RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 HERVK_113P63121 156 aa8.85□□□□□ -0.99
ATG4B-223ENST00000493618 TIMM17AQ99595 171 aa8.85□□□□□ -0.99
ATG4B-223ENST00000493618 XAGE1AQ9HD64 81 aa8.85□□□□□ -0.99
ATG4B-223ENST00000493618 LPAP08519 4548 aa8.85□□□□□ -0.99
ATG4B-223ENST00000493618 SCGB3A1Q96QR1 104 aa8.84□□□□□ -0.99
ATG4B-223ENST00000493618 TMEM218A2RU14 115 aa8.83□□□□□ -1
ATG4B-223ENST00000493618 PAPPA-AS1Q5QFB9 102 aa8.83□□□□□ -1
ATG4B-223ENST00000493618 G0S2P27469 103 aa8.82□□□□□ -1
ATG4B-223ENST00000493618 SEC11AP67812 179 aa8.82□□□□□ -1
ATG4B-223ENST00000493618 IFITM2Q01629 132 aa8.82□□□□□ -1
ATG4B-223ENST00000493618 ERASQ7Z444 233 aa8.82□□□□□ -1
ATG4B-223ENST00000493618 C22orf24Q9Y442 160 aa8.82□□□□□ -1
ATG4B-223ENST00000493618 TRAV9-1A0A075B6T8 112 aa8.81□□□□□ -1
ATG4B-223ENST00000493618 F8VRH5 84 aa8.81□□□□□ -1
ATG4B-223ENST00000493618 KRTAP1-4P0C5Y4 121 aa8.81□□□□□ -1
ATG4B-223ENST00000493618 UQCC3Q6UW78 93 aa8.81□□□□□ -1
ATG4B-223ENST00000493618 SMIM1B2RUZ4 78 aa8.8□□□□□ -1
ATG4B-223ENST00000493618 S100PP25815 95 aa8.8□□□□□ -1
ATG4B-223ENST00000493618 COX7B2Q8TF08 81 aa8.79□□□□□ -1
ATG4B-223ENST00000493618 GNB1LQ9BYB4 327 aa8.79□□□□□ -1
ATG4B-223ENST00000493618 IGLV1-50A0A075B6I6 118 aa8.78□□□□□ -1
ATG4B-223ENST00000493618 TINCRA0A1B0GVN0 87 aa8.78□□□□□ -1
ATG4B-223ENST00000493618 SPINK8P0C7L1 97 aa8.78□□□□□ -1
ATG4B-223ENST00000493618 SEC11CQ9BY50 192 aa8.78□□□□□ -1
ATG4B-223ENST00000493618 CST9LQ9H4G1 147 aa8.78□□□□□ -1
ATG4B-223ENST00000493618 CXCL5P42830 114 aa8.77□□□□□ -1.01
ATG4B-223ENST00000493618 RAB5BP61020 215 aa8.77□□□□□ -1.01
ATG4B-223ENST00000493618 FABP9Q0Z7S8 132 aa8.77□□□□□ -1.01
ATG4B-223ENST00000493618 LBHQ53QV2 105 aaPredicted RBP8.77□□□□□ -1.01
ATG4B-223ENST00000493618 PDZD11Q5EBL8 140 aa8.77□□□□□ -1.01
ATG4B-223ENST00000493618 FA2HQ7L5A8 372 aa8.77□□□□□ -1.01
ATG4B-223ENST00000493618 COMMD7Q86VX2 200 aa8.77□□□□□ -1.01
ATG4B-223ENST00000493618 MRPL18Q9H0U6 180 aaKnown RBP8.77□□□□□ -1.01
ATG4B-223ENST00000493618 LINC01546A6NGU7 62 aa8.76□□□□□ -1.01
ATG4B-223ENST00000493618 NUPR1O60356 82 aa8.76□□□□□ -1.01
ATG4B-223ENST00000493618 ZNF861PO60384 105 aa8.76□□□□□ -1.01
ATG4B-223ENST00000493618 MRPL55Q7Z7F7 128 aaKnown RBP8.76□□□□□ -1.01
ATG4B-223ENST00000493618 SMCO4Q9NRQ5 59 aa8.76□□□□□ -1.01
ATG4B-223ENST00000493618 IGLV5-45A0A087WSX0 123 aa8.75□□□□□ -1.01
ATG4B-223ENST00000493618 RPL37AP8A6NKH3 93 aa8.75□□□□□ -1.01
ATG4B-223ENST00000493618 PMVKQ15126 192 aa8.75□□□□□ -1.01
ATG4B-223ENST00000493618 GAGE10A6NGK3 116 aa8.74□□□□□ -1.01
ATG4B-223ENST00000493618 RPS10P5Q9NQ39 176 aa8.74□□□□□ -1.01
ATG4B-223ENST00000493618 NDUFA6P56556 154 aa8.73□□□□□ -1.01
ATG4B-223ENST00000493618 LINC00167Q96N53 147 aa8.73□□□□□ -1.01
ATG4B-223ENST00000493618 TP73-AS1Q9UF72 201 aa8.73□□□□□ -1.01
ATG4B-223ENST00000493618 LINC01549A6NIU2 74 aa8.72□□□□□ -1.01
ATG4B-223ENST00000493618 COX19Q49B96 90 aa8.72□□□□□ -1.01
ATG4B-223ENST00000493618 BCE1O60756 84 aa8.71□□□□□ -1.02
ATG4B-223ENST00000493618 SCO1O75880 301 aa8.71□□□□□ -1.02
ATG4B-223ENST00000493618 RPL13AP40429 203 aaKnown RBP8.71□□□□□ -1.02
ATG4B-223ENST00000493618 A0A096LNJ9 63 aa8.7□□□□□ -1.02
ATG4B-223ENST00000493618 H3BRM9 83 aa8.7□□□□□ -1.02
ATG4B-223ENST00000493618 PMCHL1Q16048 86 aa8.7□□□□□ -1.02
ATG4B-223ENST00000493618 C10orf91Q5T1B1 145 aa8.7□□□□□ -1.02
ATG4B-223ENST00000493618 URB1-AS1Q96HZ7 61 aa8.7□□□□□ -1.02
ATG4B-223ENST00000493618 CARHSP1Q9Y2V2 147 aaKnown RBP8.7□□□□□ -1.02
ATG4B-223ENST00000493618 IGLC3P0DOY3 106 aa8.69□□□□□ -1.02
ATG4B-223ENST00000493618 PFN2P35080 140 aa8.69□□□□□ -1.02
ATG4B-223ENST00000493618 RPL28P46779 137 aaKnown RBP8.69□□□□□ -1.02
ATG4B-223ENST00000493618 RHEBQ15382 184 aa8.69□□□□□ -1.02
ATG4B-223ENST00000493618 PRR4Q16378 134 aa8.69□□□□□ -1.02
ATG4B-223ENST00000493618 NKAPP1Q8N9T2 125 aa8.69□□□□□ -1.02
ATG4B-223ENST00000493618 A0A087X002 238 aa8.68□□□□□ -1.02
ATG4B-223ENST00000493618 ATP5LO75964 103 aa8.68□□□□□ -1.02
ATG4B-223ENST00000493618 TSPAN13O95857 204 aa8.68□□□□□ -1.02
ATG4B-223ENST00000493618 ZNF22P17026 224 aaPredicted RBP8.68□□□□□ -1.02
ATG4B-223ENST00000493618 C18orf32Q8TCD1 76 aa8.68□□□□□ -1.02
ATG4B-223ENST00000493618 TRAPPC1Q9Y5R8 145 aa8.68□□□□□ -1.02
ATG4B-223ENST00000493618 IGLV5-37A0A075B6J1 123 aa8.67□□□□□ -1.02
ATG4B-223ENST00000493618 ANAPC11Q9NYG5 84 aa8.67□□□□□ -1.02
ATG4B-223ENST00000493618 IGKV2-28A0A075B6P5 120 aa8.66□□□□□ -1.02
ATG4B-223ENST00000493618 IGKV2D-28P01615 120 aa8.66□□□□□ -1.02
ATG4B-223ENST00000493618 LINC00614P0C842 121 aa8.66□□□□□ -1.02
ATG4B-223ENST00000493618 ZNF625Q96I27 306 aaPredicted RBP8.66□□□□□ -1.02
ATG4B-223ENST00000493618 IGLV5-39A0A0G2JS06 123 aa8.65□□□□□ -1.02
ATG4B-223ENST00000493618 HBDP02042 147 aa8.65□□□□□ -1.02
ATG4B-223ENST00000493618 UBE2AP49459 152 aa8.65□□□□□ -1.02
ATG4B-223ENST00000493618 ERG28Q9UKR5 140 aa8.64□□□□□ -1.03
ATG4B-223ENST00000493618 C11orf86A6NJI1 115 aa8.63□□□□□ -1.03
ATG4B-223ENST00000493618 BAGE3Q86Y29 109 aa8.63□□□□□ -1.03
ATG4B-223ENST00000493618 KRTAP13-1Q8IUC0 172 aa8.63□□□□□ -1.03
ATG4B-223ENST00000493618 TYMSOSQ8TAI1 123 aa8.63□□□□□ -1.03
ATG4B-223ENST00000493618 SND1-IT1Q9HBX3 110 aa8.63□□□□□ -1.03
ATG4B-223ENST00000493618 APOC3P02656 99 aa8.62□□□□□ -1.03
ATG4B-223ENST00000493618 CRYGAP11844 174 aa8.62□□□□□ -1.03
ATG4B-223ENST00000493618 VPREB1P12018 145 aa8.62□□□□□ -1.03
ATG4B-223ENST00000493618 TMEM170BQ5T4T1 132 aa8.62□□□□□ -1.03
ATG4B-223ENST00000493618 TMEM238C9JI98 176 aa8.61□□□□□ -1.03
ATG4B-223ENST00000493618 PRLHP81277 87 aa8.61□□□□□ -1.03
ATG4B-223ENST00000493618 Q8NDZ9 215 aa8.61□□□□□ -1.03
ATG4B-223ENST00000493618 KRTAP13-2Q52LG2 175 aa8.6□□□□□ -1.03
ATG4B-223ENST00000493618 FAM19A1Q7Z5A9 133 aa8.59□□□□□ -1.03
ATG4B-223ENST00000493618 CHTOPQ9Y3Y2 248 aaKnown RBP8.59□□□□□ -1.03
ATG4B-223ENST00000493618 A0A0U1RRA0 63 aa8.58□□□□□ -1.04
ATG4B-223ENST00000493618 TMEM126AQ9H061 195 aa8.58□□□□□ -1.04
ATG4B-223ENST00000493618 SNAPINO95295 136 aa8.57□□□□□ -1.04
ATG4B-223ENST00000493618 RPL24P83731 157 aaKnown RBP8.57□□□□□ -1.04
ATG4B-223ENST00000493618 COX17Q14061 63 aa8.57□□□□□ -1.04
ATG4B-223ENST00000493618 M0R378 163 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms