1 120 aa7.63□□□□□ -1.19
SH3RF1-203ENST00000508685 IGKV2-28A0A075B6P5 120 aa7.63□□□□□ -1.19
SH3RF1-203ENST00000508685 IGKV2D-28P01615 120 aa7.63□□□□□ -1.19
SH3RF1-203ENST00000508685 GYPEP15421 78 aa7.63□□□□□ -1.19
SH3RF1-203ENST00000508685 CCL18P55774 89 aa7.63□□□□□ -1.19
SH3RF1-203ENST00000508685 SS18Q15532 418 aa7.63□□□□□ -1.19
SH3RF1-203ENST00000508685 LINC00959A0A1B0GUT2 108 aa7.62□□□□□ -1.19
SH3RF1-203ENST00000508685 B5MCH6 92 aa7.62□□□□□ -1.19
SH3RF1-203ENST00000508685 MIFP14174 115 aa7.62□□□□□ -1.19
SH3RF1-203ENST00000508685 FAM218AQ96MZ4 157 aa7.62□□□□□ -1.19
SH3RF1-203ENST00000508685 A0A096LPF7 62 aa7.62□□□□□ -1.19
SH3RF1-203ENST00000508685 C6orf226Q5I0X4 101 aa7.62□□□□□ -1.19
SH3RF1-203ENST00000508685 SMIM11BQ8TCY0 68 aa7.62□□□□□ -1.19
SH3RF1-203ENST00000508685 PRO0255Q9UI72 69 aa7.62□□□□□ -1.19
SH3RF1-203ENST00000508685 DAD1P61803 113 aa7.61□□□□□ -1.19
SH3RF1-203ENST00000508685 EGFEM1PQ0D2K5 195 aa7.61□□□□□ -1.19
SH3RF1-203ENST00000508685 Q8IZM0 81 aa7.61□□□□□ -1.19
SH3RF1-203ENST00000508685 IGKV3OR2-268A0A0C4DH90 116 aa7.61□□□□□ -1.19
SH3RF1-203ENST00000508685 RETNQ9HD89 108 aa7.61□□□□□ -1.19
SH3RF1-203ENST00000508685 C22orf24Q9Y442 160 aa7.61□□□□□ -1.19
SH3RF1-203ENST00000508685 A0A1B0GX51 115 aa7.6□□□□□ -1.19
SH3RF1-203ENST00000508685 CCDC179H3BU77 68 aa7.6□□□□□ -1.19
SH3RF1-203ENST00000508685 PAX4O43316 350 aa7.59□□□□□ -1.19
SH3RF1-203ENST00000508685 C5orf38Q86SI9 138 aa7.59□□□□□ -1.19
SH3RF1-203ENST00000508685 COX17Q14061 63 aa7.59□□□□□ -1.19
SH3RF1-203ENST00000508685 OBSCN-AS1Q96MR7 158 aa7.59□□□□□ -1.19
SH3RF1-203ENST00000508685 SPART-AS1P0CW21 52 aa7.58□□□□□ -1.2
SH3RF1-203ENST00000508685 HTN3P15516 51 aa7.58□□□□□ -1.2
SH3RF1-203ENST00000508685 NDUFC2O95298 119 aa7.57□□□□□ -1.2
SH3RF1-203ENST00000508685 PFN2P35080 140 aa7.57□□□□□ -1.2
SH3RF1-203ENST00000508685 GAGE2AQ6NT46 116 aa7.57□□□□□ -1.2
SH3RF1-203ENST00000508685 SVIPQ8NHG7 77 aa7.57□□□□□ -1.2
SH3RF1-203ENST00000508685 TMEM126AQ9H061 195 aa7.57□□□□□ -1.2
SH3RF1-203ENST00000508685 Q9HAA7 133 aa7.57□□□□□ -1.2
SH3RF1-203ENST00000508685 SS18L2Q9UHA2 77 aa7.57□□□□□ -1.2
SH3RF1-203ENST00000508685 OR13C6PQ8NH95 151 aa7.57□□□□□ -1.2
SH3RF1-203ENST00000508685 SMCR5Q8TEV8 140 aa7.57□□□□□ -1.2
SH3RF1-203ENST00000508685 A0A087WYN8 130 aa7.56□□□□□ -1.2
SH3RF1-203ENST00000508685 FAM236AA0A1B0GUQ0 79 aa7.56□□□□□ -1.2
SH3RF1-203ENST00000508685 FAM236BA0A1B0GV22 79 aa7.56□□□□□ -1.2
SH3RF1-203ENST00000508685 MUC7Q8TAX7 377 aa7.56□□□□□ -1.2
SH3RF1-203ENST00000508685 ORMDL1Q9P0S3 153 aa7.56□□□□□ -1.2
SH3RF1-203ENST00000508685 KLK5Q9Y337 293 aaPredicted RBP7.56□□□□□ -1.2
SH3RF1-203ENST00000508685 LECT2O14960 151 aa7.55□□□□□ -1.2
SH3RF1-203ENST00000508685 PRB2P02812 416 aaPredicted RBP7.55□□□□□ -1.2
SH3RF1-203ENST00000508685 XCL1P47992 114 aa7.55□□□□□ -1.2
SH3RF1-203ENST00000508685 CD164L2Q6UWJ8 174 aa7.55□□□□□ -1.2
SH3RF1-203ENST00000508685 LINC00167Q96N53 147 aa7.54□□□□□ -1.2
SH3RF1-203ENST00000508685 MEGF8Q7Z7M0 2845 aa7.54□□□□□ -1.2
SH3RF1-203ENST00000508685 JMJD7-PLA2G4BH0Y9G9 81 aa7.54□□□□□ -1.2
SH3RF1-203ENST00000508685 CFAP161Q6P656 301 aa7.54□□□□□ -1.2
SH3RF1-203ENST00000508685 UQCRQO14949 82 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms