RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 H0Y8G0 127 aa12.62□□□□□ -0.39
HLA-B-255ENST00000498007 H3BRM9 83 aa12.62□□□□□ -0.39
HLA-B-255ENST00000498007 CIRBPQ14011 172 aaKnown RBP12.62□□□□□ -0.39
HLA-B-255ENST00000498007 MAJINQ3KP22 176 aa12.62□□□□□ -0.39
HLA-B-255ENST00000498007 Q8IZM0 81 aa12.62□□□□□ -0.39
HLA-B-255ENST00000498007 CHTOPQ9Y3Y2 248 aaKnown RBP12.62□□□□□ -0.39
HLA-B-255ENST00000498007 ABCA13Q86UQ4 5058 aa12.62□□□□□ -0.39
HLA-B-255ENST00000498007 CKS1BP61024 79 aa12.61□□□□□ -0.39
HLA-B-255ENST00000498007 RPL18AQ02543 176 aaKnown RBP12.61□□□□□ -0.39
HLA-B-255ENST00000498007 C6orf226Q5I0X4 101 aa12.61□□□□□ -0.39
HLA-B-255ENST00000498007 C6orf48Q9UBA6 75 aa12.61□□□□□ -0.39
HLA-B-255ENST00000498007 TRAV12-1A0A0B4J245 112 aa12.6□□□□□ -0.39
HLA-B-255ENST00000498007 C11orf86A6NJI1 115 aa12.6□□□□□ -0.39
HLA-B-255ENST00000498007 EPM2AB3EWF7 344 aa12.6□□□□□ -0.39
HLA-B-255ENST00000498007 FABP4P15090 132 aa12.6□□□□□ -0.39
HLA-B-255ENST00000498007 ZNF22P17026 224 aaPredicted RBP12.6□□□□□ -0.39
HLA-B-255ENST00000498007 GAGE2BQ13066 116 aa12.6□□□□□ -0.39
HLA-B-255ENST00000498007 Q5VSD8 79 aa12.6□□□□□ -0.39
HLA-B-255ENST00000498007 KRTAP4-5Q9BYR2 181 aa12.6□□□□□ -0.39
HLA-B-255ENST00000498007 RNF151Q2KHN1 245 aa12.59□□□□□ -0.39
HLA-B-255ENST00000498007 LINC00528Q8N1L1 170 aa12.59□□□□□ -0.39
HLA-B-255ENST00000498007 HSPB8Q9UJY1 196 aa12.59□□□□□ -0.39
HLA-B-255ENST00000498007 A0A087WYN8 130 aa12.58□□□□□ -0.4
HLA-B-255ENST00000498007 TMEM170BQ5T4T1 132 aa12.58□□□□□ -0.4
HLA-B-255ENST00000498007 COX7B2Q8TF08 81 aa12.58□□□□□ -0.4
HLA-B-255ENST00000498007 FAM229AH3BQW9 127 aa12.57□□□□□ -0.4
HLA-B-255ENST00000498007 PTTG1IPP53801 180 aa12.57□□□□□ -0.4
HLA-B-255ENST00000498007 LINC00474Q9P2X8 69 aa12.57□□□□□ -0.4
HLA-B-255ENST00000498007 TRBV30A0A0K0K1B3 111 aa12.56□□□□□ -0.4
HLA-B-255ENST00000498007 F8VRH5 84 aa12.56□□□□□ -0.4
HLA-B-255ENST00000498007 STPG4Q8N801 248 aa12.56□□□□□ -0.4
HLA-B-255ENST00000498007 PCLOQ9Y6V0 5065 aa12.55□□□□□ -0.4
HLA-B-255ENST00000498007 CXCL5P42830 114 aa12.54□□□□□ -0.4
HLA-B-255ENST00000498007 C9orf116Q5BN46 136 aaPredicted RBP12.54□□□□□ -0.4
HLA-B-255ENST00000498007 VPS13BQ7Z7G8 4022 aa12.53□□□□□ -0.4
HLA-B-255ENST00000498007 ODF1Q14990 250 aa12.53□□□□□ -0.4
HLA-B-255ENST00000498007 PLAC8Q9NZF1 115 aa12.53□□□□□ -0.4
HLA-B-255ENST00000498007 TMA7Q9Y2S6 64 aaKnown RBP12.53□□□□□ -0.4
HLA-B-255ENST00000498007 TLX1NBP0CAT3 122 aa12.52□□□□□ -0.41
HLA-B-255ENST00000498007 Q6ZRP5 223 aa12.52□□□□□ -0.41
HLA-B-255ENST00000498007 IGLV5-39A0A0G2JS06 123 aa12.51□□□□□ -0.41
HLA-B-255ENST00000498007 GAGE2EQ4V326 116 aa12.51□□□□□ -0.41
HLA-B-255ENST00000498007 MAP1LC3CQ9BXW4 147 aa12.51□□□□□ -0.41
HLA-B-255ENST00000498007 GAGE2DQ9UEU5 116 aa12.51□□□□□ -0.41
HLA-B-255ENST00000498007 NDUFC2-KCTD14E9PQ53 114 aa12.5□□□□□ -0.41
HLA-B-255ENST00000498007 COA6Q5JTJ3 125 aaKnown RBP12.49□□□□□ -0.41
HLA-B-255ENST00000498007 PMCHL2Q9BQD1 86 aa12.49□□□□□ -0.41
HLA-B-255ENST00000498007 TMEM223A0PJW6 202 aa12.48□□□□□ -0.41
HLA-B-255ENST00000498007 PLA2G1BP04054 148 aaKnown RBP12.48□□□□□ -0.41
HLA-B-255ENST00000498007 A0A1W2PNN7 141 aa12.46□□□□□ -0.41
HLA-B-255ENST00000498007 PLNP26678 52 aa12.46□□□□□ -0.41
HLA-B-255ENST00000498007 RPL37AP61513 92 aaKnown RBP12.46□□□□□ -0.41
HLA-B-255ENST00000498007 DPM2O94777 84 aa12.45□□□□□ -0.42
HLA-B-255ENST00000498007 C7orf33Q8WU49 177 aa12.45□□□□□ -0.42
HLA-B-255ENST00000498007 FAM168BA1KXE4 195 aa12.44□□□□□ -0.42
HLA-B-255ENST00000498007 SYS1-DBNDD2H3BUS1 97 aa12.43□□□□□ -0.42
HLA-B-255ENST00000498007 IGKCP01834 107 aa12.43□□□□□ -0.42
HLA-B-255ENST00000498007 FAM19A5Q7Z5A7 132 aaPredicted RBP12.43□□□□□ -0.42
HLA-B-255ENST00000498007 C9orf129Q5T035 196 aaKnown RBP12.42□□□□□ -0.42
HLA-B-255ENST00000498007 XAGE1AQ9HD64 81 aa12.42□□□□□ -0.42
HLA-B-255ENST00000498007 SRRM2Q9UQ35 2752 aaKnown RBP12.41□□□□□ -0.42
HLA-B-255ENST00000498007 INAFM2P0DMQ5 153 aa12.41□□□□□ -0.42
HLA-B-255ENST00000498007 ZNF625Q96I27 306 aaPredicted RBP12.41□□□□□ -0.42
HLA-B-255ENST00000498007 PFN2P35080 140 aa12.39□□□□□ -0.43
HLA-B-255ENST00000498007 KRTAP10-4P60372 401 aaPredicted RBP12.39□□□□□ -0.43
HLA-B-255ENST00000498007 KRTDAPP60985 99 aa12.39□□□□□ -0.43
HLA-B-255ENST00000498007 SFTA2Q6UW10 78 aa12.39□□□□□ -0.43
HLA-B-255ENST00000498007 C3orf79P0CE67 100 aa12.38□□□□□ -0.43
HLA-B-255ENST00000498007 HERVK_113P61574 105 aa12.38□□□□□ -0.43
HLA-B-255ENST00000498007 PHF5AQ7RTV0 110 aaKnown RBP12.38□□□□□ -0.43
HLA-B-255ENST00000498007 ERG28Q9UKR5 140 aa12.38□□□□□ -0.43
HLA-B-255ENST00000498007 PET117Q6UWS5 81 aa12.37□□□□□ -0.43
HLA-B-255ENST00000498007 M0QXV9 152 aa12.35□□□□□ -0.43
HLA-B-255ENST00000498007 LEPROTO15243 131 aa12.35□□□□□ -0.43
HLA-B-255ENST00000498007 S100A6P06703 90 aa12.35□□□□□ -0.43
HLA-B-255ENST00000498007 TSPEAR-AS2P59090 65 aa12.35□□□□□ -0.43
HLA-B-255ENST00000498007 LINC01545Q5VT33 79 aa12.35□□□□□ -0.43
HLA-B-255ENST00000498007 KRTAP7-1Q8IUC3 87 aa12.35□□□□□ -0.43
HLA-B-255ENST00000498007 SERTAD4-AS1Q5TG53 156 aa12.34□□□□□ -0.43
HLA-B-255ENST00000498007 PLEKHB2Q96CS7 222 aa12.34□□□□□ -0.43
HLA-B-255ENST00000498007 NDUFA12Q9UI09 145 aa12.34□□□□□ -0.43
HLA-B-255ENST00000498007 PKHD1L1Q86WI1 4243 aa12.33□□□□□ -0.44
HLA-B-255ENST00000498007 S100A2P29034 98 aa12.33□□□□□ -0.44
HLA-B-255ENST00000498007 PRR3P79522 188 aaKnown RBP12.33□□□□□ -0.44
HLA-B-255ENST00000498007 HIST3H2BBQ8N257 126 aa12.33□□□□□ -0.44
HLA-B-255ENST00000498007 J3QQQ9 107 aa12.32□□□□□ -0.44
HLA-B-255ENST00000498007 COX17Q14061 63 aa12.32□□□□□ -0.44
HLA-B-255ENST00000498007 A0A0U1RRA0 63 aa12.31□□□□□ -0.44
HLA-B-255ENST00000498007 LGALS3P17931 250 aaKnown RBP12.31□□□□□ -0.44
HLA-B-255ENST00000498007 MEIG1Q5JSS6 88 aa12.31□□□□□ -0.44
HLA-B-255ENST00000498007 MYMXA0A1B0GTQ4 84 aa12.3□□□□□ -0.44
HLA-B-255ENST00000498007 C20orf202A1L168 122 aa12.3□□□□□ -0.44
HLA-B-255ENST00000498007 HNRNPA3P51991 378 aaKnown RBP12.3□□□□□ -0.44
HLA-B-255ENST00000498007 LINC00158P58513 81 aa12.3□□□□□ -0.44
HLA-B-255ENST00000498007 HERV-K104P63124 156 aa12.3□□□□□ -0.44
HLA-B-255ENST00000498007 UBE2BP63146 152 aa12.29□□□□□ -0.44
HLA-B-255ENST00000498007 HIST1H2BLQ99880 126 aa12.29□□□□□ -0.44
HLA-B-255ENST00000498007 SND1-IT1Q9HBX3 110 aa12.29□□□□□ -0.44
HLA-B-255ENST00000498007 MYCBP2O75592 4640 aa12.29□□□□□ -0.44
HLA-B-255ENST00000498007 LOC105371267A0A1B0GV96 52 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms