RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 DEFB4AO15263 64 aa4.83□□□□□ -1.64
USP39-219ENST00000496047 TSPAN13O95857 204 aa4.83□□□□□ -1.64
USP39-219ENST00000496047 SCGB1C2P0DMR2 95 aa4.83□□□□□ -1.64
USP39-219ENST00000496047 CXCL5P42830 114 aa4.83□□□□□ -1.64
USP39-219ENST00000496047 RBX1P62877 108 aa4.83□□□□□ -1.64
USP39-219ENST00000496047 LELP1Q5T871 98 aa4.83□□□□□ -1.64
USP39-219ENST00000496047 PPDPFQ9H3Y8 114 aa4.83□□□□□ -1.64
USP39-219ENST00000496047 TOMM7Q9P0U1 55 aa4.83□□□□□ -1.64
USP39-219ENST00000496047 KMT2CQ8NEZ4 4911 aaKnown RBP4.83□□□□□ -1.64
USP39-219ENST00000496047 IGLV4-60A0A075B6I1 120 aa4.82□□□□□ -1.64
USP39-219ENST00000496047 A0A087WZ39 114 aa4.82□□□□□ -1.64
USP39-219ENST00000496047 A0A096LPF7 62 aa4.82□□□□□ -1.64
USP39-219ENST00000496047 LINC00959A0A1B0GUT2 108 aa4.82□□□□□ -1.64
USP39-219ENST00000496047 F8W1H4 67 aa4.82□□□□□ -1.64
USP39-219ENST00000496047 CRPP02741 224 aa4.82□□□□□ -1.64
USP39-219ENST00000496047 ANGP03950 147 aaKnown RBP4.82□□□□□ -1.64
USP39-219ENST00000496047 CFC1BP0CG36 223 aa4.82□□□□□ -1.64
USP39-219ENST00000496047 CFC1P0CG37 223 aa4.82□□□□□ -1.64
USP39-219ENST00000496047 MALP21145 153 aa4.82□□□□□ -1.64
USP39-219ENST00000496047 COX6A2Q02221 97 aa4.82□□□□□ -1.64
USP39-219ENST00000496047 RNF151Q2KHN1 245 aa4.82□□□□□ -1.64
USP39-219ENST00000496047 CFAP161Q6P656 301 aa4.82□□□□□ -1.64
USP39-219ENST00000496047 CELA1Q9UNI1 258 aa4.82□□□□□ -1.64
USP39-219ENST00000496047 RYR3Q15413 4870 aa4.82□□□□□ -1.64
USP39-219ENST00000496047 B5MCH6 92 aa4.81□□□□□ -1.64
USP39-219ENST00000496047 KRTAP9-3Q9BYQ3 159 aa4.81□□□□□ -1.64
USP39-219ENST00000496047 COX7A2LO14548 114 aa4.8□□□□□ -1.64
USP39-219ENST00000496047 CKS1BP61024 79 aa4.8□□□□□ -1.64
USP39-219ENST00000496047 REG3AQ06141 175 aa4.8□□□□□ -1.64
USP39-219ENST00000496047 ATXN8Q156A1 80 aa4.8□□□□□ -1.64
USP39-219ENST00000496047 C6orf226Q5I0X4 101 aa4.8□□□□□ -1.64
USP39-219ENST00000496047 Q8IZM0 81 aa4.8□□□□□ -1.64
USP39-219ENST00000496047 TRAV13-2A0A0B4J235 113 aa4.79□□□□□ -1.64
USP39-219ENST00000496047 IGHV3OR16-9A0A0B4J2B5 98 aa4.79□□□□□ -1.64
USP39-219ENST00000496047 IBA57-AS1B1ANH7 110 aa4.79□□□□□ -1.64
USP39-219ENST00000496047 H7C2G1 150 aa4.79□□□□□ -1.64
USP39-219ENST00000496047 IGHV3-33P01772 117 aa4.79□□□□□ -1.64
USP39-219ENST00000496047 XCL1P47992 114 aa4.79□□□□□ -1.64
USP39-219ENST00000496047 LINC00158P58513 81 aa4.79□□□□□ -1.64
USP39-219ENST00000496047 KRTAP10-11P60412 298 aa4.79□□□□□ -1.64
USP39-219ENST00000496047 NPC2P61916 151 aa4.79□□□□□ -1.64
USP39-219ENST00000496047 CD164L2Q6UWJ8 174 aa4.79□□□□□ -1.64
USP39-219ENST00000496047 C5orf38Q86SI9 138 aa4.79□□□□□ -1.64
USP39-219ENST00000496047 C11orf45Q8TAV5 145 aa4.79□□□□□ -1.64
USP39-219ENST00000496047 MUC7Q8TAX7 377 aa4.79□□□□□ -1.64
USP39-219ENST00000496047 LINC00308Q8TCZ7 52 aa4.79□□□□□ -1.64
USP39-219ENST00000496047 ZNF625Q96I27 306 aaPredicted RBP4.79□□□□□ -1.64
USP39-219ENST00000496047 LITAFQ99732 161 aa4.79□□□□□ -1.64
USP39-219ENST00000496047 TRAV8-4A0A0B4J246 113 aa4.78□□□□□ -1.64
USP39-219ENST00000496047 TRBV30A0A0K0K1B3 111 aa4.78□□□□□ -1.64
USP39-219ENST00000496047 G3V4G9 280 aa4.78□□□□□ -1.64
USP39-219ENST00000496047 H3BMG7 143 aa4.78□□□□□ -1.64
USP39-219ENST00000496047 RPL13AP40429 203 aaKnown RBP4.78□□□□□ -1.64
USP39-219ENST00000496047 OCIAD2Q56VL3 154 aa4.78□□□□□ -1.64
USP39-219ENST00000496047 KPRPQ5T749 579 aaPredicted RBP4.78□□□□□ -1.64
USP39-219ENST00000496047 CLPSL2Q6UWE3 100 aa4.78□□□□□ -1.64
USP39-219ENST00000496047 LINC00269Q8N2A0 174 aa4.78□□□□□ -1.64
USP39-219ENST00000496047 C15orf53Q8NAA6 179 aa4.78□□□□□ -1.64
USP39-219ENST00000496047 RETNQ9HD89 108 aa4.78□□□□□ -1.64
USP39-219ENST00000496047 CBY1Q9Y3M2 126 aa4.78□□□□□ -1.64
USP39-219ENST00000496047 BIRC6Q9NR09 4857 aa4.78□□□□□ -1.64
USP39-219ENST00000496047 TRAV10A0A0B4J240 114 aa4.77□□□□□ -1.65
USP39-219ENST00000496047 A0A0U1RRA0 63 aa4.77□□□□□ -1.65
USP39-219ENST00000496047 COX17Q14061 63 aa4.77□□□□□ -1.65
USP39-219ENST00000496047 KRTAP5-3Q6L8H2 238 aa4.77□□□□□ -1.65
USP39-219ENST00000496047 CHCHD10Q8WYQ3 142 aaPredicted RBP4.77□□□□□ -1.65
USP39-219ENST00000496047 DEFB131BA0A096LNP1 70 aa4.76□□□□□ -1.65
USP39-219ENST00000496047 A0A0J9YWU9 116 aa4.76□□□□□ -1.65
USP39-219ENST00000496047 ADAMTSL4-AS1Q5T5F5 129 aa4.76□□□□□ -1.65
USP39-219ENST00000496047 LYPD5Q6UWN5 251 aa4.76□□□□□ -1.65
USP39-219ENST00000496047 Q6ZTC4 211 aa4.76□□□□□ -1.65
USP39-219ENST00000496047 MIR7-3HGQ8N6C7 128 aa4.76□□□□□ -1.65
USP39-219ENST00000496047 VPS25Q9BRG1 176 aa4.76□□□□□ -1.65
USP39-219ENST00000496047 TCL1BO95988 128 aa4.75□□□□□ -1.65
USP39-219ENST00000496047 SPAG11BQ08648 103 aa4.75□□□□□ -1.65
USP39-219ENST00000496047 DEFB121Q5J5C9 76 aa4.75□□□□□ -1.65
USP39-219ENST00000496047 DAND5Q8N907 189 aa4.75□□□□□ -1.65
USP39-219ENST00000496047 SND1-IT1Q9HBX3 110 aa4.75□□□□□ -1.65
USP39-219ENST00000496047 KLK12Q9UKR0 248 aa4.75□□□□□ -1.65
USP39-219ENST00000496047 IGLV10-54A0A075B6I4 117 aa4.74□□□□□ -1.65
USP39-219ENST00000496047 GAGE12HA6NDE8 117 aa4.74□□□□□ -1.65
USP39-219ENST00000496047 M0QXV9 152 aa4.74□□□□□ -1.65
USP39-219ENST00000496047 TRIAP1O43715 76 aa4.74□□□□□ -1.65
USP39-219ENST00000496047 SNCGO76070 127 aa4.74□□□□□ -1.65
USP39-219ENST00000496047 PFN2P35080 140 aa4.74□□□□□ -1.65
USP39-219ENST00000496047 UBE2WQ96B02 151 aa4.74□□□□□ -1.65
USP39-219ENST00000496047 FAM30AQ9NZY2 134 aa4.74□□□□□ -1.65
USP39-219ENST00000496047 KLK5Q9Y337 293 aaPredicted RBP4.74□□□□□ -1.65
USP39-219ENST00000496047 C9JAW5 83 aa4.73□□□□□ -1.65
USP39-219ENST00000496047 H3BT86 120 aa4.73□□□□□ -1.65
USP39-219ENST00000496047 SLC25A20O43772 301 aa4.73□□□□□ -1.65
USP39-219ENST00000496047 NANOS2P60321 138 aaKnown RBP4.73□□□□□ -1.65
USP39-219ENST00000496047 LINC01620Q4KN68 170 aa4.73□□□□□ -1.65
USP39-219ENST00000496047 RMI2Q96E14 147 aa4.73□□□□□ -1.65
USP39-219ENST00000496047 TM2D3Q9BRN9 247 aa4.73□□□□□ -1.65
USP39-219ENST00000496047 C1orf43Q9BWL3 253 aa4.73□□□□□ -1.65
USP39-219ENST00000496047 PRR34Q9NV39 138 aa4.73□□□□□ -1.65
USP39-219ENST00000496047 TRBV10-2A0A0K0K1G8 114 aa4.72□□□□□ -1.65
USP39-219ENST00000496047 F8WDY8 70 aa4.72□□□□□ -1.65
USP39-219ENST00000496047 DNAL4O96015 105 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms