RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 SPANXDQ9BXN6 97 aa5.44□□□□□ -1.54
TOPBP1-202ENST00000503338 Q9HAA7 133 aa5.44□□□□□ -1.54
TOPBP1-202ENST00000503338 SPANXCQ9NY87 97 aa5.44□□□□□ -1.54
TOPBP1-202ENST00000503338 NBDYA0A0U1RRE5 68 aa5.43□□□□□ -1.54
TOPBP1-202ENST00000503338 A6NDN8 102 aa5.43□□□□□ -1.54
TOPBP1-202ENST00000503338 ZNF561-AS1K7EIQ3 104 aa5.43□□□□□ -1.54
TOPBP1-202ENST00000503338 COX17Q14061 63 aa5.43□□□□□ -1.54
TOPBP1-202ENST00000503338 KIAA0087Q14695 138 aa5.43□□□□□ -1.54
TOPBP1-202ENST00000503338 BVES-AS1Q5T3Y7 98 aa5.43□□□□□ -1.54
TOPBP1-202ENST00000503338 CEND1Q8N111 149 aa5.43□□□□□ -1.54
TOPBP1-202ENST00000503338 C2orf48Q96LS8 159 aa5.43□□□□□ -1.54
TOPBP1-202ENST00000503338 PPDPFQ9H3Y8 114 aa5.43□□□□□ -1.54
TOPBP1-202ENST00000503338 MEGF8Q7Z7M0 2845 aa5.43□□□□□ -1.54
TOPBP1-202ENST00000503338 HINT1P49773 126 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-202ENST00000503338 PTTG1IPP53801 180 aa5.42□□□□□ -1.54
TOPBP1-202ENST00000503338 RPL24P83731 157 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-202ENST00000503338 COL5A1-AS1Q5SY13 56 aa5.42□□□□□ -1.54
TOPBP1-202ENST00000503338 SNHG12Q9BXW3 62 aa5.42□□□□□ -1.54
TOPBP1-202ENST00000503338 PRKDCP78527 4128 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-202ENST00000503338 GVQW2A0A096LPI5 108 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-202ENST00000503338 TRBV30A0A0K0K1B3 111 aa5.41□□□□□ -1.54
TOPBP1-202ENST00000503338 BATFQ16520 125 aa5.41□□□□□ -1.54
TOPBP1-202ENST00000503338 C14orf177Q52M58 125 aa5.41□□□□□ -1.54
TOPBP1-202ENST00000503338 CASC10Q5T4H9 136 aa5.41□□□□□ -1.54
TOPBP1-202ENST00000503338 NTN5Q8WTR8 489 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-202ENST00000503338 LITAFQ99732 161 aa5.41□□□□□ -1.54
TOPBP1-202ENST00000503338 COL7A1Q02388 2944 aa5.41□□□□□ -1.54
TOPBP1-202ENST00000503338 FBN3Q75N90 2809 aa5.4□□□□□ -1.54
TOPBP1-202ENST00000503338 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.4□□□□□ -1.54
TOPBP1-202ENST00000503338 PSCAO43653 123 aa5.4□□□□□ -1.54
TOPBP1-202ENST00000503338 CAMK2N2Q96S95 79 aa5.4□□□□□ -1.54
TOPBP1-202ENST00000503338 ERG28Q9UKR5 140 aa5.4□□□□□ -1.54
TOPBP1-202ENST00000503338 LINC00158P58513 81 aa5.39□□□□□ -1.55
TOPBP1-202ENST00000503338 C15orf56Q8N910 161 aa5.39□□□□□ -1.55
TOPBP1-202ENST00000503338 USP17L23D6RBM5 183 aa5.38□□□□□ -1.55
TOPBP1-202ENST00000503338 EREGO14944 169 aa5.38□□□□□ -1.55
TOPBP1-202ENST00000503338 SMIM13P0DJ93 91 aa5.38□□□□□ -1.55
TOPBP1-202ENST00000503338 FXYD2P54710 66 aa5.38□□□□□ -1.55
TOPBP1-202ENST00000503338 RNF151Q2KHN1 245 aa5.38□□□□□ -1.55
TOPBP1-202ENST00000503338 C2orf82Q6UX34 121 aa5.38□□□□□ -1.55
TOPBP1-202ENST00000503338 MUSTN1Q8IVN3 82 aa5.38□□□□□ -1.55
TOPBP1-202ENST00000503338 LINC00308Q8TCZ7 52 aa5.38□□□□□ -1.55
TOPBP1-202ENST00000503338 KRTAP1-5Q9BYS1 174 aa5.38□□□□□ -1.55
TOPBP1-202ENST00000503338 A0A1B0GWB2 263 aa5.37□□□□□ -1.55
TOPBP1-202ENST00000503338 LY6G6CO95867 125 aa5.37□□□□□ -1.55
TOPBP1-202ENST00000503338 PFN2P35080 140 aa5.37□□□□□ -1.55
TOPBP1-202ENST00000503338 SYCNQ0VAF6 134 aa5.37□□□□□ -1.55
TOPBP1-202ENST00000503338 HIGD2BQ4VC39 106 aa5.37□□□□□ -1.55
TOPBP1-202ENST00000503338 ADAMTSL4-AS1Q5T5F5 129 aa5.37□□□□□ -1.55
TOPBP1-202ENST00000503338 UNQ6190/PRO20217Q6UXQ8 127 aa5.37□□□□□ -1.55
TOPBP1-202ENST00000503338 MIR7-3HGQ8N6C7 128 aa5.37□□□□□ -1.55
TOPBP1-202ENST00000503338 LINC00476Q8WZB0 136 aa5.37□□□□□ -1.55
TOPBP1-202ENST00000503338 PKIGQ9Y2B9 76 aa5.37□□□□□ -1.55
TOPBP1-202ENST00000503338 A0A0B4J2C4 111 aa5.36□□□□□ -1.55
TOPBP1-202ENST00000503338 LOC107984156A0A0G2JMH3 177 aa5.36□□□□□ -1.55
TOPBP1-202ENST00000503338 A0A0U1RRA0 63 aa5.36□□□□□ -1.55
TOPBP1-202ENST00000503338 Q6ZR54 194 aa5.36□□□□□ -1.55
TOPBP1-202ENST00000503338 ARL17AQ8IVW1 177 aa5.36□□□□□ -1.55
TOPBP1-202ENST00000503338 C6orf223Q8N319 242 aa5.36□□□□□ -1.55
TOPBP1-202ENST00000503338 CARD19Q96LW7 228 aa5.36□□□□□ -1.55
TOPBP1-202ENST00000503338 NHP2Q9NX24 153 aaKnown RBP5.36□□□□□ -1.55
TOPBP1-202ENST00000503338 A4D1N5 150 aa5.35□□□□□ -1.55
TOPBP1-202ENST00000503338 Q6ZRU5 148 aa5.35□□□□□ -1.55
TOPBP1-202ENST00000503338 RAB37Q96AX2 223 aa5.35□□□□□ -1.55
TOPBP1-202ENST00000503338 C6orf48Q9UBA6 75 aa5.35□□□□□ -1.55
TOPBP1-202ENST00000503338 NDUFC2-KCTD14E9PQ53 114 aa5.34□□□□□ -1.55
TOPBP1-202ENST00000503338 NDUFC2O95298 119 aa5.34□□□□□ -1.55
TOPBP1-202ENST00000503338 TLX1NBP0CAT3 122 aa5.34□□□□□ -1.55
TOPBP1-202ENST00000503338 C10orf25Q5T742 122 aa5.34□□□□□ -1.55
TOPBP1-202ENST00000503338 C1orf134Q5TEV5 83 aa5.34□□□□□ -1.55
TOPBP1-202ENST00000503338 Q6ZRN7 208 aaPredicted RBP5.34□□□□□ -1.55
TOPBP1-202ENST00000503338 DAND5Q8N907 189 aa5.34□□□□□ -1.55
TOPBP1-202ENST00000503338 LINC00526Q96FQ7 95 aa5.34□□□□□ -1.55
TOPBP1-202ENST00000503338 TRAV13-2A0A0B4J235 113 aa5.33□□□□□ -1.56
TOPBP1-202ENST00000503338 M0R2N4 97 aa5.33□□□□□ -1.56
TOPBP1-202ENST00000503338 CFC1BP0CG36 223 aa5.33□□□□□ -1.56
TOPBP1-202ENST00000503338 CFC1P0CG37 223 aa5.33□□□□□ -1.56
TOPBP1-202ENST00000503338 NPC2P61916 151 aa5.33□□□□□ -1.56
TOPBP1-202ENST00000503338 CNBPP62633 177 aaKnown RBP5.33□□□□□ -1.56
TOPBP1-202ENST00000503338 TNP2Q05952 138 aa5.33□□□□□ -1.56
TOPBP1-202ENST00000503338 SND1-IT1Q9HBX3 110 aa5.33□□□□□ -1.56
TOPBP1-202ENST00000503338 PRO1854Q9UHT4 67 aa5.33□□□□□ -1.56
TOPBP1-202ENST00000503338 DNAH7Q8WXX0 4024 aa5.32□□□□□ -1.56
TOPBP1-202ENST00000503338 C9orf118A6NHY6 69 aa5.32□□□□□ -1.56
TOPBP1-202ENST00000503338 TAX1BP3O14907 124 aa5.32□□□□□ -1.56
TOPBP1-202ENST00000503338 C9orf116Q5BN46 136 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-202ENST00000503338 LYRM7Q5U5X0 104 aa5.32□□□□□ -1.56
TOPBP1-202ENST00000503338 SOSTDC1Q6X4U4 206 aa5.32□□□□□ -1.56
TOPBP1-202ENST00000503338 DYNC2H1Q8NCM8 4307 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-202ENST00000503338 LOC107984640A0A0U1RRK4 108 aa5.31□□□□□ -1.56
TOPBP1-202ENST00000503338 LRCOL1A6NCL2 159 aa5.31□□□□□ -1.56
TOPBP1-202ENST00000503338 LECT2O14960 151 aa5.31□□□□□ -1.56
TOPBP1-202ENST00000503338 CSMD3Q7Z407 3707 aa5.3□□□□□ -1.56
TOPBP1-202ENST00000503338 K7ERJ3 54 aa5.3□□□□□ -1.56
TOPBP1-202ENST00000503338 Q8N814 137 aa5.3□□□□□ -1.56
TOPBP1-202ENST00000503338 CBY1Q9Y3M2 126 aa5.3□□□□□ -1.56
TOPBP1-202ENST00000503338 A0A087WTM6 91 aa5.29□□□□□ -1.56
TOPBP1-202ENST00000503338 TRBV10-2A0A0K0K1G8 114 aa5.29□□□□□ -1.56
TOPBP1-202ENST00000503338 EIF4EBP3O60516 100 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-202ENST00000503338 SLPIP03973 132 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms