RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 CKS2P33552 79 aa5.31□□□□□ -1.56
PTPN20-216ENST00000506080 RPL32P62910 135 aaKnown RBP5.31□□□□□ -1.56
PTPN20-216ENST00000506080 MRPL55Q7Z7F7 128 aaKnown RBP5.31□□□□□ -1.56
PTPN20-216ENST00000506080 SMIM7Q9BQ49 75 aa5.31□□□□□ -1.56
PTPN20-216ENST00000506080 OSTCQ9NRP0 149 aa5.31□□□□□ -1.56
PTPN20-216ENST00000506080 IGLV4-3A0A075B6K6 122 aa5.3□□□□□ -1.56
PTPN20-216ENST00000506080 TRBV24-1A0A075B6N3 115 aa5.3□□□□□ -1.56
PTPN20-216ENST00000506080 LINC00862A6NCI5 91 aa5.3□□□□□ -1.56
PTPN20-216ENST00000506080 RPL37AP8A6NKH3 93 aa5.3□□□□□ -1.56
PTPN20-216ENST00000506080 PRSS2P07478 247 aa5.3□□□□□ -1.56
PTPN20-216ENST00000506080 IFI27P40305 119 aaPredicted RBP5.3□□□□□ -1.56
PTPN20-216ENST00000506080 CKS1BP61024 79 aa5.3□□□□□ -1.56
PTPN20-216ENST00000506080 SLC51BQ86UW2 128 aa5.3□□□□□ -1.56
PTPN20-216ENST00000506080 V9GYV3 84 aa5.3□□□□□ -1.56
PTPN20-216ENST00000506080 GAGE10A6NGK3 116 aa5.29□□□□□ -1.56
PTPN20-216ENST00000506080 NPYP01303 97 aa5.29□□□□□ -1.56
PTPN20-216ENST00000506080 LINC01547P58512 204 aaPredicted RBP5.29□□□□□ -1.56
PTPN20-216ENST00000506080 C6orf226Q5I0X4 101 aa5.29□□□□□ -1.56
PTPN20-216ENST00000506080 ZC2HC1BQ5TFG8 222 aa5.29□□□□□ -1.56
PTPN20-216ENST00000506080 LINC00167Q96N53 147 aa5.29□□□□□ -1.56
PTPN20-216ENST00000506080 PPDPFQ9H3Y8 114 aa5.29□□□□□ -1.56
PTPN20-216ENST00000506080 BATF3Q9NR55 127 aa5.29□□□□□ -1.56
PTPN20-216ENST00000506080 TP73-AS1Q9UF72 201 aa5.29□□□□□ -1.56
PTPN20-216ENST00000506080 D6R8Y8 96 aa5.28□□□□□ -1.56
PTPN20-216ENST00000506080 UBE2AP49459 152 aa5.28□□□□□ -1.56
PTPN20-216ENST00000506080 LINC01561Q8N1V8 128 aa5.28□□□□□ -1.56
PTPN20-216ENST00000506080 TMEM141Q96I45 108 aa5.28□□□□□ -1.56
PTPN20-216ENST00000506080 NAT8BQ9UHF3 227 aa5.28□□□□□ -1.56
PTPN20-216ENST00000506080 IGKV2D-26A0A0A0MRZ7 120 aa5.27□□□□□ -1.57
PTPN20-216ENST00000506080 FAM229BQ4G0N7 80 aa5.27□□□□□ -1.57
PTPN20-216ENST00000506080 Q6ZN92 141 aa5.27□□□□□ -1.57
PTPN20-216ENST00000506080 TEX43Q6ZNM6 134 aa5.27□□□□□ -1.57
PTPN20-216ENST00000506080 EIF5A2Q9GZV4 153 aaKnown RBP5.27□□□□□ -1.57
PTPN20-216ENST00000506080 PYGO1Q9Y3Y4 419 aa5.27□□□□□ -1.57
PTPN20-216ENST00000506080 RAB5AP20339 215 aa5.26□□□□□ -1.57
PTPN20-216ENST00000506080 BLOC1S1P78537 153 aa5.26□□□□□ -1.57
PTPN20-216ENST00000506080 FAM74A3Q4VXF1 159 aa5.26□□□□□ -1.57
PTPN20-216ENST00000506080 KRTAP13-1Q8IUC0 172 aa5.26□□□□□ -1.57
PTPN20-216ENST00000506080 Q8IZM0 81 aa5.26□□□□□ -1.57
PTPN20-216ENST00000506080 ALKBH7Q9BT30 221 aaPredicted RBP5.26□□□□□ -1.57
PTPN20-216ENST00000506080 MRPL54Q6P161 138 aaKnown RBP5.25□□□□□ -1.57
PTPN20-216ENST00000506080 ALKAL2Q6UX46 152 aa5.25□□□□□ -1.57
PTPN20-216ENST00000506080 C2orf88Q9BSF0 95 aa5.25□□□□□ -1.57
PTPN20-216ENST00000506080 KRTAP4-1Q9BYQ7 146 aa5.25□□□□□ -1.57
PTPN20-216ENST00000506080 F8VRH5 84 aa5.24□□□□□ -1.57
PTPN20-216ENST00000506080 C3orf22Q8N5N4 141 aa5.24□□□□□ -1.57
PTPN20-216ENST00000506080 A0A1B0GW15 77 aa5.23□□□□□ -1.57
PTPN20-216ENST00000506080 SMIM27A0A1W2PRY6 76 aa5.23□□□□□ -1.57
PTPN20-216ENST00000506080 B5MCH6 92 aa5.23□□□□□ -1.57
PTPN20-216ENST00000506080 SRP19P09132 144 aaKnown RBP5.23□□□□□ -1.57
PTPN20-216ENST00000506080 RPL23P62829 140 aaKnown RBP5.23□□□□□ -1.57
PTPN20-216ENST00000506080 PNRC1Q12796 327 aaPredicted RBP5.23□□□□□ -1.57
PTPN20-216ENST00000506080 LINC00337Q8N6G1 96 aa5.23□□□□□ -1.57
PTPN20-216ENST00000506080 IGKV2-28A0A075B6P5 120 aa5.23□□□□□ -1.57
PTPN20-216ENST00000506080 LOC389332A0A1B0GUA5 103 aa5.23□□□□□ -1.57
PTPN20-216ENST00000506080 F8W036 122 aa5.23□□□□□ -1.57
PTPN20-216ENST00000506080 SCO1O75880 301 aa5.23□□□□□ -1.57
PTPN20-216ENST00000506080 IGKV2D-28P01615 120 aa5.23□□□□□ -1.57
PTPN20-216ENST00000506080 PRLHP81277 87 aa5.23□□□□□ -1.57
PTPN20-216ENST00000506080 ADIRFQ15847 76 aa5.23□□□□□ -1.57
PTPN20-216ENST00000506080 ASB16-AS1Q495Z4 193 aa5.23□□□□□ -1.57
PTPN20-216ENST00000506080 NKAPP1Q8N9T2 125 aa5.23□□□□□ -1.57
PTPN20-216ENST00000506080 PRELID3AQ96N28 172 aa5.23□□□□□ -1.57
PTPN20-216ENST00000506080 AMELXQ99217 191 aa5.23□□□□□ -1.57
PTPN20-216ENST00000506080 VCX2Q9H322 139 aa5.23□□□□□ -1.57
PTPN20-216ENST00000506080 CDKN2A-AS1Q9UH64 79 aa5.23□□□□□ -1.57
PTPN20-216ENST00000506080 PPBPP02775 128 aa5.22□□□□□ -1.57
PTPN20-216ENST00000506080 S100A8P05109 93 aa5.22□□□□□ -1.57
PTPN20-216ENST00000506080 CTAG1AP78358 180 aa5.22□□□□□ -1.57
PTPN20-216ENST00000506080 C2orf66Q6UXQ4 117 aa5.22□□□□□ -1.57
PTPN20-216ENST00000506080 TMEM136Q6ZRR5 245 aa5.22□□□□□ -1.57
PTPN20-216ENST00000506080 FAM19A1Q7Z5A9 133 aa5.22□□□□□ -1.57
PTPN20-216ENST00000506080 ORMDL3Q8N138 153 aa5.22□□□□□ -1.57
PTPN20-216ENST00000506080 CYSLTR1Q9Y271 337 aa5.22□□□□□ -1.57
PTPN20-216ENST00000506080 IGLV5-37A0A075B6J1 123 aa5.21□□□□□ -1.58
PTPN20-216ENST00000506080 A0A1B0GXF2 115 aa5.21□□□□□ -1.58
PTPN20-216ENST00000506080 RAB5BP61020 215 aa5.21□□□□□ -1.58
PTPN20-216ENST00000506080 TCTE3Q8IZS6 198 aa5.21□□□□□ -1.58
PTPN20-216ENST00000506080 CXCL5P42830 114 aa5.2□□□□□ -1.58
PTPN20-216ENST00000506080 HERVK_113P63121 156 aa5.2□□□□□ -1.58
PTPN20-216ENST00000506080 KRTAP13-3Q3SY46 172 aa5.2□□□□□ -1.58
PTPN20-216ENST00000506080 FP248Q71RG6 208 aaPredicted RBP5.2□□□□□ -1.58
PTPN20-216ENST00000506080 FAM19A3Q7Z5A8 133 aa5.2□□□□□ -1.58
PTPN20-216ENST00000506080 GEMIN7Q9H840 131 aaKnown RBP5.2□□□□□ -1.58
PTPN20-216ENST00000506080 PLEKHB2Q96CS7 222 aa5.19□□□□□ -1.58
PTPN20-216ENST00000506080 MAP1LC3AQ9H492 121 aa5.19□□□□□ -1.58
PTPN20-216ENST00000506080 IGIPA6NJ69 53 aa5.18□□□□□ -1.58
PTPN20-216ENST00000506080 TMEM238C9JI98 176 aa5.18□□□□□ -1.58
PTPN20-216ENST00000506080 SEC61BP60468 96 aaKnown RBP5.18□□□□□ -1.58
PTPN20-216ENST00000506080 SEC11AP67812 179 aa5.18□□□□□ -1.58
PTPN20-216ENST00000506080 SPAG11AQ6PDA7 123 aa5.18□□□□□ -1.58
PTPN20-216ENST00000506080 COX7B2Q8TF08 81 aa5.18□□□□□ -1.58
PTPN20-216ENST00000506080 TMEM126AQ9H061 195 aa5.18□□□□□ -1.58
PTPN20-216ENST00000506080 NAT8Q9UHE5 227 aa5.18□□□□□ -1.58
PTPN20-216ENST00000506080 PRSS47A8MTI9 375 aa5.17□□□□□ -1.58
PTPN20-216ENST00000506080 SMIM1B2RUZ4 78 aa5.17□□□□□ -1.58
PTPN20-216ENST00000506080 CBLN2Q8IUK8 224 aa5.17□□□□□ -1.58
PTPN20-216ENST00000506080 Q8N8P6 123 aa5.17□□□□□ -1.58
PTPN20-216ENST00000506080 C9JQL5 133 aa5.16□□□□□ -1.58
PTPN20-216ENST00000506080 NPSP0C0P6 89 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms