RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 VAMP8Q9BV40 100 aa8.78□□□□□ -1
PRDM2-213ENST00000503842 KMT2CQ8NEZ4 4911 aaKnown RBP8.77□□□□□ -1
PRDM2-213ENST00000503842 GVQW2A0A096LPI5 108 aaPredicted RBP8.77□□□□□ -1.01
PRDM2-213ENST00000503842 LRCOL1A6NCL2 159 aa8.77□□□□□ -1.01
PRDM2-213ENST00000503842 TSPEAR-AS2P59090 65 aa8.77□□□□□ -1.01
PRDM2-213ENST00000503842 WFDC2Q14508 124 aa8.77□□□□□ -1.01
PRDM2-213ENST00000503842 KIAA0087Q14695 138 aa8.77□□□□□ -1.01
PRDM2-213ENST00000503842 PLEKHB2Q96CS7 222 aa8.77□□□□□ -1.01
PRDM2-213ENST00000503842 SPAG11BQ08648 103 aa8.76□□□□□ -1.01
PRDM2-213ENST00000503842 Q8IZM0 81 aa8.76□□□□□ -1.01
PRDM2-213ENST00000503842 COX7B2Q8TF08 81 aa8.76□□□□□ -1.01
PRDM2-213ENST00000503842 PAM16Q9Y3D7 125 aa8.76□□□□□ -1.01
PRDM2-213ENST00000503842 FRAS1Q86XX4 4008 aa8.76□□□□□ -1.01
PRDM2-213ENST00000503842 J3QQQ9 107 aa8.75□□□□□ -1.01
PRDM2-213ENST00000503842 RTL8CO15255 209 aa8.75□□□□□ -1.01
PRDM2-213ENST00000503842 HIGD2BQ4VC39 106 aa8.75□□□□□ -1.01
PRDM2-213ENST00000503842 SPATA45Q537H7 98 aa8.75□□□□□ -1.01
PRDM2-213ENST00000503842 TOMM7Q9P0U1 55 aa8.75□□□□□ -1.01
PRDM2-213ENST00000503842 C9orf118A6NHY6 69 aa8.74□□□□□ -1.01
PRDM2-213ENST00000503842 LECT2O14960 151 aa8.74□□□□□ -1.01
PRDM2-213ENST00000503842 PRSS2P07478 247 aa8.73□□□□□ -1.01
PRDM2-213ENST00000503842 NMUP48645 174 aa8.73□□□□□ -1.01
PRDM2-213ENST00000503842 S100A12P80511 92 aa8.73□□□□□ -1.01
PRDM2-213ENST00000503842 LINC00518Q8N0U6 118 aa8.73□□□□□ -1.01
PRDM2-213ENST00000503842 NTN5Q8WTR8 489 aaPredicted RBP8.73□□□□□ -1.01
PRDM2-213ENST00000503842 LINC00526Q96FQ7 95 aa8.73□□□□□ -1.01
PRDM2-213ENST00000503842 A0A087WTM6 91 aa8.72□□□□□ -1.01
PRDM2-213ENST00000503842 LGALS3P17931 250 aaKnown RBP8.72□□□□□ -1.01
PRDM2-213ENST00000503842 C14orf177Q52M58 125 aa8.72□□□□□ -1.01
PRDM2-213ENST00000503842 C6orf226Q5I0X4 101 aa8.72□□□□□ -1.01
PRDM2-213ENST00000503842 PCP2Q8IVA1 136 aa8.72□□□□□ -1.01
PRDM2-213ENST00000503842 ZNF625Q96I27 306 aaPredicted RBP8.72□□□□□ -1.01
PRDM2-213ENST00000503842 C2orf48Q96LS8 159 aa8.72□□□□□ -1.01
PRDM2-213ENST00000503842 C12orf57Q99622 126 aa8.72□□□□□ -1.01
PRDM2-213ENST00000503842 TTTY13Q9BZ97 58 aa8.72□□□□□ -1.01
PRDM2-213ENST00000503842 F8WDY8 70 aa8.71□□□□□ -1.02
PRDM2-213ENST00000503842 NDUFA1O15239 70 aa8.71□□□□□ -1.02
PRDM2-213ENST00000503842 CXCL5P42830 114 aa8.71□□□□□ -1.02
PRDM2-213ENST00000503842 NDUFA12Q9UI09 145 aa8.71□□□□□ -1.02
PRDM2-213ENST00000503842 COX8AP10176 69 aa8.7□□□□□ -1.02
PRDM2-213ENST00000503842 C2orf82Q6UX34 121 aa8.7□□□□□ -1.02
PRDM2-213ENST00000503842 MYMXA0A1B0GTQ4 84 aa8.69□□□□□ -1.02
PRDM2-213ENST00000503842 ZNF815PA8K554 130 aa8.69□□□□□ -1.02
PRDM2-213ENST00000503842 SLPIP03973 132 aa8.69□□□□□ -1.02
PRDM2-213ENST00000503842 CKS1BP61024 79 aa8.69□□□□□ -1.02
PRDM2-213ENST00000503842 C10orf25Q5T742 122 aa8.69□□□□□ -1.02
PRDM2-213ENST00000503842 SFTA2Q6UW10 78 aa8.69□□□□□ -1.02
PRDM2-213ENST00000503842 FAT2Q9NYQ8 4349 aa8.69□□□□□ -1.02
PRDM2-213ENST00000503842 DLEU1O43261 78 aa8.68□□□□□ -1.02
PRDM2-213ENST00000503842 UNQ6190/PRO20217Q6UXQ8 127 aa8.68□□□□□ -1.02
PRDM2-213ENST00000503842 BOD1L2Q8IYS8 172 aa8.68□□□□□ -1.02
PRDM2-213ENST00000503842 Q8N814 137 aa8.68□□□□□ -1.02
PRDM2-213ENST00000503842 C14orf144Q96I85 54 aa8.68□□□□□ -1.02
PRDM2-213ENST00000503842 CAMK2N2Q96S95 79 aa8.68□□□□□ -1.02
PRDM2-213ENST00000503842 DNAH11Q96DT5 4516 aa8.68□□□□□ -1.02
PRDM2-213ENST00000503842 CNBPP62633 177 aaKnown RBP8.67□□□□□ -1.02
PRDM2-213ENST00000503842 HERV-K104P63124 156 aa8.67□□□□□ -1.02
PRDM2-213ENST00000503842 SYCNQ0VAF6 134 aa8.67□□□□□ -1.02
PRDM2-213ENST00000503842 Q6ZRU5 148 aa8.67□□□□□ -1.02
PRDM2-213ENST00000503842 TP73-AS1Q9UF72 201 aa8.67□□□□□ -1.02
PRDM2-213ENST00000503842 CARD19Q96LW7 228 aa8.66□□□□□ -1.02
PRDM2-213ENST00000503842 C6orf48Q9UBA6 75 aa8.66□□□□□ -1.02
PRDM2-213ENST00000503842 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.65□□□□□ -1.02
PRDM2-213ENST00000503842 A0A0J9YXY3 114 aa8.65□□□□□ -1.02
PRDM2-213ENST00000503842 TRBV30A0A0K0K1B3 111 aa8.65□□□□□ -1.02
PRDM2-213ENST00000503842 RNF151Q2KHN1 245 aa8.65□□□□□ -1.02
PRDM2-213ENST00000503842 SLC25A34Q6PIV7 304 aa8.65□□□□□ -1.02
PRDM2-213ENST00000503842 LINC00336Q6ZUF6 198 aa8.65□□□□□ -1.02
PRDM2-213ENST00000503842 PRO1933Q9H354 126 aa8.64□□□□□ -1.03
PRDM2-213ENST00000503842 RYR3Q15413 4870 aa8.63□□□□□ -1.03
PRDM2-213ENST00000503842 HECTD4Q9Y4D8 3996 aa8.63□□□□□ -1.03
PRDM2-213ENST00000503842 C9orf116Q5BN46 136 aaPredicted RBP8.63□□□□□ -1.03
PRDM2-213ENST00000503842 UQCR10Q9UDW1 63 aa8.63□□□□□ -1.03
PRDM2-213ENST00000503842 ERG28Q9UKR5 140 aa8.63□□□□□ -1.03
PRDM2-213ENST00000503842 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.62□□□□□ -1.03
PRDM2-213ENST00000503842 TIMM17BO60830 172 aa8.62□□□□□ -1.03
PRDM2-213ENST00000503842 LITAFQ99732 161 aa8.62□□□□□ -1.03
PRDM2-213ENST00000503842 LINC00587B1AMM8 73 aa8.61□□□□□ -1.03
PRDM2-213ENST00000503842 MEIG1Q5JSS6 88 aa8.61□□□□□ -1.03
PRDM2-213ENST00000503842 SCGB1D4Q6XE38 83 aa8.61□□□□□ -1.03
PRDM2-213ENST00000503842 C2orf91Q6ZV80 131 aa8.61□□□□□ -1.03
PRDM2-213ENST00000503842 C9orf163Q8N9P6 203 aa8.61□□□□□ -1.03
PRDM2-213ENST00000503842 DNAH5Q8TE73 4624 aa8.6□□□□□ -1.03
PRDM2-213ENST00000503842 TLX1NBP0CAT3 122 aa8.6□□□□□ -1.03
PRDM2-213ENST00000503842 SMIM13P0DJ93 91 aa8.6□□□□□ -1.03
PRDM2-213ENST00000503842 COX17Q14061 63 aa8.6□□□□□ -1.03
PRDM2-213ENST00000503842 MIEN1Q9BRT3 115 aa8.6□□□□□ -1.03
PRDM2-213ENST00000503842 HIGD1BQ9P298 99 aa8.6□□□□□ -1.03
PRDM2-213ENST00000503842 TSTD3H0UI37 97 aa8.59□□□□□ -1.03
PRDM2-213ENST00000503842 PFN2P35080 140 aa8.59□□□□□ -1.03
PRDM2-213ENST00000503842 KRTAP10-2P60368 255 aa8.59□□□□□ -1.03
PRDM2-213ENST00000503842 A0A0U1RRA0 63 aa8.58□□□□□ -1.04
PRDM2-213ENST00000503842 NDUFC2-KCTD14E9PQ53 114 aa8.58□□□□□ -1.04
PRDM2-213ENST00000503842 FUSP35637 526 aaKnown RBP eCLIP8.58□□□□□ -1.04
PRDM2-213ENST00000503842 LINC00158P58513 81 aa8.58□□□□□ -1.04
PRDM2-213ENST00000503842 CIRBPQ14011 172 aaKnown RBP8.58□□□□□ -1.04
PRDM2-213ENST00000503842 ADAMTSL4-AS1Q5T5F5 129 aa8.58□□□□□ -1.04
PRDM2-213ENST00000503842 IGLV5-52A0A0A0MRZ9 124 aa8.57□□□□□ -1.04
PRDM2-213ENST00000503842 A0A1B0GVY2 172 aa8.57□□□□□ -1.04
PRDM2-213ENST00000503842 TMEM238C9JI98 176 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms