RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.21□□□□□ -1.09
SNRNP200-208ENST00000497539 IGHV3-38A0A0C4DH36 116 aa8.21□□□□□ -1.09
SNRNP200-208ENST00000497539 TRBV30A0A0K0K1B3 111 aa8.21□□□□□ -1.09
SNRNP200-208ENST00000497539 IGKV2-29A2NJV5 120 aaPredicted RBP8.21□□□□□ -1.09
SNRNP200-208ENST00000497539 CHCHD7Q9BUK0 85 aa8.21□□□□□ -1.1
SNRNP200-208ENST00000497539 WFDC10AQ9H1F0 79 aa8.21□□□□□ -1.1
SNRNP200-208ENST00000497539 MAST4O15021 2626 aa8.2□□□□□ -1.1
SNRNP200-208ENST00000497539 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.2□□□□□ -1.1
SNRNP200-208ENST00000497539 MRPS36P82909 103 aaKnown RBP8.19□□□□□ -1.1
SNRNP200-208ENST00000497539 LINC00612Q8N6U2 182 aa8.19□□□□□ -1.1
SNRNP200-208ENST00000497539 ZNF625Q96I27 306 aaPredicted RBP8.19□□□□□ -1.1
SNRNP200-208ENST00000497539 TRGV1A0A0A0MS02 117 aa8.19□□□□□ -1.1
SNRNP200-208ENST00000497539 IGHV1-58A0A0C4DH39 117 aa8.19□□□□□ -1.1
SNRNP200-208ENST00000497539 FHL2Q14192 279 aa8.19□□□□□ -1.1
SNRNP200-208ENST00000497539 WFDC9Q8NEX5 89 aa8.19□□□□□ -1.1
SNRNP200-208ENST00000497539 K7EQD1 137 aa8.18□□□□□ -1.1
SNRNP200-208ENST00000497539 Q6ZTI0 123 aa8.18□□□□□ -1.1
SNRNP200-208ENST00000497539 PRR15Q8IV56 129 aa8.18□□□□□ -1.1
SNRNP200-208ENST00000497539 VSIG2Q96IQ7 327 aa8.18□□□□□ -1.1
SNRNP200-208ENST00000497539 IGHV3OR16-12A0A075B7B8 117 aa8.17□□□□□ -1.1
SNRNP200-208ENST00000497539 MIAQ16674 131 aa8.17□□□□□ -1.1
SNRNP200-208ENST00000497539 DAZ4Q86SG3 579 aaKnown RBP8.17□□□□□ -1.1
SNRNP200-208ENST00000497539 COPS9Q8WXC6 57 aa8.17□□□□□ -1.1
SNRNP200-208ENST00000497539 DAZ3Q9NR90 486 aaKnown RBP8.17□□□□□ -1.1
SNRNP200-208ENST00000497539 UBE2D4Q9Y2X8 147 aa8.17□□□□□ -1.1
SNRNP200-208ENST00000497539 COX6CP09669 75 aa8.16□□□□□ -1.1
SNRNP200-208ENST00000497539 CDKN2A-AS1Q9UH64 79 aa8.16□□□□□ -1.1
SNRNP200-208ENST00000497539 TRBV6-4A0A1B0GX49 114 aa8.16□□□□□ -1.1
SNRNP200-208ENST00000497539 NOP10Q9NPE3 64 aaKnown RBP8.16□□□□□ -1.1
SNRNP200-208ENST00000497539 LAMTOR3Q9UHA4 124 aa8.16□□□□□ -1.1
SNRNP200-208ENST00000497539 NSD1Q96L73 2696 aaPredicted RBP8.16□□□□□ -1.1
SNRNP200-208ENST00000497539 RPL36AP83881 106 aaKnown RBP8.15□□□□□ -1.1
SNRNP200-208ENST00000497539 RPL36ALQ969Q0 106 aaKnown RBP8.15□□□□□ -1.1
SNRNP200-208ENST00000497539 NF1P21359 2839 aa8.15□□□□□ -1.11
SNRNP200-208ENST00000497539 FAM19A3Q7Z5A8 133 aa8.15□□□□□ -1.11
SNRNP200-208ENST00000497539 SPATA3Q8NHX4 192 aa8.15□□□□□ -1.11
SNRNP200-208ENST00000497539 TMEM243Q9BU79 118 aa8.15□□□□□ -1.11
SNRNP200-208ENST00000497539 MTORP42345 2549 aa8.14□□□□□ -1.11
SNRNP200-208ENST00000497539 LST1O00453 97 aa8.14□□□□□ -1.11
SNRNP200-208ENST00000497539 COX6A2Q02221 97 aa8.14□□□□□ -1.11
SNRNP200-208ENST00000497539 X6R8D5 127 aa8.14□□□□□ -1.11
SNRNP200-208ENST00000497539 FN1P02751 2386 aaKnown RBP8.13□□□□□ -1.11
SNRNP200-208ENST00000497539 NIPBLQ6KC79 2804 aaeCLIP8.13□□□□□ -1.11
SNRNP200-208ENST00000497539 DGAT2L7PQ6IED9 249 aa8.12□□□□□ -1.11
SNRNP200-208ENST00000497539 IGLV5-45A0A087WSX0 123 aa8.11□□□□□ -1.11
SNRNP200-208ENST00000497539 APOC4P55056 127 aa8.11□□□□□ -1.11
SNRNP200-208ENST00000497539 Q9H8V8 135 aa8.11□□□□□ -1.11
SNRNP200-208ENST00000497539 TRBV7-6A0A0J9YX20 115 aa8.11□□□□□ -1.11
SNRNP200-208ENST00000497539 TRGV2A0A075B6R0 118 aa8.1□□□□□ -1.11
SNRNP200-208ENST00000497539 NTM-AS1Q6ZSK4 140 aa8.1□□□□□ -1.11
SNRNP200-208ENST00000497539 MRPL55Q7Z7F7 128 aaKnown RBP8.1□□□□□ -1.11
SNRNP200-208ENST00000497539 LYRM9A8MSI8 78 aa8.1□□□□□ -1.11
SNRNP200-208ENST00000497539 USP17L23D6RBM5 183 aa8.1□□□□□ -1.11
SNRNP200-208ENST00000497539 WNK1Q9H4A3 2382 aa8.1□□□□□ -1.11
SNRNP200-208ENST00000497539 SETD2Q9BYW2 2564 aaPredicted RBP8.09□□□□□ -1.11
SNRNP200-208ENST00000497539 PAX4O43316 350 aa8.09□□□□□ -1.11
SNRNP200-208ENST00000497539 SOSTDC1Q6X4U4 206 aa8.09□□□□□ -1.11
SNRNP200-208ENST00000497539 LINC00308Q8TCZ7 52 aa8.09□□□□□ -1.11
SNRNP200-208ENST00000497539 H7BZZ5 65 aa8.09□□□□□ -1.11
SNRNP200-208ENST00000497539 LYPD5Q6UWN5 251 aa8.09□□□□□ -1.11
SNRNP200-208ENST00000497539 HIVEP1P15822 2718 aa8.08□□□□□ -1.12
SNRNP200-208ENST00000497539 SS18Q15532 418 aa8.08□□□□□ -1.12
SNRNP200-208ENST00000497539 NDUFA1O15239 70 aa8.07□□□□□ -1.12
SNRNP200-208ENST00000497539 CIRBPQ14011 172 aaKnown RBP8.07□□□□□ -1.12
SNRNP200-208ENST00000497539 TRGV4A0A0C4DH28 118 aa8.07□□□□□ -1.12
SNRNP200-208ENST00000497539 Q6JHZ5 121 aa8.07□□□□□ -1.12
SNRNP200-208ENST00000497539 JMJD1CQ15652 2540 aa8.07□□□□□ -1.12
SNRNP200-208ENST00000497539 CCKP06307 115 aa8.06□□□□□ -1.12
SNRNP200-208ENST00000497539 LINC00242Q5T6M2 205 aa8.06□□□□□ -1.12
SNRNP200-208ENST00000497539 C11orf45Q8TAV5 145 aa8.06□□□□□ -1.12
SNRNP200-208ENST00000497539 LINC00474Q9P2X8 69 aa8.06□□□□□ -1.12
SNRNP200-208ENST00000497539 XCL1P47992 114 aa8.06□□□□□ -1.12
SNRNP200-208ENST00000497539 MIFP14174 115 aa8.06□□□□□ -1.12
SNRNP200-208ENST00000497539 KRTAP24-1Q3LI83 254 aa8.05□□□□□ -1.12
SNRNP200-208ENST00000497539 FAM218AQ96MZ4 157 aa8.05□□□□□ -1.12
SNRNP200-208ENST00000497539 Q9HAA7 133 aa8.05□□□□□ -1.12
SNRNP200-208ENST00000497539 CDC42SE2Q9NRR3 84 aa8.05□□□□□ -1.12
SNRNP200-208ENST00000497539 COX7A2LO14548 114 aa8.05□□□□□ -1.12
SNRNP200-208ENST00000497539 TIMM17BO60830 172 aa8.05□□□□□ -1.12
SNRNP200-208ENST00000497539 BAALC-AS2P0C853 105 aa8.05□□□□□ -1.12
SNRNP200-208ENST00000497539 EGFEM1PQ0D2K5 195 aa8.05□□□□□ -1.12
SNRNP200-208ENST00000497539 Q8NAQ8 132 aa8.04□□□□□ -1.12
SNRNP200-208ENST00000497539 F8P00451 2351 aa8.03□□□□□ -1.12
SNRNP200-208ENST00000497539 TRBV6-8A0A0A6YYG3 113 aa8.03□□□□□ -1.12
SNRNP200-208ENST00000497539 IGLV5-39A0A0G2JS06 123 aa8.03□□□□□ -1.12
SNRNP200-208ENST00000497539 LOC100131303A0A0U1RQF7 123 aa8.03□□□□□ -1.12
SNRNP200-208ENST00000497539 SMIM1B2RUZ4 78 aa8.03□□□□□ -1.12
SNRNP200-208ENST00000497539 PRO0255Q9UI72 69 aa8.03□□□□□ -1.12
SNRNP200-208ENST00000497539 ATP5EP56381 51 aaPredicted RBP8.02□□□□□ -1.13
SNRNP200-208ENST00000497539 IGHV4-28A0A0C4DH34 117 aa8.02□□□□□ -1.13
SNRNP200-208ENST00000497539 IGKV3OR2-268A0A0C4DH90 116 aa8.02□□□□□ -1.13
SNRNP200-208ENST00000497539 IGHV4-30-4P0DP06 118 aa8.02□□□□□ -1.13
SNRNP200-208ENST00000497539 FAM222AQ5U5X8 452 aa8.02□□□□□ -1.13
SNRNP200-208ENST00000497539 RBM12B-AS1Q9P1G2 102 aa8.02□□□□□ -1.13
SNRNP200-208ENST00000497539 C22orf24Q9Y442 160 aa8.02□□□□□ -1.13
SNRNP200-208ENST00000497539 UBE2L6O14933 153 aa8.01□□□□□ -1.13
SNRNP200-208ENST00000497539 DEFB135Q30KP9 77 aa8.01□□□□□ -1.13
SNRNP200-208ENST00000497539 TM2D3Q9BRN9 247 aa8.01□□□□□ -1.13
SNRNP200-208ENST00000497539 TEP1Q99973 2627 aaKnown RBP8.01□□□□□ -1.13
SNRNP200-208ENST00000497539 DEFB130BP0DP73 79 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms