RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 LINC00526Q96FQ7 95 aa8□□□□□ -1.13
CDCA7-208ENST00000496441 FAM218AQ96MZ4 157 aa8□□□□□ -1.13
CDCA7-208ENST00000496441 COL6A5A8TX70 2615 aa7.99□□□□□ -1.13
CDCA7-208ENST00000496441 CRPP02741 224 aa7.99□□□□□ -1.13
CDCA7-208ENST00000496441 TRAV8-4A0A0B4J246 113 aa7.99□□□□□ -1.13
CDCA7-208ENST00000496441 PRR3P79522 188 aaKnown RBP7.99□□□□□ -1.13
CDCA7-208ENST00000496441 SS18Q15532 418 aa7.99□□□□□ -1.13
CDCA7-208ENST00000496441 A0A087WZ39 114 aa7.99□□□□□ -1.13
CDCA7-208ENST00000496441 ATP5G1P05496 136 aa7.99□□□□□ -1.13
CDCA7-208ENST00000496441 CCL18P55774 89 aa7.99□□□□□ -1.13
CDCA7-208ENST00000496441 C9orf116Q5BN46 136 aaPredicted RBP7.99□□□□□ -1.13
CDCA7-208ENST00000496441 NBEAL1Q6ZS30 2694 aa7.98□□□□□ -1.13
CDCA7-208ENST00000496441 IGKV2-28A0A075B6P5 120 aa7.98□□□□□ -1.13
CDCA7-208ENST00000496441 COX7A2LO14548 114 aa7.98□□□□□ -1.13
CDCA7-208ENST00000496441 IGKV2D-28P01615 120 aa7.98□□□□□ -1.13
CDCA7-208ENST00000496441 OXLD1Q5BKU9 147 aa7.98□□□□□ -1.13
CDCA7-208ENST00000496441 TTC32Q5I0X7 151 aa7.97□□□□□ -1.13
CDCA7-208ENST00000496441 CKS1BP61024 79 aa7.97□□□□□ -1.13
CDCA7-208ENST00000496441 COPS9Q8WXC6 57 aa7.97□□□□□ -1.13
CDCA7-208ENST00000496441 RETNQ9HD89 108 aa7.96□□□□□ -1.13
CDCA7-208ENST00000496441 IGHV4-30-4P0DP06 118 aa7.96□□□□□ -1.14
CDCA7-208ENST00000496441 MALP21145 153 aa7.96□□□□□ -1.14
CDCA7-208ENST00000496441 APOC4P55056 127 aa7.96□□□□□ -1.14
CDCA7-208ENST00000496441 RNF183Q96D59 192 aa7.96□□□□□ -1.14
CDCA7-208ENST00000496441 SHISA2Q6UWI4 295 aa7.96□□□□□ -1.14
CDCA7-208ENST00000496441 ANK2Q01484 3957 aa7.95□□□□□ -1.14
CDCA7-208ENST00000496441 SNCGO76070 127 aa7.95□□□□□ -1.14
CDCA7-208ENST00000496441 SMIM11BQ8TCY0 68 aa7.95□□□□□ -1.14
CDCA7-208ENST00000496441 SMIM9A6NGZ8 99 aa7.95□□□□□ -1.14
CDCA7-208ENST00000496441 BAALC-AS2P0C853 105 aa7.95□□□□□ -1.14
CDCA7-208ENST00000496441 REG3AQ06141 175 aa7.95□□□□□ -1.14
CDCA7-208ENST00000496441 LINC00612Q8N6U2 182 aa7.95□□□□□ -1.14
CDCA7-208ENST00000496441 CHCHD10Q8WYQ3 142 aaPredicted RBP7.95□□□□□ -1.14
CDCA7-208ENST00000496441 H3BT86 120 aa7.94□□□□□ -1.14
CDCA7-208ENST00000496441 A0A087WYN8 130 aa7.94□□□□□ -1.14
CDCA7-208ENST00000496441 SLPIP03973 132 aa7.94□□□□□ -1.14
CDCA7-208ENST00000496441 C15orf53Q8NAA6 179 aa7.94□□□□□ -1.14
CDCA7-208ENST00000496441 TRAV13-2A0A0B4J235 113 aa7.93□□□□□ -1.14
CDCA7-208ENST00000496441 LYRM9A8MSI8 78 aa7.93□□□□□ -1.14
CDCA7-208ENST00000496441 KLK12Q9UKR0 248 aa7.93□□□□□ -1.14
CDCA7-208ENST00000496441 C6orf223Q8N319 242 aa7.93□□□□□ -1.14
CDCA7-208ENST00000496441 Q8NAQ8 132 aa7.92□□□□□ -1.14
CDCA7-208ENST00000496441 CITED1Q99966 193 aa7.92□□□□□ -1.14
CDCA7-208ENST00000496441 IBA57-AS1B1ANH7 110 aa7.92□□□□□ -1.14
CDCA7-208ENST00000496441 CFAP161Q6P656 301 aa7.92□□□□□ -1.14
CDCA7-208ENST00000496441 A0A1B0GUV1 79 aa7.92□□□□□ -1.14
CDCA7-208ENST00000496441 DNAL4O96015 105 aa7.92□□□□□ -1.14
CDCA7-208ENST00000496441 SCGB1A1P11684 91 aa7.92□□□□□ -1.14
CDCA7-208ENST00000496441 SPART-AS1P0CW21 52 aa7.91□□□□□ -1.14
CDCA7-208ENST00000496441 LECT2O14960 151 aa7.91□□□□□ -1.14
CDCA7-208ENST00000496441 GAGE2BQ13066 116 aa7.9□□□□□ -1.14
CDCA7-208ENST00000496441 GAGE2EQ4V326 116 aa7.9□□□□□ -1.14
CDCA7-208ENST00000496441 GAGE2DQ9UEU5 116 aa7.9□□□□□ -1.14
CDCA7-208ENST00000496441 M0QXV9 152 aa7.9□□□□□ -1.15
CDCA7-208ENST00000496441 C9orf129Q5T035 196 aaKnown RBP7.89□□□□□ -1.15
CDCA7-208ENST00000496441 NCR3O14931 201 aa7.89□□□□□ -1.15
CDCA7-208ENST00000496441 RPL28P46779 137 aaKnown RBP7.89□□□□□ -1.15
CDCA7-208ENST00000496441 C10orf25Q5T742 122 aa7.89□□□□□ -1.15
CDCA7-208ENST00000496441 GAGE2AQ6NT46 116 aa7.89□□□□□ -1.15
CDCA7-208ENST00000496441 CD164L2Q6UWJ8 174 aa7.89□□□□□ -1.15
CDCA7-208ENST00000496441 ANAPC13Q9BS18 74 aa7.89□□□□□ -1.15
CDCA7-208ENST00000496441 MIFP14174 115 aa7.88□□□□□ -1.15
CDCA7-208ENST00000496441 MRPL23Q16540 153 aaKnown RBP7.88□□□□□ -1.15
CDCA7-208ENST00000496441 UNQ6190/PRO20217Q6UXQ8 127 aa7.88□□□□□ -1.15
CDCA7-208ENST00000496441 Q8IZM0 81 aa7.88□□□□□ -1.15
CDCA7-208ENST00000496441 TRACP01848 142 aa7.86□□□□□ -1.15
CDCA7-208ENST00000496441 PRB2P02812 416 aaPredicted RBP7.86□□□□□ -1.15
CDCA7-208ENST00000496441 C14orf132Q9NPU4 83 aa7.86□□□□□ -1.15
CDCA7-208ENST00000496441 MGAM2Q2M2H8 2515 aa7.86□□□□□ -1.15
CDCA7-208ENST00000496441 KIAA0087Q14695 138 aa7.86□□□□□ -1.15
CDCA7-208ENST00000496441 KRTAP10-11P60412 298 aa7.85□□□□□ -1.15
CDCA7-208ENST00000496441 C22orf24Q9Y442 160 aa7.85□□□□□ -1.15
CDCA7-208ENST00000496441 BAHCC1Q9P281 2608 aa7.85□□□□□ -1.15
CDCA7-208ENST00000496441 SPAG11BQ08648 103 aa7.85□□□□□ -1.15
CDCA7-208ENST00000496441 Q8NDZ9 215 aa7.85□□□□□ -1.15
CDCA7-208ENST00000496441 Q6ZTC4 211 aa7.85□□□□□ -1.15
CDCA7-208ENST00000496441 WFDC10BQ8IUB3 73 aa7.85□□□□□ -1.15
CDCA7-208ENST00000496441 HIGD2BQ4VC39 106 aa7.84□□□□□ -1.15
CDCA7-208ENST00000496441 XAGE1AQ9HD64 81 aa7.84□□□□□ -1.15
CDCA7-208ENST00000496441 CYSRT1A8MQ03 144 aa7.84□□□□□ -1.15
CDCA7-208ENST00000496441 LYPD5Q6UWN5 251 aa7.83□□□□□ -1.16
CDCA7-208ENST00000496441 SMCR5Q8TEV8 140 aa7.83□□□□□ -1.16
CDCA7-208ENST00000496441 S100A7L2Q5SY68 101 aa7.82□□□□□ -1.16
CDCA7-208ENST00000496441 LELP1Q5T871 98 aa7.82□□□□□ -1.16
CDCA7-208ENST00000496441 ENHOQ6UWT2 76 aa7.82□□□□□ -1.16
CDCA7-208ENST00000496441 WFDC9Q8NEX5 89 aa7.82□□□□□ -1.16
CDCA7-208ENST00000496441 C3orf56Q8N813 242 aa7.82□□□□□ -1.16
CDCA7-208ENST00000496441 LINC01600Q96MT4 127 aa7.82□□□□□ -1.16
CDCA7-208ENST00000496441 KPRPQ5T749 579 aaPredicted RBP7.82□□□□□ -1.16
CDCA7-208ENST00000496441 NDUFV3P56181 108 aaKnown RBP7.81□□□□□ -1.16
CDCA7-208ENST00000496441 RPL18AQ02543 176 aaKnown RBP7.81□□□□□ -1.16
CDCA7-208ENST00000496441 NANOS2P60321 138 aaKnown RBP7.81□□□□□ -1.16
CDCA7-208ENST00000496441 C6orf99Q4VX62 202 aa7.81□□□□□ -1.16
CDCA7-208ENST00000496441 H0YGX0 51 aa7.8□□□□□ -1.16
CDCA7-208ENST00000496441 KRTAP24-1Q3LI83 254 aa7.8□□□□□ -1.16
CDCA7-208ENST00000496441 DEFB121Q5J5C9 76 aa7.79□□□□□ -1.16
CDCA7-208ENST00000496441 A0A0J9YWU9 116 aa7.79□□□□□ -1.16
CDCA7-208ENST00000496441 NHLRC4P0CG21 123 aaPredicted RBP7.79□□□□□ -1.16
CDCA7-208ENST00000496441 MRAPQ8TCY5 172 aa7.78□□□□□ -1.16
CDCA7-208ENST00000496441 TMEM126AQ9H061 195 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms