RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 ABCA12Q86UK0 2595 aa5.14□□□□□ -1.59
LIMCH1-207ENST00000508466 MTORP42345 2549 aa5.14□□□□□ -1.59
LIMCH1-207ENST00000508466 LOC100131303A0A0U1RQF7 123 aa5.14□□□□□ -1.59
LIMCH1-207ENST00000508466 NDUFC2O95298 119 aa5.14□□□□□ -1.59
LIMCH1-207ENST00000508466 DEFB136Q30KP8 78 aa5.14□□□□□ -1.59
LIMCH1-207ENST00000508466 FAM208BQ5VWN6 2430 aa5.14□□□□□ -1.59
LIMCH1-207ENST00000508466 FLNCQ14315 2725 aa5.13□□□□□ -1.59
LIMCH1-207ENST00000508466 C5orf56Q8N8D9 126 aa5.13□□□□□ -1.59
LIMCH1-207ENST00000508466 LAMTOR3Q9UHA4 124 aa5.13□□□□□ -1.59
LIMCH1-207ENST00000508466 PDZD2O15018 2839 aa5.13□□□□□ -1.59
LIMCH1-207ENST00000508466 MED14OSP0DP75 135 aa5.13□□□□□ -1.59
LIMCH1-207ENST00000508466 DEFB131AP59861 70 aa5.13□□□□□ -1.59
LIMCH1-207ENST00000508466 C9orf116Q5BN46 136 aaPredicted RBP5.13□□□□□ -1.59
LIMCH1-207ENST00000508466 MOB4Q9Y3A3 225 aa5.13□□□□□ -1.59
LIMCH1-207ENST00000508466 TRAV13-2A0A0B4J235 113 aa5.12□□□□□ -1.59
LIMCH1-207ENST00000508466 SMIM26A0A096LP01 95 aa5.12□□□□□ -1.59
LIMCH1-207ENST00000508466 NDUFA4O00483 81 aa5.12□□□□□ -1.59
LIMCH1-207ENST00000508466 FAM222AQ5U5X8 452 aa5.12□□□□□ -1.59
LIMCH1-207ENST00000508466 UBL5Q9BZL1 73 aa5.12□□□□□ -1.59
LIMCH1-207ENST00000508466 TRGV1A0A0A0MS02 117 aa5.12□□□□□ -1.59
LIMCH1-207ENST00000508466 NTM-AS1Q6ZSK4 140 aa5.12□□□□□ -1.59
LIMCH1-207ENST00000508466 Q8N3U1 123 aa5.12□□□□□ -1.59
LIMCH1-207ENST00000508466 CACNA1AO00555 2505 aa5.11□□□□□ -1.59
LIMCH1-207ENST00000508466 H3BUX3 64 aa5.11□□□□□ -1.59
LIMCH1-207ENST00000508466 A0A096LPF7 62 aa5.11□□□□□ -1.59
LIMCH1-207ENST00000508466 IGLV5-39A0A0G2JS06 123 aa5.1□□□□□ -1.59
LIMCH1-207ENST00000508466 NDUFC2-KCTD14E9PQ53 114 aa5.1□□□□□ -1.59
LIMCH1-207ENST00000508466 UBR5O95071 2799 aaPredicted RBP5.1□□□□□ -1.59
LIMCH1-207ENST00000508466 IGHV4-38-2P0DP08 117 aa5.1□□□□□ -1.59
LIMCH1-207ENST00000508466 IGFL2Q6UWQ7 119 aa5.1□□□□□ -1.59
LIMCH1-207ENST00000508466 A0A1W2PPR1 153 aa5.1□□□□□ -1.59
LIMCH1-207ENST00000508466 LINC01547P58512 204 aaPredicted RBP5.1□□□□□ -1.59
LIMCH1-207ENST00000508466 C18orf65Q6ZTR6 163 aa5.1□□□□□ -1.59
LIMCH1-207ENST00000508466 BBC3Q96PG8 261 aaPredicted RBP5.1□□□□□ -1.59
LIMCH1-207ENST00000508466 HIVEP2P31629 2446 aa5.09□□□□□ -1.59
LIMCH1-207ENST00000508466 IGLV4-60A0A075B6I1 120 aa5.09□□□□□ -1.59
LIMCH1-207ENST00000508466 C11orf44Q8N8P7 122 aa5.09□□□□□ -1.59
LIMCH1-207ENST00000508466 CELA1Q9UNI1 258 aa5.09□□□□□ -1.59
LIMCH1-207ENST00000508466 A0A096LNT2 108 aa5.09□□□□□ -1.6
LIMCH1-207ENST00000508466 TRBV10-1A0A0K0K1A3 114 aa5.09□□□□□ -1.6
LIMCH1-207ENST00000508466 K7EQG2 157 aa5.09□□□□□ -1.6
LIMCH1-207ENST00000508466 C6orf226Q5I0X4 101 aa5.09□□□□□ -1.6
LIMCH1-207ENST00000508466 IGLV10-54A0A075B6I4 117 aa5.08□□□□□ -1.6
LIMCH1-207ENST00000508466 UBE2L6O14933 153 aa5.08□□□□□ -1.6
LIMCH1-207ENST00000508466 MIFP14174 115 aa5.08□□□□□ -1.6
LIMCH1-207ENST00000508466 C6orf99Q4VX62 202 aa5.08□□□□□ -1.6
LIMCH1-207ENST00000508466 HIGD2AQ9BW72 106 aa5.08□□□□□ -1.6
LIMCH1-207ENST00000508466 OXLD1Q5BKU9 147 aa5.08□□□□□ -1.6
LIMCH1-207ENST00000508466 TRAV7A0A075B6U4 112 aa5.07□□□□□ -1.6
LIMCH1-207ENST00000508466 Q6ZVQ6 151 aa5.07□□□□□ -1.6
LIMCH1-207ENST00000508466 Q8N814 137 aa5.07□□□□□ -1.6
LIMCH1-207ENST00000508466 CDC42SE2Q9NRR3 84 aa5.07□□□□□ -1.6
LIMCH1-207ENST00000508466 BAHCC1Q9P281 2608 aa5.07□□□□□ -1.6
LIMCH1-207ENST00000508466 IGHV4-28A0A0C4DH34 117 aa5.07□□□□□ -1.6
LIMCH1-207ENST00000508466 BPY2O14599 106 aa5.07□□□□□ -1.6
LIMCH1-207ENST00000508466 MAPK1IP1LQ8NDC0 245 aa5.07□□□□□ -1.6
LIMCH1-207ENST00000508466 UNC79Q9P2D8 2635 aa5.06□□□□□ -1.6
LIMCH1-207ENST00000508466 H0YGX0 51 aa5.06□□□□□ -1.6
LIMCH1-207ENST00000508466 Q8NDZ9 215 aa5.06□□□□□ -1.6
LIMCH1-207ENST00000508466 OBSCN-AS1Q96MR7 158 aa5.06□□□□□ -1.6
LIMCH1-207ENST00000508466 MINOS1-NBL1R4GNA1 71 aa5.06□□□□□ -1.6
LIMCH1-207ENST00000508466 OTOGQ6ZRI0 2925 aa5.06□□□□□ -1.6
LIMCH1-207ENST00000508466 IGLV5-45A0A087WSX0 123 aa5.05□□□□□ -1.6
LIMCH1-207ENST00000508466 LINC01006Q8NI28 216 aa5.05□□□□□ -1.6
LIMCH1-207ENST00000508466 ACANP16112 2415 aa5.05□□□□□ -1.6
LIMCH1-207ENST00000508466 SLURP1P55000 103 aa5.05□□□□□ -1.6
LIMCH1-207ENST00000508466 PMAIP1Q13794 54 aa5.05□□□□□ -1.6
LIMCH1-207ENST00000508466 LINC00269Q8N2A0 174 aa5.05□□□□□ -1.6
LIMCH1-207ENST00000508466 LINC01356Q8N9X3 169 aa5.05□□□□□ -1.6
LIMCH1-207ENST00000508466 Q8NA96 180 aa5.05□□□□□ -1.6
LIMCH1-207ENST00000508466 ESM1Q9NQ30 184 aa5.05□□□□□ -1.6
LIMCH1-207ENST00000508466 NREPQ16612 68 aa5.04□□□□□ -1.6
LIMCH1-207ENST00000508466 TMEM254Q8TBM7 123 aa5.04□□□□□ -1.6
LIMCH1-207ENST00000508466 NOP10Q9NPE3 64 aaKnown RBP5.04□□□□□ -1.6
LIMCH1-207ENST00000508466 FAM30AQ9NZY2 134 aa5.04□□□□□ -1.6
LIMCH1-207ENST00000508466 GNLYP22749 145 aa5.04□□□□□ -1.6
LIMCH1-207ENST00000508466 COPS9Q8WXC6 57 aa5.04□□□□□ -1.6
LIMCH1-207ENST00000508466 EPM2AB3EWF7 344 aa5.03□□□□□ -1.6
LIMCH1-207ENST00000508466 Q6ZQY7 126 aa5.03□□□□□ -1.6
LIMCH1-207ENST00000508466 TRBV6-4A0A1B0GX49 114 aa5.03□□□□□ -1.6
LIMCH1-207ENST00000508466 C3orf84H3BNL1 204 aa5.03□□□□□ -1.6
LIMCH1-207ENST00000508466 KLKP1Q107X0 134 aa5.03□□□□□ -1.6
LIMCH1-207ENST00000508466 C10orf25Q5T742 122 aa5.03□□□□□ -1.6
LIMCH1-207ENST00000508466 SPTSSBQ8NFR3 76 aa5.03□□□□□ -1.6
LIMCH1-207ENST00000508466 TMEM256-PLSCR3K7ERE1 68 aa5.02□□□□□ -1.61
LIMCH1-207ENST00000508466 IGFL3Q6UXB1 125 aa5.02□□□□□ -1.61
LIMCH1-207ENST00000508466 CSMD3Q7Z407 3707 aa5.02□□□□□ -1.61
LIMCH1-207ENST00000508466 TRGV2A0A075B6R0 118 aa5.02□□□□□ -1.61
LIMCH1-207ENST00000508466 IGHV4-59P01825 116 aa5.02□□□□□ -1.61
LIMCH1-207ENST00000508466 FUSP35637 526 aaKnown RBP eCLIP5.02□□□□□ -1.61
LIMCH1-207ENST00000508466 DEFB116Q30KQ4 102 aa5.02□□□□□ -1.61
LIMCH1-207ENST00000508466 LMO4P61968 165 aa5.01□□□□□ -1.61
LIMCH1-207ENST00000508466 Q6ZQT0 140 aa5.01□□□□□ -1.61
LIMCH1-207ENST00000508466 WFDC10AQ9H1F0 79 aa5.01□□□□□ -1.61
LIMCH1-207ENST00000508466 PKD1L1Q8TDX9 2849 aa5.01□□□□□ -1.61
LIMCH1-207ENST00000508466 JMJD7-PLA2G4BH0Y9G9 81 aa5.01□□□□□ -1.61
LIMCH1-207ENST00000508466 PF4P02776 101 aa5.01□□□□□ -1.61
LIMCH1-207ENST00000508466 C6orf223Q8N319 242 aa5.01□□□□□ -1.61
LIMCH1-207ENST00000508466 USMG5Q96IX5 58 aa5□□□□□ -1.61
LIMCH1-207ENST00000508466 KLK12Q9UKR0 248 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms