RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 PRSS2P07478 247 aa8.93□□□□□ -0.98
LMNA-220ENST00000504687 MALP21145 153 aa8.93□□□□□ -0.98
LMNA-220ENST00000504687 C6orf226Q5I0X4 101 aa8.93□□□□□ -0.98
LMNA-220ENST00000504687 MUC7Q8TAX7 377 aa8.93□□□□□ -0.98
LMNA-220ENST00000504687 APLNQ9ULZ1 77 aa8.93□□□□□ -0.98
LMNA-220ENST00000504687 IGLV10-54A0A075B6I4 117 aa8.92□□□□□ -0.98
LMNA-220ENST00000504687 F8WDY8 70 aa8.92□□□□□ -0.98
LMNA-220ENST00000504687 COX17Q14061 63 aa8.92□□□□□ -0.98
LMNA-220ENST00000504687 TOMM7Q9P0U1 55 aa8.92□□□□□ -0.98
LMNA-220ENST00000504687 A4D1N5 150 aa8.91□□□□□ -0.98
LMNA-220ENST00000504687 CFC1BP0CG36 223 aa8.91□□□□□ -0.98
LMNA-220ENST00000504687 CFC1P0CG37 223 aa8.91□□□□□ -0.98
LMNA-220ENST00000504687 MEIG1Q5JSS6 88 aa8.91□□□□□ -0.98
LMNA-220ENST00000504687 LOC107984156A0A0G2JMH3 177 aa8.9□□□□□ -0.98
LMNA-220ENST00000504687 CFAP161Q6P656 301 aa8.9□□□□□ -0.98
LMNA-220ENST00000504687 ARL17AQ8IVW1 177 aa8.9□□□□□ -0.98
LMNA-220ENST00000504687 LINC00308Q8TCZ7 52 aa8.9□□□□□ -0.98
LMNA-220ENST00000504687 GVQW2A0A096LPI5 108 aaPredicted RBP8.89□□□□□ -0.99
LMNA-220ENST00000504687 CKS1BP61024 79 aa8.89□□□□□ -0.99
LMNA-220ENST00000504687 C1orf43Q9BWL3 253 aa8.89□□□□□ -0.99
LMNA-220ENST00000504687 K7ERJ3 54 aa8.88□□□□□ -0.99
LMNA-220ENST00000504687 RMI2Q96E14 147 aa8.88□□□□□ -0.99
LMNA-220ENST00000504687 PRO1854Q9UHT4 67 aa8.88□□□□□ -0.99
LMNA-220ENST00000504687 ERG28Q9UKR5 140 aa8.88□□□□□ -0.99
LMNA-220ENST00000504687 A0A1W2PPM0 123 aa8.87□□□□□ -0.99
LMNA-220ENST00000504687 SPAG11BQ08648 103 aa8.87□□□□□ -0.99
LMNA-220ENST00000504687 NTN5Q8WTR8 489 aaPredicted RBP8.87□□□□□ -0.99
LMNA-220ENST00000504687 RAB37Q96AX2 223 aa8.87□□□□□ -0.99
LMNA-220ENST00000504687 C2orf48Q96LS8 159 aa8.87□□□□□ -0.99
LMNA-220ENST00000504687 COL7A1Q02388 2944 aa8.87□□□□□ -0.99
LMNA-220ENST00000504687 H3BUT2 72 aa8.86□□□□□ -0.99
LMNA-220ENST00000504687 DYNC2H1Q8NCM8 4307 aaKnown RBP8.86□□□□□ -0.99
LMNA-220ENST00000504687 EIF4EBP3O60516 100 aaPredicted RBP8.85□□□□□ -0.99
LMNA-220ENST00000504687 UBE2V1Q13404 147 aa8.85□□□□□ -0.99
LMNA-220ENST00000504687 SOSTDC1Q6X4U4 206 aa8.85□□□□□ -0.99
LMNA-220ENST00000504687 MIR7-3HGQ8N6C7 128 aa8.85□□□□□ -0.99
LMNA-220ENST00000504687 STAB2Q8WWQ8 2551 aa8.84□□□□□ -0.99
LMNA-220ENST00000504687 FABP2P12104 132 aa8.84□□□□□ -0.99
LMNA-220ENST00000504687 LINC00158P58513 81 aa8.84□□□□□ -0.99
LMNA-220ENST00000504687 C2orf82Q6UX34 121 aa8.84□□□□□ -0.99
LMNA-220ENST00000504687 DAND5Q8N907 189 aa8.84□□□□□ -0.99
LMNA-220ENST00000504687 C15orf56Q8N910 161 aa8.84□□□□□ -0.99
LMNA-220ENST00000504687 PGPEP1Q9NXJ5 209 aa8.84□□□□□ -0.99
LMNA-220ENST00000504687 TGP01266 2768 aa8.83□□□□□ -1
LMNA-220ENST00000504687 IGKV2D-24A0A075B6R9 120 aa8.83□□□□□ -1
LMNA-220ENST00000504687 TRBV30A0A0K0K1B3 111 aa8.83□□□□□ -1
LMNA-220ENST00000504687 TSPAN13O95857 204 aa8.83□□□□□ -1
LMNA-220ENST00000504687 VAMP3Q15836 100 aa8.83□□□□□ -1
LMNA-220ENST00000504687 LYRM7Q5U5X0 104 aa8.83□□□□□ -1
LMNA-220ENST00000504687 GTF2H5Q6ZYL4 71 aa8.83□□□□□ -1
LMNA-220ENST00000504687 K7EP34 96 aa8.82□□□□□ -1
LMNA-220ENST00000504687 ZNF561-AS1K7EIQ3 104 aa8.81□□□□□ -1
LMNA-220ENST00000504687 NDUFC2O95298 119 aa8.81□□□□□ -1
LMNA-220ENST00000504687 A0A0U1RRA0 63 aa8.8□□□□□ -1
LMNA-220ENST00000504687 GAGE10A6NGK3 116 aa8.8□□□□□ -1
LMNA-220ENST00000504687 PFN2P35080 140 aa8.8□□□□□ -1
LMNA-220ENST00000504687 UNQ6190/PRO20217Q6UXQ8 127 aa8.8□□□□□ -1
LMNA-220ENST00000504687 UBE2DNLQ8IWF7 75 aa8.8□□□□□ -1
LMNA-220ENST00000504687 NPC2P61916 151 aa8.79□□□□□ -1
LMNA-220ENST00000504687 RNF151Q2KHN1 245 aa8.79□□□□□ -1
LMNA-220ENST00000504687 TTC32Q5I0X7 151 aa8.79□□□□□ -1
LMNA-220ENST00000504687 C10orf25Q5T742 122 aa8.79□□□□□ -1
LMNA-220ENST00000504687 C6orf223Q8N319 242 aa8.79□□□□□ -1
LMNA-220ENST00000504687 SND1-IT1Q9HBX3 110 aa8.79□□□□□ -1
LMNA-220ENST00000504687 SPCS1Q9Y6A9 102 aa8.79□□□□□ -1
LMNA-220ENST00000504687 TRBV20-1A0A075B6N2 111 aa8.78□□□□□ -1
LMNA-220ENST00000504687 TRAV13-2A0A0B4J235 113 aa8.78□□□□□ -1
LMNA-220ENST00000504687 Q9HAA7 133 aa8.78□□□□□ -1
LMNA-220ENST00000504687 C6orf48Q9UBA6 75 aa8.78□□□□□ -1
LMNA-220ENST00000504687 CAMK2N2Q96S95 79 aa8.77□□□□□ -1.01
LMNA-220ENST00000504687 NAA38Q9BRA0 125 aaKnown RBP8.77□□□□□ -1.01
LMNA-220ENST00000504687 IGKV2-28A0A075B6P5 120 aa8.76□□□□□ -1.01
LMNA-220ENST00000504687 IGKV2D-28P01615 120 aa8.76□□□□□ -1.01
LMNA-220ENST00000504687 TLX1NBP0CAT3 122 aa8.75□□□□□ -1.01
LMNA-220ENST00000504687 RPL13AP40429 203 aaKnown RBP8.75□□□□□ -1.01
LMNA-220ENST00000504687 KRTAP1-5Q9BYS1 174 aa8.75□□□□□ -1.01
LMNA-220ENST00000504687 SYCNQ0VAF6 134 aa8.74□□□□□ -1.01
LMNA-220ENST00000504687 HIGD2BQ4VC39 106 aa8.74□□□□□ -1.01
LMNA-220ENST00000504687 C9orf116Q5BN46 136 aaPredicted RBP8.74□□□□□ -1.01
LMNA-220ENST00000504687 Q6ZRU5 148 aa8.74□□□□□ -1.01
LMNA-220ENST00000504687 DNAH1Q9P2D7 4330 aa8.74□□□□□ -1.01
LMNA-220ENST00000504687 NBDYA0A0U1RRE5 68 aa8.73□□□□□ -1.01
LMNA-220ENST00000504687 USP17L23D6RBM5 183 aa8.73□□□□□ -1.01
LMNA-220ENST00000504687 NDUFC2-KCTD14E9PQ53 114 aa8.73□□□□□ -1.01
LMNA-220ENST00000504687 COX6CP09669 75 aa8.73□□□□□ -1.01
LMNA-220ENST00000504687 LINC00526Q96FQ7 95 aa8.73□□□□□ -1.01
LMNA-220ENST00000504687 DNAH7Q8WXX0 4024 aa8.72□□□□□ -1.01
LMNA-220ENST00000504687 TRBV10-2A0A0K0K1G8 114 aa8.72□□□□□ -1.01
LMNA-220ENST00000504687 RPL28P46779 137 aaKnown RBP8.72□□□□□ -1.01
LMNA-220ENST00000504687 LINC00337Q8N6G1 96 aa8.72□□□□□ -1.01
LMNA-220ENST00000504687 TRIAP1O43715 76 aa8.71□□□□□ -1.02
LMNA-220ENST00000504687 PSMB2P49721 201 aa8.71□□□□□ -1.02
LMNA-220ENST00000504687 Q1RN00 199 aa8.71□□□□□ -1.02
LMNA-220ENST00000504687 WWC2-AS2Q96NR7 200 aa8.71□□□□□ -1.02
LMNA-220ENST00000504687 C14orf177Q52M58 125 aa8.7□□□□□ -1.02
LMNA-220ENST00000504687 CARD19Q96LW7 228 aa8.7□□□□□ -1.02
LMNA-220ENST00000504687 F8W1H4 67 aa8.69□□□□□ -1.02
LMNA-220ENST00000504687 TCL1BO95988 128 aa8.69□□□□□ -1.02
LMNA-220ENST00000504687 SCGB1C2P0DMR2 95 aa8.69□□□□□ -1.02
LMNA-220ENST00000504687 CASC10Q5T4H9 136 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms