RNA–Protein interactions for RNA: ENST00000496728.1

TSC22D4-206, Transcript of TSC22 domain family member 4, humanhuman

TSL 3

Gene TSC22D4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-206ENST00000496728 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.88□□□□□ -0.35
TSC22D4-206ENST00000496728 C10orf25Q5T742 122 aa12.88□□□□□ -0.35
TSC22D4-206ENST00000496728 HIST1H2BHQ93079 126 aa12.88□□□□□ -0.35
TSC22D4-206ENST00000496728 HIST1H2BNQ99877 126 aa12.88□□□□□ -0.35
TSC22D4-206ENST00000496728 HIST1H2BMQ99879 126 aa12.88□□□□□ -0.35
TSC22D4-206ENST00000496728 CHTOPQ9Y3Y2 248 aaKnown RBP12.88□□□□□ -0.35
TSC22D4-206ENST00000496728 A0A096LNI7 61 aa12.87□□□□□ -0.35
TSC22D4-206ENST00000496728 TRAV12-1A0A0B4J245 112 aa12.87□□□□□ -0.35
TSC22D4-206ENST00000496728 C2orf82Q6UX34 121 aa12.87□□□□□ -0.35
TSC22D4-206ENST00000496728 A0A087WYN8 130 aa12.86□□□□□ -0.35
TSC22D4-206ENST00000496728 GAGE2BQ13066 116 aa12.86□□□□□ -0.35
TSC22D4-206ENST00000496728 HSPB8Q9UJY1 196 aa12.86□□□□□ -0.35
TSC22D4-206ENST00000496728 TRBV30A0A0K0K1B3 111 aa12.85□□□□□ -0.35
TSC22D4-206ENST00000496728 SPINK8P0C7L1 97 aa12.85□□□□□ -0.35
TSC22D4-206ENST00000496728 Q5VSD8 79 aa12.85□□□□□ -0.35
TSC22D4-206ENST00000496728 LINC00528Q8N1L1 170 aa12.85□□□□□ -0.35
TSC22D4-206ENST00000496728 KRTAP4-5Q9BYR2 181 aa12.85□□□□□ -0.35
TSC22D4-206ENST00000496728 C6orf48Q9UBA6 75 aa12.85□□□□□ -0.35
TSC22D4-206ENST00000496728 FABP4P15090 132 aa12.84□□□□□ -0.35
TSC22D4-206ENST00000496728 ZNF22P17026 224 aaPredicted RBP12.84□□□□□ -0.35
TSC22D4-206ENST00000496728 PTTG1IPP53801 180 aa12.84□□□□□ -0.35
TSC22D4-206ENST00000496728 RPL18AQ02543 176 aaKnown RBP12.84□□□□□ -0.35
TSC22D4-206ENST00000496728 C11orf86A6NJI1 115 aa12.83□□□□□ -0.36
TSC22D4-206ENST00000496728 CXCL5P42830 114 aa12.83□□□□□ -0.36
TSC22D4-206ENST00000496728 TMEM170BQ5T4T1 132 aa12.83□□□□□ -0.36
TSC22D4-206ENST00000496728 STPG4Q8N801 248 aa12.83□□□□□ -0.36
TSC22D4-206ENST00000496728 COX7B2Q8TF08 81 aa12.83□□□□□ -0.36
TSC22D4-206ENST00000496728 PLAC8Q9NZF1 115 aa12.82□□□□□ -0.36
TSC22D4-206ENST00000496728 F8VRH5 84 aa12.81□□□□□ -0.36
TSC22D4-206ENST00000496728 H0Y8G0 127 aa12.81□□□□□ -0.36
TSC22D4-206ENST00000496728 TLX1NBP0CAT3 122 aa12.81□□□□□ -0.36
TSC22D4-206ENST00000496728 DNAH8Q96JB1 4490 aa12.8□□□□□ -0.36
TSC22D4-206ENST00000496728 PLA2G1BP04054 148 aaKnown RBP12.8□□□□□ -0.36
TSC22D4-206ENST00000496728 IGLV5-39A0A0G2JS06 123 aa12.78□□□□□ -0.36
TSC22D4-206ENST00000496728 NDUFC2-KCTD14E9PQ53 114 aa12.77□□□□□ -0.37
TSC22D4-206ENST00000496728 ODF1Q14990 250 aa12.77□□□□□ -0.37
TSC22D4-206ENST00000496728 C9orf116Q5BN46 136 aaPredicted RBP12.77□□□□□ -0.37
TSC22D4-206ENST00000496728 Q6ZRP5 223 aa12.77□□□□□ -0.37
TSC22D4-206ENST00000496728 GAGE2EQ4V326 116 aa12.76□□□□□ -0.37
TSC22D4-206ENST00000496728 MAP1LC3CQ9BXW4 147 aa12.76□□□□□ -0.37
TSC22D4-206ENST00000496728 GAGE2DQ9UEU5 116 aa12.76□□□□□ -0.37
TSC22D4-206ENST00000496728 COA6Q5JTJ3 125 aaKnown RBP12.75□□□□□ -0.37
TSC22D4-206ENST00000496728 C7orf33Q8WU49 177 aa12.74□□□□□ -0.37
TSC22D4-206ENST00000496728 TMEM223A0PJW6 202 aa12.73□□□□□ -0.37
TSC22D4-206ENST00000496728 PLNP26678 52 aa12.73□□□□□ -0.37
TSC22D4-206ENST00000496728 RPL37AP61513 92 aaKnown RBP12.73□□□□□ -0.37
TSC22D4-206ENST00000496728 A0A1W2PNN7 141 aa12.71□□□□□ -0.37
TSC22D4-206ENST00000496728 DPM2O94777 84 aa12.7□□□□□ -0.38
TSC22D4-206ENST00000496728 INAFM2P0DMQ5 153 aa12.7□□□□□ -0.38
TSC22D4-206ENST00000496728 SFTA2Q6UW10 78 aa12.7□□□□□ -0.38
TSC22D4-206ENST00000496728 PMCHL2Q9BQD1 86 aa12.69□□□□□ -0.38
TSC22D4-206ENST00000496728 SYS1-DBNDD2H3BUS1 97 aa12.67□□□□□ -0.38
TSC22D4-206ENST00000496728 IGKCP01834 107 aa12.67□□□□□ -0.38
TSC22D4-206ENST00000496728 FAT1Q14517 4588 aa12.66□□□□□ -0.38
TSC22D4-206ENST00000496728 FAM168BA1KXE4 195 aa12.65□□□□□ -0.38
TSC22D4-206ENST00000496728 C9orf129Q5T035 196 aaKnown RBP12.65□□□□□ -0.38
TSC22D4-206ENST00000496728 FAM19A5Q7Z5A7 132 aaPredicted RBP12.65□□□□□ -0.38
TSC22D4-206ENST00000496728 XAGE1AQ9HD64 81 aa12.65□□□□□ -0.38
TSC22D4-206ENST00000496728 KRTAP10-4P60372 401 aaPredicted RBP12.64□□□□□ -0.39
TSC22D4-206ENST00000496728 HERVK_113P61574 105 aa12.64□□□□□ -0.39
TSC22D4-206ENST00000496728 PET117Q6UWS5 81 aa12.64□□□□□ -0.39
TSC22D4-206ENST00000496728 ZNF625Q96I27 306 aaPredicted RBP12.64□□□□□ -0.39
TSC22D4-206ENST00000496728 PFN2P35080 140 aa12.63□□□□□ -0.39
TSC22D4-206ENST00000496728 ERG28Q9UKR5 140 aa12.63□□□□□ -0.39
TSC22D4-206ENST00000496728 PHF5AQ7RTV0 110 aaKnown RBP12.62□□□□□ -0.39
TSC22D4-206ENST00000496728 PLEKHB2Q96CS7 222 aa12.62□□□□□ -0.39
TSC22D4-206ENST00000496728 LEPROTO15243 131 aa12.61□□□□□ -0.39
TSC22D4-206ENST00000496728 C3orf79P0CE67 100 aa12.61□□□□□ -0.39
TSC22D4-206ENST00000496728 KRTDAPP60985 99 aa12.61□□□□□ -0.39
TSC22D4-206ENST00000496728 COX17Q14061 63 aa12.61□□□□□ -0.39
TSC22D4-206ENST00000496728 LINC01545Q5VT33 79 aa12.61□□□□□ -0.39
TSC22D4-206ENST00000496728 M0QXV9 152 aa12.59□□□□□ -0.39
TSC22D4-206ENST00000496728 S100A6P06703 90 aa12.59□□□□□ -0.39
TSC22D4-206ENST00000496728 HERV-K104P63124 156 aa12.59□□□□□ -0.39
TSC22D4-206ENST00000496728 NDUFA12Q9UI09 145 aa12.59□□□□□ -0.39
TSC22D4-206ENST00000496728 SRRM2Q9UQ35 2752 aaKnown RBP12.58□□□□□ -0.39
TSC22D4-206ENST00000496728 MYMXA0A1B0GTQ4 84 aa12.58□□□□□ -0.4
TSC22D4-206ENST00000496728 KRTAP7-1Q8IUC3 87 aa12.58□□□□□ -0.4
TSC22D4-206ENST00000496728 PCLOQ9Y6V0 5065 aa12.58□□□□□ -0.4
TSC22D4-206ENST00000496728 S100A2P29034 98 aa12.57□□□□□ -0.4
TSC22D4-206ENST00000496728 LINC00158P58513 81 aa12.57□□□□□ -0.4
TSC22D4-206ENST00000496728 PRR3P79522 188 aaKnown RBP12.57□□□□□ -0.4
TSC22D4-206ENST00000496728 VPS13BQ7Z7G8 4022 aa12.57□□□□□ -0.4
TSC22D4-206ENST00000496728 ABCA13Q86UQ4 5058 aa12.56□□□□□ -0.4
TSC22D4-206ENST00000496728 C20orf202A1L168 122 aa12.56□□□□□ -0.4
TSC22D4-206ENST00000496728 J3QQQ9 107 aa12.56□□□□□ -0.4
TSC22D4-206ENST00000496728 SERTAD4-AS1Q5TG53 156 aa12.56□□□□□ -0.4
TSC22D4-206ENST00000496728 LINC00587B1AMM8 73 aa12.55□□□□□ -0.4
TSC22D4-206ENST00000496728 LGALS3P17931 250 aaKnown RBP12.55□□□□□ -0.4
TSC22D4-206ENST00000496728 MEIG1Q5JSS6 88 aa12.55□□□□□ -0.4
TSC22D4-206ENST00000496728 HIST3H2BBQ8N257 126 aa12.55□□□□□ -0.4
TSC22D4-206ENST00000496728 C22orf24Q9Y442 160 aa12.55□□□□□ -0.4
TSC22D4-206ENST00000496728 TSPEAR-AS2P59090 65 aa12.54□□□□□ -0.4
TSC22D4-206ENST00000496728 UBE2BP63146 152 aa12.54□□□□□ -0.4
TSC22D4-206ENST00000496728 LBHQ53QV2 105 aaPredicted RBP12.54□□□□□ -0.4
TSC22D4-206ENST00000496728 SND1-IT1Q9HBX3 110 aa12.54□□□□□ -0.4
TSC22D4-206ENST00000496728 PLA2G2DQ9UNK4 145 aa12.54□□□□□ -0.4
TSC22D4-206ENST00000496728 E9PLD3 99 aa12.53□□□□□ -0.4
TSC22D4-206ENST00000496728 NMUP48645 174 aa12.53□□□□□ -0.4
TSC22D4-206ENST00000496728 A0A0U1RRA0 63 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms