RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 GAGE12HA6NDE8 117 aa14.89□□□□□ -0.03
PTPN13-205ENST00000502971 LINC01556Q5JQF7 62 aa14.89□□□□□ -0.03
PTPN13-205ENST00000502971 PGPEP1Q9NXJ5 209 aa14.89□□□□□ -0.03
PTPN13-205ENST00000502971 PRO1854Q9UHT4 67 aa14.89□□□□□ -0.03
PTPN13-205ENST00000502971 GTF2H5Q6ZYL4 71 aa14.89□□□□□ -0.03
PTPN13-205ENST00000502971 UBE2WQ96B02 151 aa14.89□□□□□ -0.03
PTPN13-205ENST00000502971 PPDPFQ9H3Y8 114 aa14.89□□□□□ -0.03
PTPN13-205ENST00000502971 GAGE10A6NGK3 116 aa14.88□□□□□ -0.03
PTPN13-205ENST00000502971 DAND5Q8N907 189 aa14.88□□□□□ -0.03
PTPN13-205ENST00000502971 LINC00308Q8TCZ7 52 aa14.88□□□□□ -0.03
PTPN13-205ENST00000502971 PRKDCP78527 4128 aaKnown RBP14.88□□□□□ -0.03
PTPN13-205ENST00000502971 DNAH9Q9NYC9 4486 aa14.87□□□□□ -0.03
PTPN13-205ENST00000502971 IBA57-AS1B1ANH7 110 aa14.86□□□□□ -0.03
PTPN13-205ENST00000502971 K7EP34 96 aa14.86□□□□□ -0.03
PTPN13-205ENST00000502971 NPC2P61916 151 aa14.86□□□□□ -0.03
PTPN13-205ENST00000502971 A0A0U1RRA0 63 aa14.86□□□□□ -0.03
PTPN13-205ENST00000502971 TSPAN13O95857 204 aa14.86□□□□□ -0.03
PTPN13-205ENST00000502971 CXCL5P42830 114 aa14.86□□□□□ -0.03
PTPN13-205ENST00000502971 SPCS1Q9Y6A9 102 aa14.86□□□□□ -0.03
PTPN13-205ENST00000502971 EIF4EBP3O60516 100 aaPredicted RBP14.85□□□□□ -0.03
PTPN13-205ENST00000502971 KIAA0087Q14695 138 aa14.85□□□□□ -0.03
PTPN13-205ENST00000502971 KLK5Q9Y337 293 aaPredicted RBP14.85□□□□□ -0.03
PTPN13-205ENST00000502971 CFAP161Q6P656 301 aa14.84□□□□□ -0.03
PTPN13-205ENST00000502971 DNAH10OSP0CZ25 163 aa14.83□□□□□ -0.03
PTPN13-205ENST00000502971 COL7A1Q02388 2944 aa14.83□□□□□ -0.04
PTPN13-205ENST00000502971 CCL18P55774 89 aa14.83□□□□□ -0.04
PTPN13-205ENST00000502971 CKS1BP61024 79 aa14.83□□□□□ -0.04
PTPN13-205ENST00000502971 LINC00588Q9Y4M8 146 aa14.82□□□□□ -0.04
PTPN13-205ENST00000502971 LINC00158P58513 81 aa14.81□□□□□ -0.04
PTPN13-205ENST00000502971 ERG28Q9UKR5 140 aa14.81□□□□□ -0.04
PTPN13-205ENST00000502971 SOSTDC1Q6X4U4 206 aa14.8□□□□□ -0.04
PTPN13-205ENST00000502971 MIR7-3HGQ8N6C7 128 aa14.8□□□□□ -0.04
PTPN13-205ENST00000502971 STAB2Q8WWQ8 2551 aa14.79□□□□□ -0.04
PTPN13-205ENST00000502971 C2orf82Q6UX34 121 aa14.78□□□□□ -0.04
PTPN13-205ENST00000502971 SPAG11BQ08648 103 aa14.78□□□□□ -0.04
PTPN13-205ENST00000502971 LYRM7Q5U5X0 104 aa14.78□□□□□ -0.04
PTPN13-205ENST00000502971 KRTAP26-1Q6PEX3 210 aa14.78□□□□□ -0.04
PTPN13-205ENST00000502971 UPK3BQ9BT76 320 aa14.77□□□□□ -0.05
PTPN13-205ENST00000502971 PFN2P35080 140 aa14.76□□□□□ -0.05
PTPN13-205ENST00000502971 COX17Q14061 63 aa14.75□□□□□ -0.05
PTPN13-205ENST00000502971 C1orf43Q9BWL3 253 aa14.75□□□□□ -0.05
PTPN13-205ENST00000502971 LOC107984156A0A0G2JMH3 177 aa14.75□□□□□ -0.05
PTPN13-205ENST00000502971 ARL17AQ8IVW1 177 aa14.75□□□□□ -0.05
PTPN13-205ENST00000502971 Q1RN00 199 aa14.73□□□□□ -0.05
PTPN13-205ENST00000502971 H7C2G1 150 aa14.72□□□□□ -0.05
PTPN13-205ENST00000502971 TGP01266 2768 aa14.71□□□□□ -0.05
PTPN13-205ENST00000502971 PSMB2P49721 201 aa14.71□□□□□ -0.05
PTPN13-205ENST00000502971 SND1-IT1Q9HBX3 110 aa14.7□□□□□ -0.06
PTPN13-205ENST00000502971 IGKV2D-24A0A075B6R9 120 aa14.69□□□□□ -0.06
PTPN13-205ENST00000502971 TRBV30A0A0K0K1B3 111 aa14.69□□□□□ -0.06
PTPN13-205ENST00000502971 SCGB1C2P0DMR2 95 aa14.69□□□□□ -0.06
PTPN13-205ENST00000502971 RPL13AP40429 203 aaKnown RBP14.69□□□□□ -0.06
PTPN13-205ENST00000502971 C6orf223Q8N319 242 aa14.69□□□□□ -0.06
PTPN13-205ENST00000502971 NTN5Q8WTR8 489 aaPredicted RBP14.69□□□□□ -0.06
PTPN13-205ENST00000502971 TRBV20-1A0A075B6N2 111 aa14.69□□□□□ -0.06
PTPN13-205ENST00000502971 MUC7Q8TAX7 377 aa14.69□□□□□ -0.06
PTPN13-205ENST00000502971 UNQ6190/PRO20217Q6UXQ8 127 aa14.68□□□□□ -0.06
PTPN13-205ENST00000502971 GVQW2A0A096LPI5 108 aaPredicted RBP14.67□□□□□ -0.06
PTPN13-205ENST00000502971 APLNQ9ULZ1 77 aa14.67□□□□□ -0.06
PTPN13-205ENST00000502971 TRAV13-2A0A0B4J235 113 aa14.66□□□□□ -0.06
PTPN13-205ENST00000502971 H3BMG7 143 aa14.66□□□□□ -0.06
PTPN13-205ENST00000502971 ZNF561-AS1K7EIQ3 104 aa14.66□□□□□ -0.06
PTPN13-205ENST00000502971 C10orf25Q5T742 122 aa14.66□□□□□ -0.06
PTPN13-205ENST00000502971 LINC00526Q96FQ7 95 aa14.65□□□□□ -0.06
PTPN13-205ENST00000502971 Q9HAA7 133 aa14.65□□□□□ -0.06
PTPN13-205ENST00000502971 C15orf56Q8N910 161 aa14.64□□□□□ -0.07
PTPN13-205ENST00000502971 TRIAP1O43715 76 aa14.63□□□□□ -0.07
PTPN13-205ENST00000502971 C9orf116Q5BN46 136 aaPredicted RBP14.63□□□□□ -0.07
PTPN13-205ENST00000502971 RMI2Q96E14 147 aa14.63□□□□□ -0.07
PTPN13-205ENST00000502971 NUPR2A6NF83 97 aa14.63□□□□□ -0.07
PTPN13-205ENST00000502971 F8WDY8 70 aa14.63□□□□□ -0.07
PTPN13-205ENST00000502971 TCL1BO95988 128 aa14.63□□□□□ -0.07
PTPN13-205ENST00000502971 COX6CP09669 75 aa14.63□□□□□ -0.07
PTPN13-205ENST00000502971 C2orf48Q96LS8 159 aa14.63□□□□□ -0.07
PTPN13-205ENST00000502971 IGKV2-28A0A075B6P5 120 aa14.62□□□□□ -0.07
PTPN13-205ENST00000502971 F8W1H4 67 aa14.62□□□□□ -0.07
PTPN13-205ENST00000502971 IGKV2D-28P01615 120 aa14.62□□□□□ -0.07
PTPN13-205ENST00000502971 HIGD2BQ4VC39 106 aa14.61□□□□□ -0.07
PTPN13-205ENST00000502971 CAMK2N2Q96S95 79 aa14.61□□□□□ -0.07
PTPN13-205ENST00000502971 C6orf48Q9UBA6 75 aa14.6□□□□□ -0.07
PTPN13-205ENST00000502971 UBE2DNLQ8IWF7 75 aa14.59□□□□□ -0.07
PTPN13-205ENST00000502971 NDUFC2O95298 119 aa14.58□□□□□ -0.07
PTPN13-205ENST00000502971 LINC00337Q8N6G1 96 aa14.58□□□□□ -0.07
PTPN13-205ENST00000502971 ATXN8Q156A1 80 aa14.56□□□□□ -0.08
PTPN13-205ENST00000502971 PRO0461Q9UI25 63 aa14.56□□□□□ -0.08
PTPN13-205ENST00000502971 WWC2-AS2Q96NR7 200 aa14.54□□□□□ -0.08
PTPN13-205ENST00000502971 Q6ZRU5 148 aa14.53□□□□□ -0.08
PTPN13-205ENST00000502971 RPL28P46779 137 aaKnown RBP14.52□□□□□ -0.08
PTPN13-205ENST00000502971 DYNC2H1Q8NCM8 4307 aaKnown RBP14.52□□□□□ -0.08
PTPN13-205ENST00000502971 DNAH7Q8WXX0 4024 aa14.51□□□□□ -0.09
PTPN13-205ENST00000502971 WFDC2Q14508 124 aa14.51□□□□□ -0.09
PTPN13-205ENST00000502971 SYCNQ0VAF6 134 aa14.5□□□□□ -0.09
PTPN13-205ENST00000502971 MTURNQ8N3F0 131 aa14.49□□□□□ -0.09
PTPN13-205ENST00000502971 USP17L23D6RBM5 183 aa14.49□□□□□ -0.09
PTPN13-205ENST00000502971 OR13C6PQ8NH95 151 aa14.49□□□□□ -0.09
PTPN13-205ENST00000502971 LST1O00453 97 aa14.48□□□□□ -0.09
PTPN13-205ENST00000502971 LINC01620Q4KN68 170 aa14.47□□□□□ -0.09
PTPN13-205ENST00000502971 CASC10Q5T4H9 136 aa14.47□□□□□ -0.09
PTPN13-205ENST00000502971 SMIM11BQ8TCY0 68 aa14.47□□□□□ -0.09
PTPN13-205ENST00000502971 CLEC2BQ92478 149 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms