RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 K7EP13 123 aa13.78□□□□□ -0.2
KPNA1-210ENST00000494339 CIRBPQ14011 172 aaKnown RBP13.78□□□□□ -0.2
KPNA1-210ENST00000494339 LITAFQ99732 161 aa13.78□□□□□ -0.2
KPNA1-210ENST00000494339 COX11Q9Y6N1 276 aa13.78□□□□□ -0.2
KPNA1-210ENST00000494339 SFTA2Q6UW10 78 aa13.77□□□□□ -0.21
KPNA1-210ENST00000494339 SPANXDQ9BXN6 97 aa13.76□□□□□ -0.21
KPNA1-210ENST00000494339 NHP2Q9NX24 153 aaKnown RBP13.76□□□□□ -0.21
KPNA1-210ENST00000494339 SPANXCQ9NY87 97 aa13.76□□□□□ -0.21
KPNA1-210ENST00000494339 A0A1B0GWB2 263 aa13.74□□□□□ -0.21
KPNA1-210ENST00000494339 RPL24P83731 157 aaKnown RBP13.73□□□□□ -0.21
KPNA1-210ENST00000494339 Q8IZM0 81 aa13.73□□□□□ -0.21
KPNA1-210ENST00000494339 DNAH1Q9P2D7 4330 aa13.73□□□□□ -0.21
KPNA1-210ENST00000494339 APOMO95445 188 aa13.72□□□□□ -0.21
KPNA1-210ENST00000494339 PRSS2P07478 247 aa13.72□□□□□ -0.21
KPNA1-210ENST00000494339 NBDYA0A0U1RRE5 68 aa13.72□□□□□ -0.21
KPNA1-210ENST00000494339 C3orf84H3BNL1 204 aa13.72□□□□□ -0.21
KPNA1-210ENST00000494339 C6orf226Q5I0X4 101 aa13.72□□□□□ -0.21
KPNA1-210ENST00000494339 ADAMTSL4-AS1Q5T5F5 129 aa13.72□□□□□ -0.21
KPNA1-210ENST00000494339 RMI2Q96E14 147 aa13.72□□□□□ -0.21
KPNA1-210ENST00000494339 MUSTN1Q8IVN3 82 aa13.71□□□□□ -0.21
KPNA1-210ENST00000494339 C9orf118A6NHY6 69 aa13.7□□□□□ -0.22
KPNA1-210ENST00000494339 IFITM1P13164 125 aa13.7□□□□□ -0.22
KPNA1-210ENST00000494339 TTC32Q5I0X7 151 aa13.7□□□□□ -0.22
KPNA1-210ENST00000494339 MEIG1Q5JSS6 88 aa13.7□□□□□ -0.22
KPNA1-210ENST00000494339 K7ERJ3 54 aa13.69□□□□□ -0.22
KPNA1-210ENST00000494339 KIAA0087Q14695 138 aa13.69□□□□□ -0.22
KPNA1-210ENST00000494339 RAB37Q96AX2 223 aa13.69□□□□□ -0.22
KPNA1-210ENST00000494339 LINC00526Q96FQ7 95 aa13.69□□□□□ -0.22
KPNA1-210ENST00000494339 SPAG11BQ08648 103 aa13.68□□□□□ -0.22
KPNA1-210ENST00000494339 COPS9Q8WXC6 57 aa13.68□□□□□ -0.22
KPNA1-210ENST00000494339 CXCL5P42830 114 aa13.68□□□□□ -0.22
KPNA1-210ENST00000494339 CFAP161Q6P656 301 aa13.68□□□□□ -0.22
KPNA1-210ENST00000494339 C2orf82Q6UX34 121 aa13.68□□□□□ -0.22
KPNA1-210ENST00000494339 VPS13DQ5THJ4 4388 aa13.67□□□□□ -0.22
KPNA1-210ENST00000494339 M0R2N4 97 aa13.67□□□□□ -0.22
KPNA1-210ENST00000494339 LY6G6CO95867 125 aa13.67□□□□□ -0.22
KPNA1-210ENST00000494339 A4D1N5 150 aa13.66□□□□□ -0.22
KPNA1-210ENST00000494339 CKS1BP61024 79 aa13.66□□□□□ -0.22
KPNA1-210ENST00000494339 HIGD2BQ4VC39 106 aa13.66□□□□□ -0.22
KPNA1-210ENST00000494339 C15orf56Q8N910 161 aa13.66□□□□□ -0.22
KPNA1-210ENST00000494339 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.66□□□□□ -0.22
KPNA1-210ENST00000494339 C6orf223Q8N319 242 aa13.66□□□□□ -0.22
KPNA1-210ENST00000494339 PPDPFQ9H3Y8 114 aa13.64□□□□□ -0.23
KPNA1-210ENST00000494339 H3BUT2 72 aa13.64□□□□□ -0.23
KPNA1-210ENST00000494339 CFC1BP0CG36 223 aa13.64□□□□□ -0.23
KPNA1-210ENST00000494339 CFC1P0CG37 223 aa13.64□□□□□ -0.23
KPNA1-210ENST00000494339 LINC00476Q8WZB0 136 aa13.64□□□□□ -0.23
KPNA1-210ENST00000494339 A0A0U1RRA0 63 aa13.63□□□□□ -0.23
KPNA1-210ENST00000494339 ZNF561-AS1K7EIQ3 104 aa13.62□□□□□ -0.23
KPNA1-210ENST00000494339 DAND5Q8N907 189 aa13.62□□□□□ -0.23
KPNA1-210ENST00000494339 LINC00308Q8TCZ7 52 aa13.62□□□□□ -0.23
KPNA1-210ENST00000494339 A0A0B4J2C4 111 aa13.62□□□□□ -0.23
KPNA1-210ENST00000494339 VAMP3Q15836 100 aa13.62□□□□□ -0.23
KPNA1-210ENST00000494339 LECT2O14960 151 aa13.61□□□□□ -0.23
KPNA1-210ENST00000494339 PSCAO43653 123 aa13.61□□□□□ -0.23
KPNA1-210ENST00000494339 USP17L23D6RBM5 183 aa13.6□□□□□ -0.23
KPNA1-210ENST00000494339 NTN5Q8WTR8 489 aaPredicted RBP13.6□□□□□ -0.23
KPNA1-210ENST00000494339 PRO1854Q9UHT4 67 aa13.6□□□□□ -0.23
KPNA1-210ENST00000494339 UNQ6190/PRO20217Q6UXQ8 127 aa13.6□□□□□ -0.23
KPNA1-210ENST00000494339 ERG28Q9UKR5 140 aa13.6□□□□□ -0.23
KPNA1-210ENST00000494339 GVQW2A0A096LPI5 108 aaPredicted RBP13.59□□□□□ -0.23
KPNA1-210ENST00000494339 A0A1W2PPM0 123 aa13.59□□□□□ -0.23
KPNA1-210ENST00000494339 LINC00158P58513 81 aa13.59□□□□□ -0.23
KPNA1-210ENST00000494339 NPC2P61916 151 aa13.59□□□□□ -0.23
KPNA1-210ENST00000494339 C10orf25Q5T742 122 aa13.59□□□□□ -0.23
KPNA1-210ENST00000494339 NAA38Q9BRA0 125 aaKnown RBP13.58□□□□□ -0.24
KPNA1-210ENST00000494339 PGPEP1Q9NXJ5 209 aa13.58□□□□□ -0.24
KPNA1-210ENST00000494339 KMT2AQ03164 3969 aa13.57□□□□□ -0.24
KPNA1-210ENST00000494339 FABP2P12104 132 aa13.57□□□□□ -0.24
KPNA1-210ENST00000494339 PFN2P35080 140 aa13.57□□□□□ -0.24
KPNA1-210ENST00000494339 COX17Q14061 63 aa13.57□□□□□ -0.24
KPNA1-210ENST00000494339 Q6ZR54 194 aa13.57□□□□□ -0.24
KPNA1-210ENST00000494339 MIR7-3HGQ8N6C7 128 aa13.57□□□□□ -0.24
KPNA1-210ENST00000494339 CAMK2N2Q96S95 79 aa13.57□□□□□ -0.24
KPNA1-210ENST00000494339 C9orf116Q5BN46 136 aaPredicted RBP13.56□□□□□ -0.24
KPNA1-210ENST00000494339 DNAH10Q8IVF4 4471 aa13.56□□□□□ -0.24
KPNA1-210ENST00000494339 EIF4EBP3O60516 100 aaPredicted RBP13.56□□□□□ -0.24
KPNA1-210ENST00000494339 WFDC2Q14508 124 aa13.56□□□□□ -0.24
KPNA1-210ENST00000494339 UBE2V1Q13404 147 aa13.55□□□□□ -0.24
KPNA1-210ENST00000494339 SOSTDC1Q6X4U4 206 aa13.54□□□□□ -0.24
KPNA1-210ENST00000494339 TSPAN13O95857 204 aa13.54□□□□□ -0.24
KPNA1-210ENST00000494339 Q6ZRN7 208 aaPredicted RBP13.54□□□□□ -0.24
KPNA1-210ENST00000494339 C2orf48Q96LS8 159 aa13.53□□□□□ -0.24
KPNA1-210ENST00000494339 Q6ZRU5 148 aa13.52□□□□□ -0.24
KPNA1-210ENST00000494339 GTF2H5Q6ZYL4 71 aa13.52□□□□□ -0.24
KPNA1-210ENST00000494339 C6orf48Q9UBA6 75 aa13.52□□□□□ -0.24
KPNA1-210ENST00000494339 GAGE10A6NGK3 116 aa13.52□□□□□ -0.25
KPNA1-210ENST00000494339 SPCS1Q9Y6A9 102 aa13.51□□□□□ -0.25
KPNA1-210ENST00000494339 K7EP34 96 aa13.5□□□□□ -0.25
KPNA1-210ENST00000494339 KMT2CQ8NEZ4 4911 aaKnown RBP13.5□□□□□ -0.25
KPNA1-210ENST00000494339 ALMS1Q8TCU4 4167 aa13.49□□□□□ -0.25
KPNA1-210ENST00000494339 F8WDY8 70 aa13.49□□□□□ -0.25
KPNA1-210ENST00000494339 SLPIP03973 132 aa13.49□□□□□ -0.25
KPNA1-210ENST00000494339 SYCNQ0VAF6 134 aa13.49□□□□□ -0.25
KPNA1-210ENST00000494339 TRBV30A0A0K0K1B3 111 aa13.49□□□□□ -0.25
KPNA1-210ENST00000494339 LYRM7Q5U5X0 104 aa13.49□□□□□ -0.25
KPNA1-210ENST00000494339 HYDINQ4G0P3 5121 aa13.48□□□□□ -0.25
KPNA1-210ENST00000494339 LOC107984156A0A0G2JMH3 177 aa13.48□□□□□ -0.25
KPNA1-210ENST00000494339 ARL17AQ8IVW1 177 aa13.48□□□□□ -0.25
KPNA1-210ENST00000494339 SND1-IT1Q9HBX3 110 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms