RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 UNQ6190/PRO20217Q6UXQ8 127 aa12.79□□□□□ -0.36
LMO4-204ENST00000495705 A0A096LNI7 61 aa12.78□□□□□ -0.36
LMO4-204ENST00000495705 IGKV2-24A0A0C4DH68 120 aa12.78□□□□□ -0.36
LMO4-204ENST00000495705 TRBV30A0A0K0K1B3 111 aa12.78□□□□□ -0.36
LMO4-204ENST00000495705 SPINK8P0C7L1 97 aa12.78□□□□□ -0.36
LMO4-204ENST00000495705 CXCL5P42830 114 aa12.78□□□□□ -0.36
LMO4-204ENST00000495705 CKS1BP61024 79 aa12.78□□□□□ -0.36
LMO4-204ENST00000495705 C11orf86A6NJI1 115 aa12.77□□□□□ -0.37
LMO4-204ENST00000495705 F8VRH5 84 aa12.77□□□□□ -0.37
LMO4-204ENST00000495705 SMR3BP02814 79 aaPredicted RBP12.77□□□□□ -0.37
LMO4-204ENST00000495705 C10orf25Q5T742 122 aa12.77□□□□□ -0.37
LMO4-204ENST00000495705 C2orf82Q6UX34 121 aa12.77□□□□□ -0.37
LMO4-204ENST00000495705 DPH3Q96FX2 82 aa12.77□□□□□ -0.37
LMO4-204ENST00000495705 C6orf48Q9UBA6 75 aa12.77□□□□□ -0.37
LMO4-204ENST00000495705 FABP4P15090 132 aa12.76□□□□□ -0.37
LMO4-204ENST00000495705 COX7B2Q8TF08 81 aa12.76□□□□□ -0.37
LMO4-204ENST00000495705 PTTG1IPP53801 180 aa12.75□□□□□ -0.37
LMO4-204ENST00000495705 MAJINQ3KP22 176 aa12.75□□□□□ -0.37
LMO4-204ENST00000495705 COA6Q5JTJ3 125 aaKnown RBP12.75□□□□□ -0.37
LMO4-204ENST00000495705 TMEM170BQ5T4T1 132 aa12.75□□□□□ -0.37
LMO4-204ENST00000495705 A0A087WYN8 130 aa12.74□□□□□ -0.37
LMO4-204ENST00000495705 EPM2AB3EWF7 344 aa12.74□□□□□ -0.37
LMO4-204ENST00000495705 FAM229AH3BQW9 127 aa12.74□□□□□ -0.37
LMO4-204ENST00000495705 TLX1NBP0CAT3 122 aa12.74□□□□□ -0.37
LMO4-204ENST00000495705 RPL18AQ02543 176 aaKnown RBP12.74□□□□□ -0.37
LMO4-204ENST00000495705 KRTAP17-1Q9BYP8 105 aa12.74□□□□□ -0.37
LMO4-204ENST00000495705 IGLV5-39A0A0G2JS06 123 aa12.73□□□□□ -0.37
LMO4-204ENST00000495705 H0Y8G0 127 aa12.73□□□□□ -0.37
LMO4-204ENST00000495705 GAGE2BQ13066 116 aa12.73□□□□□ -0.37
LMO4-204ENST00000495705 ODF1Q14990 250 aa12.73□□□□□ -0.37
LMO4-204ENST00000495705 PLAC8Q9NZF1 115 aa12.73□□□□□ -0.37
LMO4-204ENST00000495705 Q5VSD8 79 aa12.72□□□□□ -0.37
LMO4-204ENST00000495705 LINC00528Q8N1L1 170 aa12.71□□□□□ -0.37
LMO4-204ENST00000495705 STPG4Q8N801 248 aa12.71□□□□□ -0.37
LMO4-204ENST00000495705 MAP1LC3CQ9BXW4 147 aa12.71□□□□□ -0.37
LMO4-204ENST00000495705 NDUFC2-KCTD14E9PQ53 114 aa12.69□□□□□ -0.38
LMO4-204ENST00000495705 FAT1Q14517 4588 aa12.68□□□□□ -0.38
LMO4-204ENST00000495705 PLNP26678 52 aa12.68□□□□□ -0.38
LMO4-204ENST00000495705 Q6ZRP5 223 aa12.68□□□□□ -0.38
LMO4-204ENST00000495705 TMEM223A0PJW6 202 aa12.67□□□□□ -0.38
LMO4-204ENST00000495705 C9orf116Q5BN46 136 aaPredicted RBP12.67□□□□□ -0.38
LMO4-204ENST00000495705 KRTAP4-5Q9BYR2 181 aa12.67□□□□□ -0.38
LMO4-204ENST00000495705 PLA2G1BP04054 148 aaKnown RBP12.66□□□□□ -0.38
LMO4-204ENST00000495705 SFTA2Q6UW10 78 aa12.66□□□□□ -0.38
LMO4-204ENST00000495705 DPM2O94777 84 aa12.65□□□□□ -0.38
LMO4-204ENST00000495705 SYS1-DBNDD2H3BUS1 97 aa12.64□□□□□ -0.39
LMO4-204ENST00000495705 GAGE2EQ4V326 116 aa12.64□□□□□ -0.39
LMO4-204ENST00000495705 GAGE2DQ9UEU5 116 aa12.64□□□□□ -0.39
LMO4-204ENST00000495705 IGKCP01834 107 aa12.62□□□□□ -0.39
LMO4-204ENST00000495705 C7orf33Q8WU49 177 aa12.62□□□□□ -0.39
LMO4-204ENST00000495705 PMCHL2Q9BQD1 86 aa12.62□□□□□ -0.39
LMO4-204ENST00000495705 PET117Q6UWS5 81 aa12.61□□□□□ -0.39
LMO4-204ENST00000495705 ABCA13Q86UQ4 5058 aa12.61□□□□□ -0.39
LMO4-204ENST00000495705 A0A1W2PNN7 141 aa12.6□□□□□ -0.39
LMO4-204ENST00000495705 VPS13BQ7Z7G8 4022 aa12.59□□□□□ -0.39
LMO4-204ENST00000495705 RPL37AP61513 92 aaKnown RBP12.59□□□□□ -0.39
LMO4-204ENST00000495705 HERVK_113P61574 105 aa12.59□□□□□ -0.39
LMO4-204ENST00000495705 SRRM2Q9UQ35 2752 aaKnown RBP12.58□□□□□ -0.39
LMO4-204ENST00000495705 ZNF625Q96I27 306 aaPredicted RBP12.58□□□□□ -0.4
LMO4-204ENST00000495705 S100A6P06703 90 aa12.57□□□□□ -0.4
LMO4-204ENST00000495705 C3orf79P0CE67 100 aa12.57□□□□□ -0.4
LMO4-204ENST00000495705 C9orf129Q5T035 196 aaKnown RBP12.57□□□□□ -0.4
LMO4-204ENST00000495705 LINC01545Q5VT33 79 aa12.57□□□□□ -0.4
LMO4-204ENST00000495705 ERG28Q9UKR5 140 aa12.57□□□□□ -0.4
LMO4-204ENST00000495705 COX17Q14061 63 aa12.56□□□□□ -0.4
LMO4-204ENST00000495705 PCLOQ9Y6V0 5065 aa12.55□□□□□ -0.4
LMO4-204ENST00000495705 LEPROTO15243 131 aa12.55□□□□□ -0.4
LMO4-204ENST00000495705 KRTDAPP60985 99 aa12.55□□□□□ -0.4
LMO4-204ENST00000495705 FAM19A5Q7Z5A7 132 aaPredicted RBP12.55□□□□□ -0.4
LMO4-204ENST00000495705 PLEKHB2Q96CS7 222 aa12.55□□□□□ -0.4
LMO4-204ENST00000495705 XAGE1AQ9HD64 81 aa12.55□□□□□ -0.4
LMO4-204ENST00000495705 FAM168BA1KXE4 195 aa12.54□□□□□ -0.4
LMO4-204ENST00000495705 KRTAP10-4P60372 401 aaPredicted RBP12.54□□□□□ -0.4
LMO4-204ENST00000495705 HIST3H2BBQ8N257 126 aa12.54□□□□□ -0.4
LMO4-204ENST00000495705 INAFM2P0DMQ5 153 aa12.53□□□□□ -0.4
LMO4-204ENST00000495705 S100A2P29034 98 aa12.53□□□□□ -0.4
LMO4-204ENST00000495705 PFN2P35080 140 aa12.53□□□□□ -0.4
LMO4-204ENST00000495705 HERV-K104P63124 156 aa12.53□□□□□ -0.4
LMO4-204ENST00000495705 NDUFA12Q9UI09 145 aa12.53□□□□□ -0.4
LMO4-204ENST00000495705 C20orf202A1L168 122 aa12.52□□□□□ -0.41
LMO4-204ENST00000495705 MYMXA0A1B0GTQ4 84 aa12.51□□□□□ -0.41
LMO4-204ENST00000495705 J3QQQ9 107 aa12.5□□□□□ -0.41
LMO4-204ENST00000495705 M0QXV9 152 aa12.5□□□□□ -0.41
LMO4-204ENST00000495705 TSPEAR-AS2P59090 65 aa12.5□□□□□ -0.41
LMO4-204ENST00000495705 PHF5AQ7RTV0 110 aaKnown RBP12.5□□□□□ -0.41
LMO4-204ENST00000495705 E9PLD3 99 aa12.49□□□□□ -0.41
LMO4-204ENST00000495705 LGALS3P17931 250 aaKnown RBP12.49□□□□□ -0.41
LMO4-204ENST00000495705 NMUP48645 174 aa12.49□□□□□ -0.41
LMO4-204ENST00000495705 AKR1D1P51857 326 aa12.49□□□□□ -0.41
LMO4-204ENST00000495705 KRTAP7-1Q8IUC3 87 aa12.49□□□□□ -0.41
LMO4-204ENST00000495705 HIST1H2BLQ99880 126 aa12.49□□□□□ -0.41
LMO4-204ENST00000495705 LINC00587B1AMM8 73 aa12.48□□□□□ -0.41
LMO4-204ENST00000495705 PRR3P79522 188 aaKnown RBP12.48□□□□□ -0.41
LMO4-204ENST00000495705 SERTAD4-AS1Q5TG53 156 aa12.48□□□□□ -0.41
LMO4-204ENST00000495705 PLA2G2DQ9UNK4 145 aa12.48□□□□□ -0.41
LMO4-204ENST00000495705 LINC00158P58513 81 aa12.47□□□□□ -0.41
LMO4-204ENST00000495705 MEIG1Q5JSS6 88 aa12.47□□□□□ -0.41
LMO4-204ENST00000495705 SND1-IT1Q9HBX3 110 aa12.46□□□□□ -0.41
LMO4-204ENST00000495705 SNRPEP62304 92 aaKnown RBP12.45□□□□□ -0.42
LMO4-204ENST00000495705 TP73-AS1Q9UF72 201 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms