RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 SMIM24O75264 130 aa0.22□□□□□ -2.37
ITGB1-216ENST00000493758 CCKP06307 115 aa0.22□□□□□ -2.37
ITGB1-216ENST00000493758 MT1HP80294 61 aa0.22□□□□□ -2.37
ITGB1-216ENST00000493758 PLGLB1Q02325 96 aa0.22□□□□□ -2.37
ITGB1-216ENST00000493758 KLKP1Q107X0 134 aa0.22□□□□□ -2.37
ITGB1-216ENST00000493758 SPINK6Q6UWN8 80 aa0.22□□□□□ -2.37
ITGB1-216ENST00000493758 MAGOHBQ96A72 148 aaKnown RBP0.22□□□□□ -2.37
ITGB1-216ENST00000493758 VPS25Q9BRG1 176 aa0.22□□□□□ -2.37
ITGB1-216ENST00000493758 SLC35B3Q9H1N7 401 aa0.22□□□□□ -2.37
ITGB1-216ENST00000493758 SPANXA1Q9NS26 97 aa0.22□□□□□ -2.37
ITGB1-216ENST00000493758 TMEM14BQ9NUH8 114 aa0.22□□□□□ -2.37
ITGB1-216ENST00000493758 SPANXCQ9NY87 97 aa0.22□□□□□ -2.37
ITGB1-216ENST00000493758 TRAV36DV7A0A075B6V5 113 aa0.21□□□□□ -2.38
ITGB1-216ENST00000493758 DEGS1O15121 323 aa0.21□□□□□ -2.38
ITGB1-216ENST00000493758 CD3DP04234 171 aa0.21□□□□□ -2.38
ITGB1-216ENST00000493758 CMPK1P30085 196 aa0.21□□□□□ -2.38
ITGB1-216ENST00000493758 KRTAP19-2Q3LHN2 52 aa0.21□□□□□ -2.38
ITGB1-216ENST00000493758 TCTE3Q8IZS6 198 aa0.21□□□□□ -2.38
ITGB1-216ENST00000493758 PPP1R1CQ8WVI7 109 aa0.21□□□□□ -2.38
ITGB1-216ENST00000493758 PPDPFLQ8WWR9 84 aa0.21□□□□□ -2.38
ITGB1-216ENST00000493758 SPRR2FQ96RM1 72 aa0.21□□□□□ -2.38
ITGB1-216ENST00000493758 BANF2Q9H503 90 aa0.21□□□□□ -2.38
ITGB1-216ENST00000493758 MRPL40Q9NQ50 206 aaKnown RBP0.21□□□□□ -2.38
ITGB1-216ENST00000493758 COA4Q9NYJ1 87 aa0.21□□□□□ -2.38
ITGB1-216ENST00000493758 TAS2R8Q9NYW2 309 aa0.21□□□□□ -2.38
ITGB1-216ENST00000493758 FOCADQ5VW36 1801 aa0.21□□□□□ -2.38
ITGB1-216ENST00000493758 BORCS7-ASMTA0A0B4J1R7 106 aa0.2□□□□□ -2.38
ITGB1-216ENST00000493758 TEX49A0A1B0GTD5 131 aa0.2□□□□□ -2.38
ITGB1-216ENST00000493758 A0A1B0GX51 115 aa0.2□□□□□ -2.38
ITGB1-216ENST00000493758 MT-ND4LP03901 98 aa0.2□□□□□ -2.38
ITGB1-216ENST00000493758 AKR1D1P51857 326 aa0.2□□□□□ -2.38
ITGB1-216ENST00000493758 OR8B8Q15620 311 aa0.2□□□□□ -2.38
ITGB1-216ENST00000493758 KRTAP20-2Q3LI61 65 aa0.2□□□□□ -2.38
ITGB1-216ENST00000493758 CCDC153Q494R4 210 aa0.2□□□□□ -2.38
ITGB1-216ENST00000493758 SLC25A26Q70HW3 274 aa0.2□□□□□ -2.38
ITGB1-216ENST00000493758 DSCR8Q96T75 97 aa0.2□□□□□ -2.38
ITGB1-216ENST00000493758 MYH8P13535 1937 aa0.2□□□□□ -2.38
ITGB1-216ENST00000493758 NINQ8N4C6 2090 aa0.2□□□□□ -2.38
ITGB1-216ENST00000493758 KIF20BQ96Q89 1820 aa0.2□□□□□ -2.38
ITGB1-216ENST00000493758 TRAV12-2A0A075B6T6 113 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 TRAV2A0A0B4J234 112 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 C9JAW5 83 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 YPEL1O60688 119 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 TNFSF15O95150 251 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 OR2H2O95918 312 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 RBP4P02753 201 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 DBIP07108 87 aaKnown RBP0.19□□□□□ -2.38
ITGB1-216ENST00000493758 SCTP09683 121 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 NBEAP1P0C6P0 100 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 HLA-DRB4P13762 266 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 B2MP61769 119 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 TMEM244Q5VVB8 128 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 Q5XG85 94 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 TMEM91Q6ZNR0 172 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 TAC4Q86UU9 113 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 SNX29P2Q8IUI4 249 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 TMEM141Q96I45 108 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 AIF1LQ9BQI0 150 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 HIGD1AQ9Y241 93 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 HLA-DRB4X5D2U9 266 aa0.19□□□□□ -2.38
ITGB1-216ENST00000493758 CCDC171Q6TFL3 1326 aa0.18□□□□□ -2.38
ITGB1-216ENST00000493758 A0A1B0GW64 132 aa0.18□□□□□ -2.38
ITGB1-216ENST00000493758 MCRIP1C9JLW8 97 aa0.18□□□□□ -2.38
ITGB1-216ENST00000493758 F2Z2F3 143 aa0.18□□□□□ -2.38
ITGB1-216ENST00000493758 ZNF670-ZNF695F2Z2N8 137 aa0.18□□□□□ -2.38
ITGB1-216ENST00000493758 MPC1LP0DKB6 136 aa0.18□□□□□ -2.38
ITGB1-216ENST00000493758 ATP6V0E2Q8NHE4 81 aa0.18□□□□□ -2.38
ITGB1-216ENST00000493758 BET1LQ9NYM9 111 aa0.18□□□□□ -2.38
ITGB1-216ENST00000493758 NOP16Q9Y3C1 178 aaKnown RBP0.18□□□□□ -2.38
ITGB1-216ENST00000493758 DNAJC15Q9Y5T4 150 aa0.18□□□□□ -2.38
ITGB1-216ENST00000493758 MYH1P12882 1939 aa0.17□□□□□ -2.38
ITGB1-216ENST00000493758 A0A096LNT2 108 aa0.17□□□□□ -2.38
ITGB1-216ENST00000493758 CXorf51AA0A1B0GTR3 108 aa0.17□□□□□ -2.38
ITGB1-216ENST00000493758 TCRBV3S1A0A5B6 114 aa0.17□□□□□ -2.38
ITGB1-216ENST00000493758 TFF1P04155 84 aa0.17□□□□□ -2.38
ITGB1-216ENST00000493758 PYYP10082 97 aa0.17□□□□□ -2.38
ITGB1-216ENST00000493758 DR1Q01658 176 aa0.17□□□□□ -2.38
ITGB1-216ENST00000493758 TFF3Q07654 80 aa0.17□□□□□ -2.38
ITGB1-216ENST00000493758 DEFB121Q5J5C9 76 aa0.17□□□□□ -2.38
ITGB1-216ENST00000493758 CLLU1Q5K131 121 aa0.17□□□□□ -2.38
ITGB1-216ENST00000493758 DYNLRB2Q8TF09 96 aa0.17□□□□□ -2.38
ITGB1-216ENST00000493758 PRR15LQ9BU68 103 aa0.17□□□□□ -2.38
ITGB1-216ENST00000493758 MYH9P35579 1960 aaKnown RBP0.17□□□□□ -2.38
ITGB1-216ENST00000493758 PLXNA2O75051 1894 aa0.16□□□□□ -2.38
ITGB1-216ENST00000493758 RBAKDNA6NC62 111 aa0.16□□□□□ -2.38
ITGB1-216ENST00000493758 J3QLW9 94 aa0.16□□□□□ -2.38
ITGB1-216ENST00000493758 CYP2G1PQ6ZSU1 146 aa0.16□□□□□ -2.38
ITGB1-216ENST00000493758 VMO1Q7Z5L0 202 aa0.16□□□□□ -2.38
ITGB1-216ENST00000493758 NDUFA11Q86Y39 141 aa0.16□□□□□ -2.38
ITGB1-216ENST00000493758 PYDC1Q8WXC3 89 aa0.16□□□□□ -2.38
ITGB1-216ENST00000493758 PROK2Q9HC23 129 aa0.16□□□□□ -2.38
ITGB1-216ENST00000493758 ERG28Q9UKR5 140 aa0.16□□□□□ -2.38
ITGB1-216ENST00000493758 CCDC179H3BU77 68 aa0.15□□□□□ -2.39
ITGB1-216ENST00000493758 SCGB1A1P11684 91 aa0.15□□□□□ -2.39
ITGB1-216ENST00000493758 SLC25A6P12236 298 aa0.15□□□□□ -2.39
ITGB1-216ENST00000493758 ELOF1P60002 83 aaKnown RBP0.15□□□□□ -2.39
ITGB1-216ENST00000493758 NCS1P62166 190 aa0.15□□□□□ -2.39
ITGB1-216ENST00000493758 HAMPP81172 84 aa0.15□□□□□ -2.39
ITGB1-216ENST00000493758 DEFB109BQ30KR1 87 aa0.15□□□□□ -2.39
ITGB1-216ENST00000493758 MORN2Q502X0 79 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms