RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 GEMIN7Q9H840 131 aaKnown RBP11.05□□□□□ -0.64
PTPRU-207ENST00000492954 LINC01546A6NGU7 62 aa11.04□□□□□ -0.64
PTPRU-207ENST00000492954 CKS1BP61024 79 aa11.04□□□□□ -0.64
PTPRU-207ENST00000492954 RHEBQ15382 184 aa11.04□□□□□ -0.64
PTPRU-207ENST00000492954 C6orf226Q5I0X4 101 aa11.04□□□□□ -0.64
PTPRU-207ENST00000492954 Q8IZM0 81 aa11.04□□□□□ -0.64
PTPRU-207ENST00000492954 MRPL18Q9H0U6 180 aaKnown RBP11.04□□□□□ -0.64
PTPRU-207ENST00000492954 RPS10P5Q9NQ39 176 aa11.04□□□□□ -0.64
PTPRU-207ENST00000492954 CARHSP1Q9Y2V2 147 aaKnown RBP11.04□□□□□ -0.64
PTPRU-207ENST00000492954 M0QXV9 152 aa11.03□□□□□ -0.64
PTPRU-207ENST00000492954 KRTAP10-8P60410 259 aa11.03□□□□□ -0.64
PTPRU-207ENST00000492954 COX19Q49B96 90 aa11.03□□□□□ -0.64
PTPRU-207ENST00000492954 C9orf129Q5T035 196 aaKnown RBP11.03□□□□□ -0.64
PTPRU-207ENST00000492954 FABP9Q0Z7S8 132 aa11.02□□□□□ -0.65
PTPRU-207ENST00000492954 FA2HQ7L5A8 372 aa11.01□□□□□ -0.65
PTPRU-207ENST00000492954 LINC00469Q8N7U9 141 aa11.01□□□□□ -0.65
PTPRU-207ENST00000492954 IGLV7-43P04211 117 aa11□□□□□ -0.65
PTPRU-207ENST00000492954 TINCRA0A1B0GVN0 87 aa10.99□□□□□ -0.65
PTPRU-207ENST00000492954 LINC01549A6NIU2 74 aa10.99□□□□□ -0.65
PTPRU-207ENST00000492954 SMIM1B2RUZ4 78 aa10.99□□□□□ -0.65
PTPRU-207ENST00000492954 CST9LQ9H4G1 147 aa10.99□□□□□ -0.65
PTPRU-207ENST00000492954 SMCO4Q9NRQ5 59 aa10.99□□□□□ -0.65
PTPRU-207ENST00000492954 F8VRH5 84 aa10.98□□□□□ -0.65
PTPRU-207ENST00000492954 UBE2BP63146 152 aa10.98□□□□□ -0.65
PTPRU-207ENST00000492954 XAGE1AQ9HD64 81 aa10.97□□□□□ -0.65
PTPRU-207ENST00000492954 IGLV5-45A0A087WSX0 123 aa10.96□□□□□ -0.65
PTPRU-207ENST00000492954 PMVKQ15126 192 aa10.96□□□□□ -0.65
PTPRU-207ENST00000492954 DIRC1Q969H9 104 aa10.96□□□□□ -0.65
PTPRU-207ENST00000492954 CXCL5P42830 114 aa10.95□□□□□ -0.66
PTPRU-207ENST00000492954 PDZD11Q5EBL8 140 aa10.95□□□□□ -0.66
PTPRU-207ENST00000492954 COX7B2Q8TF08 81 aa10.95□□□□□ -0.66
PTPRU-207ENST00000492954 TRAPPC1Q9Y5R8 145 aa10.95□□□□□ -0.66
PTPRU-207ENST00000492954 UBR4Q5T4S7 5183 aa10.95□□□□□ -0.66
PTPRU-207ENST00000492954 SPINK8P0C7L1 97 aa10.94□□□□□ -0.66
PTPRU-207ENST00000492954 URB1-AS1Q96HZ7 61 aa10.94□□□□□ -0.66
PTPRU-207ENST00000492954 A0A096LNJ9 63 aa10.93□□□□□ -0.66
PTPRU-207ENST00000492954 H0Y9J4 135 aa10.93□□□□□ -0.66
PTPRU-207ENST00000492954 APOC3P02656 99 aa10.93□□□□□ -0.66
PTPRU-207ENST00000492954 C18orf32Q8TCD1 76 aa10.93□□□□□ -0.66
PTPRU-207ENST00000492954 C22orf24Q9Y442 160 aa10.92□□□□□ -0.66
PTPRU-207ENST00000492954 LRP2P98164 4655 aa10.91□□□□□ -0.66
PTPRU-207ENST00000492954 LINC00614P0C842 121 aa10.9□□□□□ -0.66
PTPRU-207ENST00000492954 PMCHL1Q16048 86 aa10.9□□□□□ -0.66
PTPRU-207ENST00000492954 SNAPINO95295 136 aa10.89□□□□□ -0.67
PTPRU-207ENST00000492954 IGLC3P0DOY3 106 aa10.89□□□□□ -0.67
PTPRU-207ENST00000492954 NDUFA6P56556 154 aa10.89□□□□□ -0.67
PTPRU-207ENST00000492954 PRR26Q8N8Z3 221 aa10.89□□□□□ -0.67
PTPRU-207ENST00000492954 H3BRM9 83 aa10.88□□□□□ -0.67
PTPRU-207ENST00000492954 HBDP02042 147 aa10.88□□□□□ -0.67
PTPRU-207ENST00000492954 NDUFA5Q16718 116 aa10.88□□□□□ -0.67
PTPRU-207ENST00000492954 LBHQ53QV2 105 aaPredicted RBP10.88□□□□□ -0.67
PTPRU-207ENST00000492954 SVBPQ8N300 66 aa10.88□□□□□ -0.67
PTPRU-207ENST00000492954 RAB5BP61020 215 aa10.87□□□□□ -0.67
PTPRU-207ENST00000492954 KRTAP1-4P0C5Y4 121 aa10.86□□□□□ -0.67
PTPRU-207ENST00000492954 MRPL55Q7Z7F7 128 aaKnown RBP10.86□□□□□ -0.67
PTPRU-207ENST00000492954 TP73-AS1Q9UF72 201 aa10.86□□□□□ -0.67
PTPRU-207ENST00000492954 IGLV5-39A0A0G2JS06 123 aa10.85□□□□□ -0.67
PTPRU-207ENST00000492954 ZNF22P17026 224 aaPredicted RBP10.85□□□□□ -0.67
PTPRU-207ENST00000492954 NUPR1O60356 82 aa10.84□□□□□ -0.67
PTPRU-207ENST00000492954 ZNF861PO60384 105 aa10.83□□□□□ -0.68
PTPRU-207ENST00000492954 ATP5LO75964 103 aa10.83□□□□□ -0.68
PTPRU-207ENST00000492954 YPEL4Q96NS1 127 aa10.83□□□□□ -0.68
PTPRU-207ENST00000492954 BAGE3Q86Y29 109 aa10.82□□□□□ -0.68
PTPRU-207ENST00000492954 LINC00167Q96N53 147 aa10.82□□□□□ -0.68
PTPRU-207ENST00000492954 IGLV1-50A0A075B6I6 118 aa10.81□□□□□ -0.68
PTPRU-207ENST00000492954 C11orf86A6NJI1 115 aa10.81□□□□□ -0.68
PTPRU-207ENST00000492954 RPL37AP8A6NKH3 93 aa10.81□□□□□ -0.68
PTPRU-207ENST00000492954 GAGE10A6NGK3 116 aa10.8□□□□□ -0.68
PTPRU-207ENST00000492954 BCE1O60756 84 aa10.8□□□□□ -0.68
PTPRU-207ENST00000492954 PFN2P35080 140 aa10.8□□□□□ -0.68
PTPRU-207ENST00000492954 IGLV5-37A0A075B6J1 123 aa10.79□□□□□ -0.68
PTPRU-207ENST00000492954 TMEM170BQ5T4T1 132 aa10.78□□□□□ -0.68
PTPRU-207ENST00000492954 NKAPP1Q8N9T2 125 aa10.78□□□□□ -0.68
PTPRU-207ENST00000492954 SCO1O75880 301 aa10.77□□□□□ -0.69
PTPRU-207ENST00000492954 ZNF625Q96I27 306 aaPredicted RBP10.77□□□□□ -0.69
PTPRU-207ENST00000492954 ERG28Q9UKR5 140 aa10.77□□□□□ -0.69
PTPRU-207ENST00000492954 CHTOPQ9Y3Y2 248 aaKnown RBP10.77□□□□□ -0.69
PTPRU-207ENST00000492954 RPL28P46779 137 aaKnown RBP10.76□□□□□ -0.69
PTPRU-207ENST00000492954 CBLN2Q8IUK8 224 aa10.76□□□□□ -0.69
PTPRU-207ENST00000492954 CHCHD1Q96BP2 118 aaKnown RBP10.76□□□□□ -0.69
PTPRU-207ENST00000492954 SND1-IT1Q9HBX3 110 aa10.75□□□□□ -0.69
PTPRU-207ENST00000492954 RPL13AP40429 203 aaKnown RBP10.74□□□□□ -0.69
PTPRU-207ENST00000492954 IFI27L1Q96BM0 104 aa10.74□□□□□ -0.69
PTPRU-207ENST00000492954 VPREB1P12018 145 aa10.73□□□□□ -0.69
PTPRU-207ENST00000492954 IGKV2-28A0A075B6P5 120 aa10.72□□□□□ -0.69
PTPRU-207ENST00000492954 TRAV12-1A0A0B4J245 112 aa10.72□□□□□ -0.69
PTPRU-207ENST00000492954 IGKV2D-28P01615 120 aa10.72□□□□□ -0.69
PTPRU-207ENST00000492954 COX17Q14061 63 aa10.72□□□□□ -0.69
PTPRU-207ENST00000492954 SFTA2Q6UW10 78 aa10.71□□□□□ -0.69
PTPRU-207ENST00000492954 TMEM223A0PJW6 202 aa10.7□□□□□ -0.7
PTPRU-207ENST00000492954 KRTAP13-1Q8IUC0 172 aa10.7□□□□□ -0.7
PTPRU-207ENST00000492954 FAM19A2Q8N3H0 131 aa10.7□□□□□ -0.7
PTPRU-207ENST00000492954 Q8NDZ9 215 aa10.7□□□□□ -0.7
PTPRU-207ENST00000492954 HSBP1O75506 76 aa10.69□□□□□ -0.7
PTPRU-207ENST00000492954 UBE2AP49459 152 aa10.69□□□□□ -0.7
PTPRU-207ENST00000492954 LPAP08519 4548 aa10.68□□□□□ -0.7
PTPRU-207ENST00000492954 A0A087X002 238 aa10.68□□□□□ -0.7
PTPRU-207ENST00000492954 RPL24P83731 157 aaKnown RBP10.68□□□□□ -0.7
PTPRU-207ENST00000492954 TRGC2P03986 189 aa10.67□□□□□ -0.7
PTPRU-207ENST00000492954 A0A0U1RRA0 63 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms