RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 PKIGQ9Y2B9 76 aa9.41□□□□□ -0.9
NEK4-206ENST00000496822 IGLV4-3A0A075B6K6 122 aa9.4□□□□□ -0.9
NEK4-206ENST00000496822 GAGE2BQ13066 116 aa9.4□□□□□ -0.9
NEK4-206ENST00000496822 CAMK2N2Q96S95 79 aa9.4□□□□□ -0.9
NEK4-206ENST00000496822 LOC107984640A0A0U1RRK4 108 aa9.39□□□□□ -0.91
NEK4-206ENST00000496822 IFITM10A6NMD0 228 aa9.39□□□□□ -0.91
NEK4-206ENST00000496822 NUPR1O60356 82 aa9.39□□□□□ -0.91
NEK4-206ENST00000496822 SPAG11BQ08648 103 aa9.39□□□□□ -0.91
NEK4-206ENST00000496822 IFI27L1Q96BM0 104 aa9.39□□□□□ -0.91
NEK4-206ENST00000496822 A0A0J9YXV3 536 aa9.38□□□□□ -0.91
NEK4-206ENST00000496822 PMVKQ15126 192 aa9.38□□□□□ -0.91
NEK4-206ENST00000496822 C2orf48Q96LS8 159 aa9.38□□□□□ -0.91
NEK4-206ENST00000496822 TMA7Q9Y2S6 64 aaKnown RBP9.38□□□□□ -0.91
NEK4-206ENST00000496822 A0A1W2PNN7 141 aa9.37□□□□□ -0.91
NEK4-206ENST00000496822 APOMO95445 188 aa9.37□□□□□ -0.91
NEK4-206ENST00000496822 FABP4P15090 132 aa9.37□□□□□ -0.91
NEK4-206ENST00000496822 SEC11AP67812 179 aa9.37□□□□□ -0.91
NEK4-206ENST00000496822 MAP1LC3CQ9BXW4 147 aa9.37□□□□□ -0.91
NEK4-206ENST00000496822 IGHV3OR16-9A0A0B4J2B5 98 aa9.36□□□□□ -0.91
NEK4-206ENST00000496822 SNRPEP62304 92 aaKnown RBP9.36□□□□□ -0.91
NEK4-206ENST00000496822 HIST3H2BBQ8N257 126 aa9.36□□□□□ -0.91
NEK4-206ENST00000496822 ORAOV1Q8WV07 137 aa9.36□□□□□ -0.91
NEK4-206ENST00000496822 AMELXQ99217 191 aa9.36□□□□□ -0.91
NEK4-206ENST00000496822 RPL18AQ02543 176 aaKnown RBP9.35□□□□□ -0.91
NEK4-206ENST00000496822 OR10D4PQ8NGN7 298 aa9.35□□□□□ -0.91
NEK4-206ENST00000496822 TRAV12-1A0A0B4J245 112 aa9.34□□□□□ -0.91
NEK4-206ENST00000496822 C5orf52A6NGY3 159 aa9.34□□□□□ -0.91
NEK4-206ENST00000496822 CST9LQ9H4G1 147 aa9.34□□□□□ -0.91
NEK4-206ENST00000496822 ODF1Q14990 250 aa9.33□□□□□ -0.92
NEK4-206ENST00000496822 C9orf116Q5BN46 136 aaPredicted RBP9.33□□□□□ -0.92
NEK4-206ENST00000496822 C10orf25Q5T742 122 aa9.33□□□□□ -0.92
NEK4-206ENST00000496822 Q6ZRP5 223 aa9.33□□□□□ -0.92
NEK4-206ENST00000496822 LINC00173Q6ZV60 143 aa9.33□□□□□ -0.92
NEK4-206ENST00000496822 LINC01600Q96MT4 127 aa9.33□□□□□ -0.92
NEK4-206ENST00000496822 UBE2D1P51668 147 aa9.32□□□□□ -0.92
NEK4-206ENST00000496822 GEMIN7Q9H840 131 aaKnown RBP9.32□□□□□ -0.92
NEK4-206ENST00000496822 MRPL35Q9NZE8 188 aaKnown RBP9.32□□□□□ -0.92
NEK4-206ENST00000496822 H0Y8G0 127 aa9.31□□□□□ -0.92
NEK4-206ENST00000496822 HERVK_113P63121 156 aa9.31□□□□□ -0.92
NEK4-206ENST00000496822 SRSF9Q13242 221 aaKnown RBP eCLIP9.31□□□□□ -0.92
NEK4-206ENST00000496822 RNF151Q2KHN1 245 aa9.31□□□□□ -0.92
NEK4-206ENST00000496822 LINC00242Q5T6M2 205 aa9.31□□□□□ -0.92
NEK4-206ENST00000496822 SPINK6Q6UWN8 80 aa9.31□□□□□ -0.92
NEK4-206ENST00000496822 HIST1H2BLQ99880 126 aa9.31□□□□□ -0.92
NEK4-206ENST00000496822 CHTOPQ9Y3Y2 248 aaKnown RBP9.31□□□□□ -0.92
NEK4-206ENST00000496822 C20orf202A1L168 122 aa9.3□□□□□ -0.92
NEK4-206ENST00000496822 AKR1D1P51857 326 aa9.3□□□□□ -0.92
NEK4-206ENST00000496822 KRTDAPP60985 99 aa9.3□□□□□ -0.92
NEK4-206ENST00000496822 ZC2HC1BQ5TFG8 222 aa9.3□□□□□ -0.92
NEK4-206ENST00000496822 PET117Q6UWS5 81 aa9.3□□□□□ -0.92
NEK4-206ENST00000496822 UNQ6190/PRO20217Q6UXQ8 127 aa9.3□□□□□ -0.92
NEK4-206ENST00000496822 PHF5AQ7RTV0 110 aaKnown RBP9.3□□□□□ -0.92
NEK4-206ENST00000496822 FAM19A3Q7Z5A8 133 aa9.3□□□□□ -0.92
NEK4-206ENST00000496822 C6orf48Q9UBA6 75 aa9.3□□□□□ -0.92
NEK4-206ENST00000496822 A0A087WZ39 114 aa9.29□□□□□ -0.92
NEK4-206ENST00000496822 TINCRA0A1B0GVN0 87 aa9.29□□□□□ -0.92
NEK4-206ENST00000496822 F8VRH5 84 aa9.29□□□□□ -0.92
NEK4-206ENST00000496822 SYS1-DBNDD2H3BUS1 97 aa9.29□□□□□ -0.92
NEK4-206ENST00000496822 NDUFA1O15239 70 aa9.29□□□□□ -0.92
NEK4-206ENST00000496822 FAM168BA1KXE4 195 aa9.28□□□□□ -0.92
NEK4-206ENST00000496822 PLNP26678 52 aa9.28□□□□□ -0.92
NEK4-206ENST00000496822 KIAA0087Q14695 138 aa9.28□□□□□ -0.92
NEK4-206ENST00000496822 PSORS1C2Q9UIG4 136 aa9.28□□□□□ -0.92
NEK4-206ENST00000496822 F8WDY8 70 aa9.27□□□□□ -0.93
NEK4-206ENST00000496822 H3BRM9 83 aa9.27□□□□□ -0.93
NEK4-206ENST00000496822 C3orf79P0CE67 100 aa9.27□□□□□ -0.93
NEK4-206ENST00000496822 IGLC3P0DOY3 106 aa9.27□□□□□ -0.93
NEK4-206ENST00000496822 DPM2O94777 84 aa9.26□□□□□ -0.93
NEK4-206ENST00000496822 KRTAP10-8P60410 259 aa9.26□□□□□ -0.93
NEK4-206ENST00000496822 REG3GQ6UW15 175 aa9.26□□□□□ -0.93
NEK4-206ENST00000496822 C2orf82Q6UX34 121 aa9.26□□□□□ -0.93
NEK4-206ENST00000496822 KRTAP11-1Q8IUC1 163 aa9.26□□□□□ -0.93
NEK4-206ENST00000496822 LINC00469Q8N7U9 141 aa9.26□□□□□ -0.93
NEK4-206ENST00000496822 TLX1NBP0CAT3 122 aa9.25□□□□□ -0.93
NEK4-206ENST00000496822 LINC01561Q8N1V8 128 aa9.25□□□□□ -0.93
NEK4-206ENST00000496822 LRP2P98164 4655 aa9.25□□□□□ -0.93
NEK4-206ENST00000496822 IGLV5-45A0A087WSX0 123 aa9.24□□□□□ -0.93
NEK4-206ENST00000496822 GAGE2EQ4V326 116 aa9.24□□□□□ -0.93
NEK4-206ENST00000496822 C1orf137Q5JT78 98 aa9.24□□□□□ -0.93
NEK4-206ENST00000496822 LINC01545Q5VT33 79 aa9.24□□□□□ -0.93
NEK4-206ENST00000496822 FAM19A5Q7Z5A7 132 aaPredicted RBP9.24□□□□□ -0.93
NEK4-206ENST00000496822 KRTAP7-1Q8IUC3 87 aa9.24□□□□□ -0.93
NEK4-206ENST00000496822 GAGE2DQ9UEU5 116 aa9.24□□□□□ -0.93
NEK4-206ENST00000496822 C11orf86A6NJI1 115 aa9.23□□□□□ -0.93
NEK4-206ENST00000496822 IGKCP01834 107 aa9.23□□□□□ -0.93
NEK4-206ENST00000496822 TMEM170BQ5T4T1 132 aa9.23□□□□□ -0.93
NEK4-206ENST00000496822 HERVK_113P61574 105 aa9.22□□□□□ -0.93
NEK4-206ENST00000496822 CDKN2A-AS1Q9UH64 79 aa9.22□□□□□ -0.93
NEK4-206ENST00000496822 TRBV30A0A0K0K1B3 111 aa9.21□□□□□ -0.94
NEK4-206ENST00000496822 ZNF22P17026 224 aaPredicted RBP9.21□□□□□ -0.94
NEK4-206ENST00000496822 PMCHL2Q9BQD1 86 aa9.21□□□□□ -0.94
NEK4-206ENST00000496822 C9orf129Q5T035 196 aaKnown RBP9.2□□□□□ -0.94
NEK4-206ENST00000496822 NDUFC2-KCTD14E9PQ53 114 aa9.19□□□□□ -0.94
NEK4-206ENST00000496822 M0QXV9 152 aa9.19□□□□□ -0.94
NEK4-206ENST00000496822 SCGB1D1O95968 90 aa9.19□□□□□ -0.94
NEK4-206ENST00000496822 IGLV7-43P04211 117 aa9.19□□□□□ -0.94
NEK4-206ENST00000496822 PRSS2P07478 247 aa9.19□□□□□ -0.94
NEK4-206ENST00000496822 TOMM7Q9P0U1 55 aa9.19□□□□□ -0.94
NEK4-206ENST00000496822 SPINK8P0C7L1 97 aa9.17□□□□□ -0.94
NEK4-206ENST00000496822 TMEM223A0PJW6 202 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms