RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 IGHV4OR15-8A0A075B7B6 117 aa4.14□□□□□ -1.75
SOX2-OT-218ENST00000498731 A0A087WW49 117 aa4.14□□□□□ -1.75
SOX2-OT-218ENST00000498731 A0A087WZ39 114 aa4.14□□□□□ -1.75
SOX2-OT-218ENST00000498731 POLR2KP53803 58 aaKnown RBP4.14□□□□□ -1.75
SOX2-OT-218ENST00000498731 PDE6HQ13956 83 aa4.14□□□□□ -1.75
SOX2-OT-218ENST00000498731 NDUFA4O00483 81 aa4.13□□□□□ -1.75
SOX2-OT-218ENST00000498731 COX6CP09669 75 aa4.13□□□□□ -1.75
SOX2-OT-218ENST00000498731 RNASE3P12724 160 aaKnown RBP4.13□□□□□ -1.75
SOX2-OT-218ENST00000498731 MIAQ16674 131 aa4.13□□□□□ -1.75
SOX2-OT-218ENST00000498731 KIF25-AS1Q9Y6Z4 181 aa4.13□□□□□ -1.75
SOX2-OT-218ENST00000498731 IGHV4-4A0A075B6R2 117 aa4.13□□□□□ -1.75
SOX2-OT-218ENST00000498731 SDHAF1A6NFY7 115 aa4.13□□□□□ -1.75
SOX2-OT-218ENST00000498731 FAM74A4Q5TZK3 123 aa4.13□□□□□ -1.75
SOX2-OT-218ENST00000498731 NDUFA12Q9UI09 145 aa4.13□□□□□ -1.75
SOX2-OT-218ENST00000498731 PIK3CD-AS1Q5SR53 167 aa4.13□□□□□ -1.75
SOX2-OT-218ENST00000498731 ENHOQ6UWT2 76 aa4.13□□□□□ -1.75
SOX2-OT-218ENST00000498731 TRAV10A0A0B4J240 114 aa4.12□□□□□ -1.75
SOX2-OT-218ENST00000498731 TRBV27A0A0K0K1C4 114 aa4.12□□□□□ -1.75
SOX2-OT-218ENST00000498731 LRCOL1A6NCL2 159 aa4.12□□□□□ -1.75
SOX2-OT-218ENST00000498731 TGP01266 2768 aa4.12□□□□□ -1.75
SOX2-OT-218ENST00000498731 IGLV4-3A0A075B6K6 122 aa4.12□□□□□ -1.75
SOX2-OT-218ENST00000498731 COX7A2LO14548 114 aa4.12□□□□□ -1.75
SOX2-OT-218ENST00000498731 SPINK13Q1W4C9 94 aa4.12□□□□□ -1.75
SOX2-OT-218ENST00000498731 Q6YL49 198 aa4.12□□□□□ -1.75
SOX2-OT-218ENST00000498731 C11orf72Q8NBR9 251 aa4.12□□□□□ -1.75
SOX2-OT-218ENST00000498731 TMEM190Q8WZ59 177 aa4.12□□□□□ -1.75
SOX2-OT-218ENST00000498731 PHLDA3Q9Y5J5 127 aa4.12□□□□□ -1.75
SOX2-OT-218ENST00000498731 PKD1L1Q8TDX9 2849 aa4.12□□□□□ -1.75
SOX2-OT-218ENST00000498731 TRBV7-6A0A0J9YX20 115 aa4.12□□□□□ -1.75
SOX2-OT-218ENST00000498731 C8orf87E5RJ46 101 aa4.12□□□□□ -1.75
SOX2-OT-218ENST00000498731 F8WEM9 126 aa4.12□□□□□ -1.75
SOX2-OT-218ENST00000498731 CCKP06307 115 aa4.12□□□□□ -1.75
SOX2-OT-218ENST00000498731 PSMB8P28062 276 aa4.12□□□□□ -1.75
SOX2-OT-218ENST00000498731 KNCNA6PVL3 124 aa4.11□□□□□ -1.75
SOX2-OT-218ENST00000498731 M0R2N4 97 aa4.11□□□□□ -1.75
SOX2-OT-218ENST00000498731 PROK1P58294 105 aa4.11□□□□□ -1.75
SOX2-OT-218ENST00000498731 DEFB131AP59861 70 aa4.11□□□□□ -1.75
SOX2-OT-218ENST00000498731 SNRPD3P62318 126 aaKnown RBP4.11□□□□□ -1.75
SOX2-OT-218ENST00000498731 SERP1Q9Y6X1 66 aa4.11□□□□□ -1.75
SOX2-OT-218ENST00000498731 DNAJC9-AS1A6NH13 148 aa4.11□□□□□ -1.75
SOX2-OT-218ENST00000498731 TIMM17BO60830 172 aa4.11□□□□□ -1.75
SOX2-OT-218ENST00000498731 Q6ZTI0 123 aa4.11□□□□□ -1.75
SOX2-OT-218ENST00000498731 ZNF702PQ9H963 129 aa4.11□□□□□ -1.75
SOX2-OT-218ENST00000498731 DNHD1Q96M86 4753 aa4.11□□□□□ -1.75
SOX2-OT-218ENST00000498731 PRM2P04554 102 aa4.1□□□□□ -1.75
SOX2-OT-218ENST00000498731 PMAIP1Q13794 54 aa4.1□□□□□ -1.75
SOX2-OT-218ENST00000498731 ZFAND2AQ8N6M9 145 aa4.1□□□□□ -1.75
SOX2-OT-218ENST00000498731 TIMM17AQ99595 171 aa4.1□□□□□ -1.75
SOX2-OT-218ENST00000498731 SPANXDQ9BXN6 97 aa4.1□□□□□ -1.75
SOX2-OT-218ENST00000498731 SPANXCQ9NY87 97 aa4.1□□□□□ -1.75
SOX2-OT-218ENST00000498731 A0A096LNT2 108 aa4.1□□□□□ -1.75
SOX2-OT-218ENST00000498731 INAFM2P0DMQ5 153 aa4.1□□□□□ -1.75
SOX2-OT-218ENST00000498731 CSMD3Q7Z407 3707 aa4.1□□□□□ -1.75
SOX2-OT-218ENST00000498731 IGHV3-73A0A0B4J1V6 119 aa4.1□□□□□ -1.75
SOX2-OT-218ENST00000498731 RBMY1BA6NDE4 496 aaKnown RBP4.1□□□□□ -1.75
SOX2-OT-218ENST00000498731 RBMY1EA6NEQ0 496 aaKnown RBP4.1□□□□□ -1.75
SOX2-OT-218ENST00000498731 RBMY1DP0C7P1 496 aaKnown RBP4.1□□□□□ -1.75
SOX2-OT-218ENST00000498731 RBMY1A1P0DJD3 496 aaKnown RBP4.1□□□□□ -1.75
SOX2-OT-218ENST00000498731 COX6A2Q02221 97 aa4.1□□□□□ -1.75
SOX2-OT-218ENST00000498731 RBMY1FQ15415 496 aaKnown RBP4.1□□□□□ -1.75
SOX2-OT-218ENST00000498731 Q6JHZ5 121 aa4.1□□□□□ -1.75
SOX2-OT-218ENST00000498731 LINC00308Q8TCZ7 52 aa4.1□□□□□ -1.75
SOX2-OT-218ENST00000498731 IGLV1-40P01703 118 aa4.09□□□□□ -1.75
SOX2-OT-218ENST00000498731 KRTAP1-3Q8IUG1 177 aa4.09□□□□□ -1.75
SOX2-OT-218ENST00000498731 CR1P17927 2039 aa4.09□□□□□ -1.75
SOX2-OT-218ENST00000498731 TRAV21A0A0B4J279 112 aa4.09□□□□□ -1.75
SOX2-OT-218ENST00000498731 A0A0J9YX75 114 aa4.09□□□□□ -1.75
SOX2-OT-218ENST00000498731 H3BUA1 57 aa4.09□□□□□ -1.75
SOX2-OT-218ENST00000498731 DNAL4O96015 105 aa4.09□□□□□ -1.75
SOX2-OT-218ENST00000498731 CD28P10747 220 aa4.09□□□□□ -1.75
SOX2-OT-218ENST00000498731 CFHR3Q02985 330 aa4.09□□□□□ -1.76
SOX2-OT-218ENST00000498731 VSIG2Q96IQ7 327 aa4.09□□□□□ -1.76
SOX2-OT-218ENST00000498731 CDKN2A-AS1Q9UH64 79 aa4.09□□□□□ -1.76
SOX2-OT-218ENST00000498731 IGHV1-58A0A0C4DH39 117 aa4.08□□□□□ -1.76
SOX2-OT-218ENST00000498731 TMEM141Q96I45 108 aa4.08□□□□□ -1.76
SOX2-OT-218ENST00000498731 ESM1Q9NQ30 184 aa4.08□□□□□ -1.76
SOX2-OT-218ENST00000498731 SMIM26A0A096LP01 95 aa4.08□□□□□ -1.76
SOX2-OT-218ENST00000498731 IGKV2-29A2NJV5 120 aaPredicted RBP4.08□□□□□ -1.76
SOX2-OT-218ENST00000498731 NDUFC2O95298 119 aa4.08□□□□□ -1.76
SOX2-OT-218ENST00000498731 LINC00337Q8N6G1 96 aa4.08□□□□□ -1.76
SOX2-OT-218ENST00000498731 TRRAPQ9Y4A5 3859 aa4.08□□□□□ -1.76
SOX2-OT-218ENST00000498731 C6orf223Q8N319 242 aa4.08□□□□□ -1.76
SOX2-OT-218ENST00000498731 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.07□□□□□ -1.76
SOX2-OT-218ENST00000498731 MIR7-3HGQ8N6C7 128 aa4.07□□□□□ -1.76
SOX2-OT-218ENST00000498731 C20orf203Q8NBC4 194 aa4.07□□□□□ -1.76
SOX2-OT-218ENST00000498731 TM2D3Q9BRN9 247 aa4.07□□□□□ -1.76
SOX2-OT-218ENST00000498731 VWFP04275 2813 aa4.07□□□□□ -1.76
SOX2-OT-218ENST00000498731 PAX4O43316 350 aa4.07□□□□□ -1.76
SOX2-OT-218ENST00000498731 RBM12B-AS1Q9P1G2 102 aa4.07□□□□□ -1.76
SOX2-OT-218ENST00000498731 IGKV2-28A0A075B6P5 120 aa4.06□□□□□ -1.76
SOX2-OT-218ENST00000498731 M0QY20 66 aa4.06□□□□□ -1.76
SOX2-OT-218ENST00000498731 IGKV2D-28P01615 120 aa4.06□□□□□ -1.76
SOX2-OT-218ENST00000498731 MRPL55Q7Z7F7 128 aaKnown RBP4.06□□□□□ -1.76
SOX2-OT-218ENST00000498731 IGHV3-38A0A0C4DH36 116 aa4.06□□□□□ -1.76
SOX2-OT-218ENST00000498731 MRPS36P82909 103 aaKnown RBP4.06□□□□□ -1.76
SOX2-OT-218ENST00000498731 LECT2O14960 151 aa4.06□□□□□ -1.76
SOX2-OT-218ENST00000498731 REG3AQ06141 175 aa4.05□□□□□ -1.76
SOX2-OT-218ENST00000498731 SCXQ7RTU7 201 aa4.05□□□□□ -1.76
SOX2-OT-218ENST00000498731 LINC01006Q8NI28 216 aa4.05□□□□□ -1.76
SOX2-OT-218ENST00000498731 OBSCN-AS1Q96MR7 158 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms