RNA–Protein interactions for RNA: ENST00000506197.2

SMIM20-201, Transcript of small integral membrane protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM20, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-201ENST00000506197 APOBP04114 4563 aaKnown RBP13.1□□□□□ -0.31
SMIM20-201ENST00000506197 KIAA0087Q14695 138 aa13.09□□□□□ -0.31
SMIM20-201ENST00000506197 IGLV5-52A0A0A0MRZ9 124 aa13.08□□□□□ -0.32
SMIM20-201ENST00000506197 NDUFA1O15239 70 aa13.08□□□□□ -0.32
SMIM20-201ENST00000506197 CDK2AP2O75956 126 aa13.08□□□□□ -0.32
SMIM20-201ENST00000506197 CXCL5P42830 114 aa13.08□□□□□ -0.32
SMIM20-201ENST00000506197 CNBPP62633 177 aaKnown RBP13.08□□□□□ -0.32
SMIM20-201ENST00000506197 SYCNQ0VAF6 134 aa13.08□□□□□ -0.32
SMIM20-201ENST00000506197 CARD19Q96LW7 228 aa13.08□□□□□ -0.32
SMIM20-201ENST00000506197 LEPROTO15243 131 aa13.07□□□□□ -0.32
SMIM20-201ENST00000506197 JOSD1Q15040 202 aaPredicted RBP13.07□□□□□ -0.32
SMIM20-201ENST00000506197 STPG4Q8N801 248 aa13.07□□□□□ -0.32
SMIM20-201ENST00000506197 PLEKHB2Q96CS7 222 aa13.07□□□□□ -0.32
SMIM20-201ENST00000506197 PGPEP1Q9NXJ5 209 aa13.07□□□□□ -0.32
SMIM20-201ENST00000506197 HSBP1L1C9JCN9 74 aa13.06□□□□□ -0.32
SMIM20-201ENST00000506197 E9PLD3 99 aa13.05□□□□□ -0.32
SMIM20-201ENST00000506197 SLPIP03973 132 aa13.05□□□□□ -0.32
SMIM20-201ENST00000506197 KRTAP10-2P60368 255 aa13.05□□□□□ -0.32
SMIM20-201ENST00000506197 CDPF1Q6NVV7 123 aa13.05□□□□□ -0.32
SMIM20-201ENST00000506197 C2orf82Q6UX34 121 aa13.05□□□□□ -0.32
SMIM20-201ENST00000506197 FUSP35637 526 aaKnown RBP eCLIP13.04□□□□□ -0.32
SMIM20-201ENST00000506197 UNQ6190/PRO20217Q6UXQ8 127 aa13.04□□□□□ -0.32
SMIM20-201ENST00000506197 Q6ZRU5 148 aa13.04□□□□□ -0.32
SMIM20-201ENST00000506197 J3QQQ9 107 aa13.03□□□□□ -0.32
SMIM20-201ENST00000506197 LGALS3P17931 250 aaKnown RBP13.03□□□□□ -0.32
SMIM20-201ENST00000506197 SFTA2Q6UW10 78 aa13.03□□□□□ -0.32
SMIM20-201ENST00000506197 TRBV30A0A0K0K1B3 111 aa13.01□□□□□ -0.33
SMIM20-201ENST00000506197 C10orf25Q5T742 122 aa13.01□□□□□ -0.33
SMIM20-201ENST00000506197 C9orf163Q8N9P6 203 aa13.01□□□□□ -0.33
SMIM20-201ENST00000506197 KRTAP4-5Q9BYR2 181 aa13.01□□□□□ -0.33
SMIM20-201ENST00000506197 TSPEAR-AS2P59090 65 aa13□□□□□ -0.33
SMIM20-201ENST00000506197 RNF151Q2KHN1 245 aa13□□□□□ -0.33
SMIM20-201ENST00000506197 MAJINQ3KP22 176 aa13□□□□□ -0.33
SMIM20-201ENST00000506197 ANKRD39Q53RE8 183 aa13□□□□□ -0.33
SMIM20-201ENST00000506197 NDUFA12Q9UI09 145 aa13□□□□□ -0.33
SMIM20-201ENST00000506197 MYMXA0A1B0GTQ4 84 aa12.99□□□□□ -0.33
SMIM20-201ENST00000506197 PYY3Q5JQD4 70 aa12.99□□□□□ -0.33
SMIM20-201ENST00000506197 C6orf48Q9UBA6 75 aa12.99□□□□□ -0.33
SMIM20-201ENST00000506197 PKIGQ9Y2B9 76 aa12.99□□□□□ -0.33
SMIM20-201ENST00000506197 NMUP48645 174 aa12.98□□□□□ -0.33
SMIM20-201ENST00000506197 IGKV2D-26A0A0A0MRZ7 120 aa12.97□□□□□ -0.33
SMIM20-201ENST00000506197 GCSHP23434 173 aa12.97□□□□□ -0.33
SMIM20-201ENST00000506197 ZNF625Q96I27 306 aaPredicted RBP12.97□□□□□ -0.33
SMIM20-201ENST00000506197 VAMP8Q9BV40 100 aa12.97□□□□□ -0.33
SMIM20-201ENST00000506197 HERV-K104P63124 156 aa12.96□□□□□ -0.33
SMIM20-201ENST00000506197 LINC01620Q4KN68 170 aa12.96□□□□□ -0.33
SMIM20-201ENST00000506197 LOC105371267A0A1B0GV96 52 aa12.95□□□□□ -0.34
SMIM20-201ENST00000506197 LOC107984640A0A0U1RRK4 108 aa12.94□□□□□ -0.34
SMIM20-201ENST00000506197 C9orf116Q5BN46 136 aaPredicted RBP12.94□□□□□ -0.34
SMIM20-201ENST00000506197 ZNF815PA8K554 130 aa12.93□□□□□ -0.34
SMIM20-201ENST00000506197 MEIG1Q5JSS6 88 aa12.93□□□□□ -0.34
SMIM20-201ENST00000506197 PAM16Q9Y3D7 125 aa12.93□□□□□ -0.34
SMIM20-201ENST00000506197 RPL18AQ02543 176 aaKnown RBP12.92□□□□□ -0.34
SMIM20-201ENST00000506197 Q8N1X5 172 aa12.92□□□□□ -0.34
SMIM20-201ENST00000506197 ERG28Q9UKR5 140 aa12.92□□□□□ -0.34
SMIM20-201ENST00000506197 SPATA45Q537H7 98 aa12.91□□□□□ -0.34
SMIM20-201ENST00000506197 LINC00587B1AMM8 73 aa12.9□□□□□ -0.34
SMIM20-201ENST00000506197 NDUFC2-KCTD14E9PQ53 114 aa12.9□□□□□ -0.34
SMIM20-201ENST00000506197 TLX1NBP0CAT3 122 aa12.9□□□□□ -0.34
SMIM20-201ENST00000506197 PFN2P35080 140 aa12.9□□□□□ -0.34
SMIM20-201ENST00000506197 COX17Q14061 63 aa12.9□□□□□ -0.34
SMIM20-201ENST00000506197 SDIM1Q6ZPB5 146 aa12.9□□□□□ -0.34
SMIM20-201ENST00000506197 TTTY13Q9BZ97 58 aa12.9□□□□□ -0.34
SMIM20-201ENST00000506197 S100A12P80511 92 aa12.89□□□□□ -0.35
SMIM20-201ENST00000506197 GAGE2BQ13066 116 aa12.89□□□□□ -0.35
SMIM20-201ENST00000506197 PCP2Q8IVA1 136 aa12.89□□□□□ -0.35
SMIM20-201ENST00000506197 SMIM6P0DI80 62 aa12.88□□□□□ -0.35
SMIM20-201ENST00000506197 LINC00158P58513 81 aa12.88□□□□□ -0.35
SMIM20-201ENST00000506197 KRTAP10-1P60331 282 aa12.87□□□□□ -0.35
SMIM20-201ENST00000506197 CIRBPQ14011 172 aaKnown RBP12.87□□□□□ -0.35
SMIM20-201ENST00000506197 A0A096LNI7 61 aa12.86□□□□□ -0.35
SMIM20-201ENST00000506197 IGKV2-24A0A0C4DH68 120 aa12.86□□□□□ -0.35
SMIM20-201ENST00000506197 A0A0J9YXY3 114 aa12.86□□□□□ -0.35
SMIM20-201ENST00000506197 A0A0U1RRA0 63 aa12.86□□□□□ -0.35
SMIM20-201ENST00000506197 SMIM13P0DJ93 91 aa12.86□□□□□ -0.35
SMIM20-201ENST00000506197 GAGE2EQ4V326 116 aa12.86□□□□□ -0.35
SMIM20-201ENST00000506197 SCGB1D4Q6XE38 83 aa12.86□□□□□ -0.35
SMIM20-201ENST00000506197 Q6ZRP5 223 aa12.86□□□□□ -0.35
SMIM20-201ENST00000506197 GAGE2DQ9UEU5 116 aa12.86□□□□□ -0.35
SMIM20-201ENST00000506197 PTTG1IPP53801 180 aa12.85□□□□□ -0.35
SMIM20-201ENST00000506197 LINC00474Q9P2X8 69 aa12.85□□□□□ -0.35
SMIM20-201ENST00000506197 COX8AP10176 69 aa12.84□□□□□ -0.35
SMIM20-201ENST00000506197 CHTF8P0CG12 524 aa12.83□□□□□ -0.36
SMIM20-201ENST00000506197 DPH3Q96FX2 82 aa12.82□□□□□ -0.36
SMIM20-201ENST00000506197 VPS13BQ7Z7G8 4022 aa12.81□□□□□ -0.36
SMIM20-201ENST00000506197 C14orf144Q96I85 54 aa12.81□□□□□ -0.36
SMIM20-201ENST00000506197 DNAH8Q96JB1 4490 aa12.81□□□□□ -0.36
SMIM20-201ENST00000506197 TIMM17BO60830 172 aa12.8□□□□□ -0.36
SMIM20-201ENST00000506197 BOD1L2Q8IYS8 172 aa12.8□□□□□ -0.36
SMIM20-201ENST00000506197 MIR7-3HGQ8N6C7 128 aa12.8□□□□□ -0.36
SMIM20-201ENST00000506197 SPACA4Q8TDM5 124 aa12.8□□□□□ -0.36
SMIM20-201ENST00000506197 XAGE1AQ9HD64 81 aa12.8□□□□□ -0.36
SMIM20-201ENST00000506197 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.8□□□□□ -0.36
SMIM20-201ENST00000506197 FAT1Q14517 4588 aa12.8□□□□□ -0.36
SMIM20-201ENST00000506197 TMEM238C9JI98 176 aa12.79□□□□□ -0.36
SMIM20-201ENST00000506197 SLC25A34Q6PIV7 304 aa12.79□□□□□ -0.36
SMIM20-201ENST00000506197 SND1-IT1Q9HBX3 110 aa12.79□□□□□ -0.36
SMIM20-201ENST00000506197 EPM2AB3EWF7 344 aa12.78□□□□□ -0.36
SMIM20-201ENST00000506197 DLEU1O43261 78 aa12.78□□□□□ -0.36
SMIM20-201ENST00000506197 XGP55808 180 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms