RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 A0A096LNI7 61 aa15.98■□□□□ 0.15
LSM6-202ENST00000502781 TOMM7Q9P0U1 55 aa15.98■□□□□ 0.15
LSM6-202ENST00000502781 C6orf48Q9UBA6 75 aa15.98■□□□□ 0.15
LSM6-202ENST00000502781 LOC107984640A0A0U1RRK4 108 aa15.97■□□□□ 0.15
LSM6-202ENST00000502781 SMR3BP02814 79 aaPredicted RBP15.97■□□□□ 0.15
LSM6-202ENST00000502781 PRSS2P07478 247 aa15.97■□□□□ 0.15
LSM6-202ENST00000502781 SPINK8P0C7L1 97 aa15.97■□□□□ 0.15
LSM6-202ENST00000502781 HSPB8Q9UJY1 196 aa15.97■□□□□ 0.15
LSM6-202ENST00000502781 C6orf226Q5I0X4 101 aa15.96■□□□□ 0.15
LSM6-202ENST00000502781 IGLV5-39A0A0G2JS06 123 aa15.95■□□□□ 0.14
LSM6-202ENST00000502781 TRBV30A0A0K0K1B3 111 aa15.95■□□□□ 0.14
LSM6-202ENST00000502781 F8VRH5 84 aa15.95■□□□□ 0.14
LSM6-202ENST00000502781 FABP4P15090 132 aa15.95■□□□□ 0.14
LSM6-202ENST00000502781 IGKV2-24A0A0C4DH68 120 aa15.94■□□□□ 0.14
LSM6-202ENST00000502781 ODF1Q14990 250 aa15.94■□□□□ 0.14
LSM6-202ENST00000502781 KRTAP4-5Q9BYR2 181 aa15.94■□□□□ 0.14
LSM6-202ENST00000502781 LINC00474Q9P2X8 69 aa15.94■□□□□ 0.14
LSM6-202ENST00000502781 TLX1NBP0CAT3 122 aa15.93■□□□□ 0.14
LSM6-202ENST00000502781 PTTG1IPP53801 180 aa15.93■□□□□ 0.14
LSM6-202ENST00000502781 COX7B2Q8TF08 81 aa15.93■□□□□ 0.14
LSM6-202ENST00000502781 A0A087WYN8 130 aa15.92■□□□□ 0.14
LSM6-202ENST00000502781 CXCL5P42830 114 aa15.92■□□□□ 0.14
LSM6-202ENST00000502781 CKS1BP61024 79 aa15.92■□□□□ 0.14
LSM6-202ENST00000502781 PLAC8Q9NZF1 115 aa15.92■□□□□ 0.14
LSM6-202ENST00000502781 MAJINQ3KP22 176 aa15.91■□□□□ 0.14
LSM6-202ENST00000502781 TMEM170BQ5T4T1 132 aa15.9■□□□□ 0.14
LSM6-202ENST00000502781 GAGE2BQ13066 116 aa15.88■□□□□ 0.13
LSM6-202ENST00000502781 DPH3Q96FX2 82 aa15.88■□□□□ 0.13
LSM6-202ENST00000502781 EPM2AB3EWF7 344 aa15.87■□□□□ 0.13
LSM6-202ENST00000502781 H0Y8G0 127 aa15.87■□□□□ 0.13
LSM6-202ENST00000502781 RPL18AQ02543 176 aaKnown RBP15.87■□□□□ 0.13
LSM6-202ENST00000502781 Q5VSD8 79 aa15.87■□□□□ 0.13
LSM6-202ENST00000502781 Q6ZRP5 223 aa15.87■□□□□ 0.13
LSM6-202ENST00000502781 C9orf116Q5BN46 136 aaPredicted RBP15.87■□□□□ 0.13
LSM6-202ENST00000502781 LINC00528Q8N1L1 170 aa15.87■□□□□ 0.13
LSM6-202ENST00000502781 TMEM223A0PJW6 202 aa15.86■□□□□ 0.13
LSM6-202ENST00000502781 STPG4Q8N801 248 aa15.86■□□□□ 0.13
LSM6-202ENST00000502781 MAP1LC3CQ9BXW4 147 aa15.86■□□□□ 0.13
LSM6-202ENST00000502781 NDUFC2-KCTD14E9PQ53 114 aa15.85■□□□□ 0.13
LSM6-202ENST00000502781 FAM229AH3BQW9 127 aa15.85■□□□□ 0.13
LSM6-202ENST00000502781 ABCA13Q86UQ4 5058 aa15.83■□□□□ 0.12
LSM6-202ENST00000502781 SYS1-DBNDD2H3BUS1 97 aa15.81■□□□□ 0.12
LSM6-202ENST00000502781 PLNP26678 52 aa15.81■□□□□ 0.12
LSM6-202ENST00000502781 A0A1W2PNN7 141 aa15.79■□□□□ 0.12
LSM6-202ENST00000502781 DPM2O94777 84 aa15.79■□□□□ 0.12
LSM6-202ENST00000502781 PMCHL2Q9BQD1 86 aa15.79■□□□□ 0.12
LSM6-202ENST00000502781 GAGE2EQ4V326 116 aa15.78■□□□□ 0.12
LSM6-202ENST00000502781 GAGE2DQ9UEU5 116 aa15.78■□□□□ 0.12
LSM6-202ENST00000502781 PCLOQ9Y6V0 5065 aa15.78■□□□□ 0.12
LSM6-202ENST00000502781 VPS13BQ7Z7G8 4022 aa15.77■□□□□ 0.12
LSM6-202ENST00000502781 KRTAP10-4P60372 401 aaPredicted RBP15.77■□□□□ 0.12
LSM6-202ENST00000502781 IGKCP01834 107 aa15.76■□□□□ 0.11
LSM6-202ENST00000502781 ZNF625Q96I27 306 aaPredicted RBP15.76■□□□□ 0.11
LSM6-202ENST00000502781 PLA2G1BP04054 148 aaKnown RBP15.75■□□□□ 0.11
LSM6-202ENST00000502781 SFTA2Q6UW10 78 aa15.75■□□□□ 0.11
LSM6-202ENST00000502781 PET117Q6UWS5 81 aa15.75■□□□□ 0.11
LSM6-202ENST00000502781 C3orf79P0CE67 100 aa15.75■□□□□ 0.11
LSM6-202ENST00000502781 C9orf129Q5T035 196 aaKnown RBP15.75■□□□□ 0.11
LSM6-202ENST00000502781 LINC01545Q5VT33 79 aa15.75■□□□□ 0.11
LSM6-202ENST00000502781 KRTAP7-1Q8IUC3 87 aa15.72■□□□□ 0.11
LSM6-202ENST00000502781 FAM168BA1KXE4 195 aa15.71■□□□□ 0.11
LSM6-202ENST00000502781 SRRM2Q9UQ35 2752 aaKnown RBP15.7■□□□□ 0.1
LSM6-202ENST00000502781 RPL37AP61513 92 aaKnown RBP15.7■□□□□ 0.1
LSM6-202ENST00000502781 HIST3H2BBQ8N257 126 aa15.7■□□□□ 0.1
LSM6-202ENST00000502781 C7orf33Q8WU49 177 aa15.7■□□□□ 0.1
LSM6-202ENST00000502781 ERG28Q9UKR5 140 aa15.69■□□□□ 0.1
LSM6-202ENST00000502781 XAGE1AQ9HD64 81 aa15.68■□□□□ 0.1
LSM6-202ENST00000502781 LEPROTO15243 131 aa15.67■□□□□ 0.1
LSM6-202ENST00000502781 KRTDAPP60985 99 aa15.67■□□□□ 0.1
LSM6-202ENST00000502781 COX17Q14061 63 aa15.67■□□□□ 0.1
LSM6-202ENST00000502781 TSPEAR-AS2P59090 65 aa15.66■□□□□ 0.1
LSM6-202ENST00000502781 HERVK_113P61574 105 aa15.66■□□□□ 0.1
LSM6-202ENST00000502781 PLEKHB2Q96CS7 222 aa15.66■□□□□ 0.1
LSM6-202ENST00000502781 S100A6P06703 90 aa15.65■□□□□ 0.1
LSM6-202ENST00000502781 HIST1H2BLQ99880 126 aa15.65■□□□□ 0.1
LSM6-202ENST00000502781 PFN2P35080 140 aa15.64■□□□□ 0.09
LSM6-202ENST00000502781 FAM19A5Q7Z5A7 132 aaPredicted RBP15.64■□□□□ 0.09
LSM6-202ENST00000502781 NDUFA12Q9UI09 145 aa15.64■□□□□ 0.09
LSM6-202ENST00000502781 PHF5AQ7RTV0 110 aaKnown RBP15.63■□□□□ 0.09
LSM6-202ENST00000502781 J3QQQ9 107 aa15.62■□□□□ 0.09
LSM6-202ENST00000502781 INAFM2P0DMQ5 153 aa15.62■□□□□ 0.09
LSM6-202ENST00000502781 HERV-K104P63124 156 aa15.62■□□□□ 0.09
LSM6-202ENST00000502781 SERTAD4-AS1Q5TG53 156 aa15.62■□□□□ 0.09
LSM6-202ENST00000502781 E9PLD3 99 aa15.62■□□□□ 0.09
LSM6-202ENST00000502781 S100A2P29034 98 aa15.61■□□□□ 0.09
LSM6-202ENST00000502781 MYMXA0A1B0GTQ4 84 aa15.6■□□□□ 0.09
LSM6-202ENST00000502781 SNRPEP62304 92 aaKnown RBP15.6■□□□□ 0.09
LSM6-202ENST00000502781 PLA2G2DQ9UNK4 145 aa15.6■□□□□ 0.09
LSM6-202ENST00000502781 C5orf52A6NGY3 159 aa15.59■□□□□ 0.09
LSM6-202ENST00000502781 M0QXV9 152 aa15.59■□□□□ 0.09
LSM6-202ENST00000502781 PRR3P79522 188 aaKnown RBP15.59■□□□□ 0.09
LSM6-202ENST00000502781 SND1-IT1Q9HBX3 110 aa15.59■□□□□ 0.09
LSM6-202ENST00000502781 FLG2Q5D862 2391 aaPredicted RBP15.58■□□□□ 0.08
LSM6-202ENST00000502781 C20orf202A1L168 122 aa15.58■□□□□ 0.08
LSM6-202ENST00000502781 NMUP48645 174 aa15.58■□□□□ 0.08
LSM6-202ENST00000502781 LGALS3P17931 250 aaKnown RBP15.56■□□□□ 0.08
LSM6-202ENST00000502781 HNRNPA3P51991 378 aaKnown RBP15.56■□□□□ 0.08
LSM6-202ENST00000502781 C22orf24Q9Y442 160 aa15.56■□□□□ 0.08
LSM6-202ENST00000502781 LINC00158P58513 81 aa15.55■□□□□ 0.08
LSM6-202ENST00000502781 TP73-AS1Q9UF72 201 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms