RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 SS18Q15532 418 aa13.47□□□□□ -0.25
SDHA-206ENST00000505555 HTN3P15516 51 aa13.46□□□□□ -0.25
SDHA-206ENST00000505555 LINC00269Q8N2A0 174 aa13.46□□□□□ -0.25
SDHA-206ENST00000505555 SHISA2Q6UWI4 295 aa13.45□□□□□ -0.26
SDHA-206ENST00000505555 UBE2WQ96B02 151 aa13.45□□□□□ -0.26
SDHA-206ENST00000505555 C6orf226Q5I0X4 101 aa13.45□□□□□ -0.26
SDHA-206ENST00000505555 MIFP14174 115 aa13.44□□□□□ -0.26
SDHA-206ENST00000505555 PPDPFQ9H3Y8 114 aa13.44□□□□□ -0.26
SDHA-206ENST00000505555 ATP5G1P05496 136 aa13.43□□□□□ -0.26
SDHA-206ENST00000505555 SND1-IT1Q9HBX3 110 aa13.43□□□□□ -0.26
SDHA-206ENST00000505555 IGLV10-54A0A075B6I4 117 aa13.42□□□□□ -0.26
SDHA-206ENST00000505555 IGKV2-28A0A075B6P5 120 aa13.42□□□□□ -0.26
SDHA-206ENST00000505555 COX7A2LO14548 114 aa13.42□□□□□ -0.26
SDHA-206ENST00000505555 IGKV2D-28P01615 120 aa13.42□□□□□ -0.26
SDHA-206ENST00000505555 CCL18P55774 89 aa13.42□□□□□ -0.26
SDHA-206ENST00000505555 LINC00337Q8N6G1 96 aa13.42□□□□□ -0.26
SDHA-206ENST00000505555 IBA57-AS1B1ANH7 110 aa13.41□□□□□ -0.26
SDHA-206ENST00000505555 FLNBO75369 2602 aaKnown RBP13.41□□□□□ -0.26
SDHA-206ENST00000505555 ANGP03950 147 aaKnown RBP13.41□□□□□ -0.26
SDHA-206ENST00000505555 SPART-AS1P0CW21 52 aa13.41□□□□□ -0.26
SDHA-206ENST00000505555 DEFB121Q5J5C9 76 aa13.41□□□□□ -0.26
SDHA-206ENST00000505555 TRAV8-4A0A0B4J246 113 aa13.4□□□□□ -0.26
SDHA-206ENST00000505555 OXLD1Q5BKU9 147 aa13.4□□□□□ -0.26
SDHA-206ENST00000505555 TRAV13-2A0A0B4J235 113 aa13.38□□□□□ -0.27
SDHA-206ENST00000505555 WIPF1O43516 503 aa13.38□□□□□ -0.27
SDHA-206ENST00000505555 CRPP02741 224 aa13.38□□□□□ -0.27
SDHA-206ENST00000505555 REG3AQ06141 175 aa13.37□□□□□ -0.27
SDHA-206ENST00000505555 CHCHD10Q8WYQ3 142 aaPredicted RBP13.37□□□□□ -0.27
SDHA-206ENST00000505555 FAM218AQ96MZ4 157 aa13.37□□□□□ -0.27
SDHA-206ENST00000505555 Q8IZM0 81 aa13.36□□□□□ -0.27
SDHA-206ENST00000505555 CD164L2Q6UWJ8 174 aa13.36□□□□□ -0.27
SDHA-206ENST00000505555 F8P00451 2351 aa13.36□□□□□ -0.27
SDHA-206ENST00000505555 MRPL23Q16540 153 aaKnown RBP13.35□□□□□ -0.27
SDHA-206ENST00000505555 KRTAP10-11P60412 298 aa13.35□□□□□ -0.27
SDHA-206ENST00000505555 FBN1P35555 2871 aaKnown RBP13.34□□□□□ -0.27
SDHA-206ENST00000505555 RETNQ9HD89 108 aa13.34□□□□□ -0.27
SDHA-206ENST00000505555 PKD1L1Q8TDX9 2849 aa13.34□□□□□ -0.27
SDHA-206ENST00000505555 RPL28P46779 137 aaKnown RBP13.33□□□□□ -0.28
SDHA-206ENST00000505555 KIAA0087Q14695 138 aa13.33□□□□□ -0.28
SDHA-206ENST00000505555 SMIM11BQ8TCY0 68 aa13.33□□□□□ -0.28
SDHA-206ENST00000505555 FAM240AA0A1B0GVK7 77 aa13.32□□□□□ -0.28
SDHA-206ENST00000505555 SNCGO76070 127 aa13.32□□□□□ -0.28
SDHA-206ENST00000505555 MALP21145 153 aa13.32□□□□□ -0.28
SDHA-206ENST00000505555 ANK2Q01484 3957 aa13.31□□□□□ -0.28
SDHA-206ENST00000505555 TRACP01848 142 aa13.31□□□□□ -0.28
SDHA-206ENST00000505555 Q6Q795 121 aa13.31□□□□□ -0.28
SDHA-206ENST00000505555 LINC01561Q8N1V8 128 aa13.31□□□□□ -0.28
SDHA-206ENST00000505555 C15orf53Q8NAA6 179 aa13.31□□□□□ -0.28
SDHA-206ENST00000505555 LELP1Q5T871 98 aa13.3□□□□□ -0.28
SDHA-206ENST00000505555 OR13C6PQ8NH95 151 aa13.3□□□□□ -0.28
SDHA-206ENST00000505555 GAGE2BQ13066 116 aa13.29□□□□□ -0.28
SDHA-206ENST00000505555 GAGE2EQ4V326 116 aa13.29□□□□□ -0.28
SDHA-206ENST00000505555 C9orf116Q5BN46 136 aaPredicted RBP13.29□□□□□ -0.28
SDHA-206ENST00000505555 Q9HAA7 133 aa13.29□□□□□ -0.28
SDHA-206ENST00000505555 GAGE2DQ9UEU5 116 aa13.29□□□□□ -0.28
SDHA-206ENST00000505555 CFAP161Q6P656 301 aa13.29□□□□□ -0.28
SDHA-206ENST00000505555 PRR3P79522 188 aaKnown RBP13.28□□□□□ -0.28
SDHA-206ENST00000505555 KRTAP24-1Q3LI83 254 aa13.28□□□□□ -0.28
SDHA-206ENST00000505555 KLK12Q9UKR0 248 aa13.28□□□□□ -0.28
SDHA-206ENST00000505555 BAALC-AS2P0C853 105 aa13.27□□□□□ -0.28
SDHA-206ENST00000505555 CMYA5Q8N3K9 4069 aa13.27□□□□□ -0.29
SDHA-206ENST00000505555 C22orf24Q9Y442 160 aa13.27□□□□□ -0.29
SDHA-206ENST00000505555 A0A087WYN8 130 aa13.26□□□□□ -0.29
SDHA-206ENST00000505555 LYPD5Q6UWN5 251 aa13.26□□□□□ -0.29
SDHA-206ENST00000505555 LINC00526Q96FQ7 95 aa13.26□□□□□ -0.29
SDHA-206ENST00000505555 NHLRC4P0CG21 123 aaPredicted RBP13.25□□□□□ -0.29
SDHA-206ENST00000505555 STAB1Q9NY15 2570 aa13.25□□□□□ -0.29
SDHA-206ENST00000505555 C6orf223Q8N319 242 aa13.25□□□□□ -0.29
SDHA-206ENST00000505555 ANAPC13Q9BS18 74 aa13.25□□□□□ -0.29
SDHA-206ENST00000505555 ENHOQ6UWT2 76 aa13.23□□□□□ -0.29
SDHA-206ENST00000505555 TTC32Q5I0X7 151 aa13.23□□□□□ -0.29
SDHA-206ENST00000505555 C10orf25Q5T742 122 aa13.23□□□□□ -0.29
SDHA-206ENST00000505555 CXCL5P42830 114 aa13.21□□□□□ -0.29
SDHA-206ENST00000505555 NDUFV3P56181 108 aaKnown RBP13.21□□□□□ -0.29
SDHA-206ENST00000505555 UNQ6190/PRO20217Q6UXQ8 127 aa13.21□□□□□ -0.29
SDHA-206ENST00000505555 PRR34Q9NV39 138 aa13.21□□□□□ -0.29
SDHA-206ENST00000505555 Q6ZTC4 211 aa13.21□□□□□ -0.29
SDHA-206ENST00000505555 C3orf56Q8N813 242 aa13.21□□□□□ -0.29
SDHA-206ENST00000505555 ACYP1P07311 99 aa13.2□□□□□ -0.3
SDHA-206ENST00000505555 COX17Q14061 63 aa13.2□□□□□ -0.3
SDHA-206ENST00000505555 KPRPQ5T749 579 aaPredicted RBP13.2□□□□□ -0.3
SDHA-206ENST00000505555 SPAG11BQ08648 103 aa13.19□□□□□ -0.3
SDHA-206ENST00000505555 KLK5Q9Y337 293 aaPredicted RBP13.19□□□□□ -0.3
SDHA-206ENST00000505555 H0YGX0 51 aa13.19□□□□□ -0.3
SDHA-206ENST00000505555 Q8NDZ9 215 aa13.19□□□□□ -0.3
SDHA-206ENST00000505555 TENM3Q9P273 2699 aa13.18□□□□□ -0.3
SDHA-206ENST00000505555 EGFEM1PQ0D2K5 195 aa13.18□□□□□ -0.3
SDHA-206ENST00000505555 WFDC10BQ8IUB3 73 aa13.18□□□□□ -0.3
SDHA-206ENST00000505555 LECT2O14960 151 aa13.17□□□□□ -0.3
SDHA-206ENST00000505555 DNAL4O96015 105 aa13.17□□□□□ -0.3
SDHA-206ENST00000505555 NANOS2P60321 138 aaKnown RBP13.17□□□□□ -0.3
SDHA-206ENST00000505555 CYSRT1A8MQ03 144 aa13.16□□□□□ -0.3
SDHA-206ENST00000505555 TRBV7-7A0A0K0K1E9 115 aa13.16□□□□□ -0.3
SDHA-206ENST00000505555 SLPIP03973 132 aa13.15□□□□□ -0.3
SDHA-206ENST00000505555 NCR3O14931 201 aa13.15□□□□□ -0.31
SDHA-206ENST00000505555 SDIM1Q6ZPB5 146 aa13.15□□□□□ -0.31
SDHA-206ENST00000505555 C9orf129Q5T035 196 aaKnown RBP13.14□□□□□ -0.31
SDHA-206ENST00000505555 MAST4O15021 2626 aa13.13□□□□□ -0.31
SDHA-206ENST00000505555 A0A0J9YWU9 116 aa13.13□□□□□ -0.31
SDHA-206ENST00000505555 NDUFC2O95298 119 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms