RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 PYGO1Q9Y3Y4 419 aa5.03□□□□□ -1.6
RIF1-211ENST00000494333 IGLV4-3A0A075B6K6 122 aa5.02□□□□□ -1.61
RIF1-211ENST00000494333 A0A0J9YXV3 536 aa5.02□□□□□ -1.61
RIF1-211ENST00000494333 A0A1W2PNN7 141 aa5.02□□□□□ -1.61
RIF1-211ENST00000494333 Q8N8P6 123 aa5.02□□□□□ -1.61
RIF1-211ENST00000494333 OR10D4PQ8NGN7 298 aa5.02□□□□□ -1.61
RIF1-211ENST00000494333 TGIF2-C20orf24A0A0A6YYL0 155 aa5.01□□□□□ -1.61
RIF1-211ENST00000494333 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.01□□□□□ -1.61
RIF1-211ENST00000494333 PRR3P79522 188 aaKnown RBP5.01□□□□□ -1.61
RIF1-211ENST00000494333 RPL18AQ02543 176 aaKnown RBP5.01□□□□□ -1.61
RIF1-211ENST00000494333 LINC00242Q5T6M2 205 aa5.01□□□□□ -1.61
RIF1-211ENST00000494333 C2orf66Q6UXQ4 117 aa5.01□□□□□ -1.61
RIF1-211ENST00000494333 TEX43Q6ZNM6 134 aa5.01□□□□□ -1.61
RIF1-211ENST00000494333 TMEM141Q96I45 108 aa5.01□□□□□ -1.61
RIF1-211ENST00000494333 MRPL35Q9NZE8 188 aaKnown RBP5.01□□□□□ -1.61
RIF1-211ENST00000494333 CYSLTR1Q9Y271 337 aa5.01□□□□□ -1.61
RIF1-211ENST00000494333 A0A087WZ39 114 aa5□□□□□ -1.61
RIF1-211ENST00000494333 TMEM218A2RU14 115 aa5□□□□□ -1.61
RIF1-211ENST00000494333 F8WDY8 70 aa5□□□□□ -1.61
RIF1-211ENST00000494333 NDUFA1O15239 70 aa5□□□□□ -1.61
RIF1-211ENST00000494333 MT1HL1P0DM35 61 aa5□□□□□ -1.61
RIF1-211ENST00000494333 ADCYAP1P18509 176 aa5□□□□□ -1.61
RIF1-211ENST00000494333 IFITM2Q01629 132 aa5□□□□□ -1.61
RIF1-211ENST00000494333 KIAA1644Q3SXP7 199 aa5□□□□□ -1.61
RIF1-211ENST00000494333 ORMDL2Q53FV1 153 aa5□□□□□ -1.61
RIF1-211ENST00000494333 C9orf116Q5BN46 136 aaPredicted RBP5□□□□□ -1.61
RIF1-211ENST00000494333 ZC2HC1BQ5TFG8 222 aa5□□□□□ -1.61
RIF1-211ENST00000494333 UQCC3Q6UW78 93 aa5□□□□□ -1.61
RIF1-211ENST00000494333 UNQ6190/PRO20217Q6UXQ8 127 aa5□□□□□ -1.61
RIF1-211ENST00000494333 Q6ZRP5 223 aa5□□□□□ -1.61
RIF1-211ENST00000494333 IMMP2LQ96T52 175 aa5□□□□□ -1.61
RIF1-211ENST00000494333 LITAFQ99732 161 aa5□□□□□ -1.61
RIF1-211ENST00000494333 VCX2Q9H322 139 aa5□□□□□ -1.61
RIF1-211ENST00000494333 IGLV9-49A0A0B4J1Y8 123 aa4.99□□□□□ -1.61
RIF1-211ENST00000494333 K7EMI3 77 aa4.99□□□□□ -1.61
RIF1-211ENST00000494333 UBE2D1P51668 147 aa4.99□□□□□ -1.61
RIF1-211ENST00000494333 SPINK6Q6UWN8 80 aa4.99□□□□□ -1.61
RIF1-211ENST00000494333 Q6ZN92 141 aa4.99□□□□□ -1.61
RIF1-211ENST00000494333 C2orf88Q9BSF0 95 aa4.99□□□□□ -1.61
RIF1-211ENST00000494333 NXT2Q9NPJ8 142 aaKnown RBP4.99□□□□□ -1.61
RIF1-211ENST00000494333 LRP1Q07954 4544 aaKnown RBP4.98□□□□□ -1.61
RIF1-211ENST00000494333 IGIPA6NJ69 53 aa4.98□□□□□ -1.61
RIF1-211ENST00000494333 SRSF9Q13242 221 aaKnown RBP eCLIP4.98□□□□□ -1.61
RIF1-211ENST00000494333 KIAA0087Q14695 138 aa4.98□□□□□ -1.61
RIF1-211ENST00000494333 PHF5AQ7RTV0 110 aaKnown RBP4.98□□□□□ -1.61
RIF1-211ENST00000494333 LINC01600Q96MT4 127 aa4.98□□□□□ -1.61
RIF1-211ENST00000494333 AMELXQ99217 191 aa4.98□□□□□ -1.61
RIF1-211ENST00000494333 C6orf48Q9UBA6 75 aa4.98□□□□□ -1.61
RIF1-211ENST00000494333 TLX1NBP0CAT3 122 aa4.97□□□□□ -1.61
RIF1-211ENST00000494333 S100PP25815 95 aa4.97□□□□□ -1.61
RIF1-211ENST00000494333 G0S2P27469 103 aa4.97□□□□□ -1.61
RIF1-211ENST00000494333 C2orf82Q6UX34 121 aa4.97□□□□□ -1.61
RIF1-211ENST00000494333 LINC00173Q6ZV60 143 aa4.97□□□□□ -1.61
RIF1-211ENST00000494333 SEC11CQ9BY50 192 aa4.97□□□□□ -1.61
RIF1-211ENST00000494333 TRAV9-1A0A075B6T8 112 aa4.96□□□□□ -1.62
RIF1-211ENST00000494333 FAM168BA1KXE4 195 aa4.96□□□□□ -1.62
RIF1-211ENST00000494333 MT-ND6P03923 174 aa4.96□□□□□ -1.62
RIF1-211ENST00000494333 C6orf226Q5I0X4 101 aa4.96□□□□□ -1.62
RIF1-211ENST00000494333 REG3GQ6UW15 175 aa4.96□□□□□ -1.62
RIF1-211ENST00000494333 LINC01561Q8N1V8 128 aa4.96□□□□□ -1.62
RIF1-211ENST00000494333 TOMM6Q96B49 74 aa4.96□□□□□ -1.62
RIF1-211ENST00000494333 PACRGQ96M98 296 aaPredicted RBP4.96□□□□□ -1.62
RIF1-211ENST00000494333 GNB1LQ9BYB4 327 aa4.96□□□□□ -1.62
RIF1-211ENST00000494333 TOMM7Q9P0U1 55 aa4.96□□□□□ -1.62
RIF1-211ENST00000494333 PSORS1C2Q9UIG4 136 aa4.96□□□□□ -1.62
RIF1-211ENST00000494333 TRBV30A0A0K0K1B3 111 aa4.95□□□□□ -1.62
RIF1-211ENST00000494333 CKS1BP61024 79 aa4.95□□□□□ -1.62
RIF1-211ENST00000494333 SEC11AP67812 179 aa4.95□□□□□ -1.62
RIF1-211ENST00000494333 C1orf137Q5JT78 98 aa4.95□□□□□ -1.62
RIF1-211ENST00000494333 NOTCH2NLQ7Z3S9 236 aa4.95□□□□□ -1.62
RIF1-211ENST00000494333 ERASQ7Z444 233 aa4.95□□□□□ -1.62
RIF1-211ENST00000494333 FAM19A3Q7Z5A8 133 aa4.95□□□□□ -1.62
RIF1-211ENST00000494333 COMMD7Q86VX2 200 aa4.95□□□□□ -1.62
RIF1-211ENST00000494333 SCGB3A1Q96QR1 104 aa4.95□□□□□ -1.62
RIF1-211ENST00000494333 TIMM17AQ99595 171 aa4.95□□□□□ -1.62
RIF1-211ENST00000494333 GEMIN7Q9H840 131 aaKnown RBP4.95□□□□□ -1.62
RIF1-211ENST00000494333 NDUFC2-KCTD14E9PQ53 114 aa4.94□□□□□ -1.62
RIF1-211ENST00000494333 HERVK_113P63121 156 aa4.94□□□□□ -1.62
RIF1-211ENST00000494333 FAM19A5Q7Z5A7 132 aaPredicted RBP4.94□□□□□ -1.62
RIF1-211ENST00000494333 ALKBH7Q9BT30 221 aaPredicted RBP4.94□□□□□ -1.62
RIF1-211ENST00000494333 RPS10P5Q9NQ39 176 aa4.94□□□□□ -1.62
RIF1-211ENST00000494333 CDKN2A-AS1Q9UH64 79 aa4.94□□□□□ -1.62
RIF1-211ENST00000494333 KRTAP10-8P60410 259 aa4.93□□□□□ -1.62
RIF1-211ENST00000494333 FABP9Q0Z7S8 132 aa4.93□□□□□ -1.62
RIF1-211ENST00000494333 COX19Q49B96 90 aa4.93□□□□□ -1.62
RIF1-211ENST00000494333 KRTAP11-1Q8IUC1 163 aa4.93□□□□□ -1.62
RIF1-211ENST00000494333 KRTAP7-1Q8IUC3 87 aa4.93□□□□□ -1.62
RIF1-211ENST00000494333 Q8IZM0 81 aa4.93□□□□□ -1.62
RIF1-211ENST00000494333 LINC01546A6NGU7 62 aa4.92□□□□□ -1.62
RIF1-211ENST00000494333 LINC01549A6NIU2 74 aa4.92□□□□□ -1.62
RIF1-211ENST00000494333 IGLV7-43P04211 117 aa4.92□□□□□ -1.62
RIF1-211ENST00000494333 C9orf129Q5T035 196 aaKnown RBP4.92□□□□□ -1.62
RIF1-211ENST00000494333 C10orf91Q5T1B1 145 aa4.92□□□□□ -1.62
RIF1-211ENST00000494333 FA2HQ7L5A8 372 aa4.92□□□□□ -1.62
RIF1-211ENST00000494333 LINC00469Q8N7U9 141 aa4.92□□□□□ -1.62
RIF1-211ENST00000494333 SMCO4Q9NRQ5 59 aa4.92□□□□□ -1.62
RIF1-211ENST00000494333 CARHSP1Q9Y2V2 147 aaKnown RBP4.92□□□□□ -1.62
RIF1-211ENST00000494333 M0QXV9 152 aa4.91□□□□□ -1.62
RIF1-211ENST00000494333 UBE2BP63146 152 aa4.91□□□□□ -1.62
RIF1-211ENST00000494333 RHEBQ15382 184 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms