RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 TRAV13-1A0A0B4J241 112 aa15.86■□□□□ 0.13
USF3-203ENST00000491165 LYRM9A8MSI8 78 aa15.86■□□□□ 0.13
USF3-203ENST00000491165 GAGE12JA6NER3 117 aa15.85■□□□□ 0.13
USF3-203ENST00000491165 GAGE4Q13068 117 aa15.85■□□□□ 0.13
USF3-203ENST00000491165 GAGE5Q13069 117 aa15.85■□□□□ 0.13
USF3-203ENST00000491165 COPS9Q8WXC6 57 aa15.85■□□□□ 0.13
USF3-203ENST00000491165 ZNF625Q96I27 306 aaPredicted RBP15.85■□□□□ 0.13
USF3-203ENST00000491165 CDC42SE2Q9NRR3 84 aa15.85■□□□□ 0.13
USF3-203ENST00000491165 TRGV2A0A075B6R0 118 aa15.84■□□□□ 0.13
USF3-203ENST00000491165 SPART-AS1P0CW21 52 aa15.84■□□□□ 0.13
USF3-203ENST00000491165 NHLRC4P0CG21 123 aaPredicted RBP15.83■□□□□ 0.13
USF3-203ENST00000491165 TRAV8-4A0A0B4J246 113 aa15.83■□□□□ 0.12
USF3-203ENST00000491165 DNAH7Q8WXX0 4024 aa15.83■□□□□ 0.12
USF3-203ENST00000491165 A0A0U1RRA0 63 aa15.81■□□□□ 0.12
USF3-203ENST00000491165 F5H768 121 aa15.8■□□□□ 0.12
USF3-203ENST00000491165 UBE2L6O14933 153 aa15.8■□□□□ 0.12
USF3-203ENST00000491165 NANOS2P60321 138 aaKnown RBP15.8■□□□□ 0.12
USF3-203ENST00000491165 DAD1P61803 113 aa15.8■□□□□ 0.12
USF3-203ENST00000491165 TMEM243Q9BU79 118 aa15.8■□□□□ 0.12
USF3-203ENST00000491165 MEIG1Q5JSS6 88 aa15.8■□□□□ 0.12
USF3-203ENST00000491165 SNCGO76070 127 aa15.79■□□□□ 0.12
USF3-203ENST00000491165 Q6ZTC4 211 aa15.79■□□□□ 0.12
USF3-203ENST00000491165 HERV-K104P63124 156 aa15.79■□□□□ 0.12
USF3-203ENST00000491165 SOSTDC1Q6X4U4 206 aa15.78■□□□□ 0.12
USF3-203ENST00000491165 C11orf45Q8TAV5 145 aa15.77■□□□□ 0.12
USF3-203ENST00000491165 FHL2Q14192 279 aa15.76■□□□□ 0.11
USF3-203ENST00000491165 COX7A2LO14548 114 aa15.74■□□□□ 0.11
USF3-203ENST00000491165 TRBV6-4A0A1B0GX49 114 aa15.74■□□□□ 0.11
USF3-203ENST00000491165 GAGE2BQ13066 116 aa15.74■□□□□ 0.11
USF3-203ENST00000491165 GAGE2EQ4V326 116 aa15.74■□□□□ 0.11
USF3-203ENST00000491165 GAGE2DQ9UEU5 116 aa15.74■□□□□ 0.11
USF3-203ENST00000491165 LYSTQ99698 3801 aa15.73■□□□□ 0.11
USF3-203ENST00000491165 HTN3P15516 51 aa15.73■□□□□ 0.11
USF3-203ENST00000491165 ANAPC13Q9BS18 74 aa15.73■□□□□ 0.11
USF3-203ENST00000491165 PPDPFQ9H3Y8 114 aa15.73■□□□□ 0.11
USF3-203ENST00000491165 LOC100131303A0A0U1RQF7 123 aa15.72■□□□□ 0.11
USF3-203ENST00000491165 TRAV26-1A0A087WT03 109 aa15.71■□□□□ 0.11
USF3-203ENST00000491165 ATP5G1P05496 136 aa15.71■□□□□ 0.11
USF3-203ENST00000491165 STARD9Q9P2P6 4700 aa15.71■□□□□ 0.11
USF3-203ENST00000491165 TRGV4A0A0C4DH28 118 aa15.71■□□□□ 0.11
USF3-203ENST00000491165 FAM240AA0A1B0GVK7 77 aa15.7■□□□□ 0.1
USF3-203ENST00000491165 C15orf53Q8NAA6 179 aa15.7■□□□□ 0.1
USF3-203ENST00000491165 Q6Q795 121 aa15.68■□□□□ 0.1
USF3-203ENST00000491165 DYNC2H1Q8NCM8 4307 aaKnown RBP15.68■□□□□ 0.1
USF3-203ENST00000491165 GAGE6Q13070 117 aa15.67■□□□□ 0.1
USF3-203ENST00000491165 COX7B2Q8TF08 81 aa15.67■□□□□ 0.1
USF3-203ENST00000491165 MRPL23Q16540 153 aaKnown RBP15.67■□□□□ 0.1
USF3-203ENST00000491165 DEFB131BA0A096LNP1 70 aa15.65■□□□□ 0.1
USF3-203ENST00000491165 TRBV6-8A0A0A6YYG3 113 aa15.64■□□□□ 0.09
USF3-203ENST00000491165 TRACP01848 142 aa15.64■□□□□ 0.09
USF3-203ENST00000491165 PLECQ15149 4684 aaKnown RBP15.64■□□□□ 0.09
USF3-203ENST00000491165 PRO0255Q9UI72 69 aa15.64■□□□□ 0.09
USF3-203ENST00000491165 TRAV13-2A0A0B4J235 113 aa15.63■□□□□ 0.09
USF3-203ENST00000491165 IGKV3OR2-268A0A0C4DH90 116 aa15.63■□□□□ 0.09
USF3-203ENST00000491165 NDUFV3P56181 108 aaKnown RBP15.63■□□□□ 0.09
USF3-203ENST00000491165 TOMM7Q9P0U1 55 aa15.63■□□□□ 0.09
USF3-203ENST00000491165 IGLV4-60A0A075B6I1 120 aa15.62■□□□□ 0.09
USF3-203ENST00000491165 TTC32Q5I0X7 151 aa15.62■□□□□ 0.09
USF3-203ENST00000491165 CHCHD5Q9BSY4 110 aa15.62■□□□□ 0.09
USF3-203ENST00000491165 MIR7-3HGQ8N6C7 128 aa15.61■□□□□ 0.09
USF3-203ENST00000491165 CRPP02741 224 aa15.61■□□□□ 0.09
USF3-203ENST00000491165 TENM2Q9NT68 2774 aa15.6■□□□□ 0.09
USF3-203ENST00000491165 PAX4O43316 350 aa15.6■□□□□ 0.09
USF3-203ENST00000491165 TRAV10A0A0B4J240 114 aa15.59■□□□□ 0.09
USF3-203ENST00000491165 IGHV3OR16-9A0A0B4J2B5 98 aa15.59■□□□□ 0.09
USF3-203ENST00000491165 GYPEP15421 78 aa15.59■□□□□ 0.09
USF3-203ENST00000491165 SND1-IT1Q9HBX3 110 aa15.58■□□□□ 0.08
USF3-203ENST00000491165 ACYP1P07311 99 aa15.58■□□□□ 0.08
USF3-203ENST00000491165 RPL28P46779 137 aaKnown RBP15.58■□□□□ 0.08
USF3-203ENST00000491165 FAM218AQ96MZ4 157 aa15.58■□□□□ 0.08
USF3-203ENST00000491165 A0A096LPF7 62 aa15.56■□□□□ 0.08
USF3-203ENST00000491165 BAALC-AS2P0C853 105 aa15.56■□□□□ 0.08
USF3-203ENST00000491165 LINC00158P58513 81 aa15.56■□□□□ 0.08
USF3-203ENST00000491165 LINC00337Q8N6G1 96 aa15.56■□□□□ 0.08
USF3-203ENST00000491165 A0A087WZ39 114 aa15.56■□□□□ 0.08
USF3-203ENST00000491165 IGKV2-28A0A075B6P5 120 aa15.55■□□□□ 0.08
USF3-203ENST00000491165 IGKV2D-28P01615 120 aa15.55■□□□□ 0.08
USF3-203ENST00000491165 IBA57-AS1B1ANH7 110 aa15.54■□□□□ 0.08
USF3-203ENST00000491165 C5orf38Q86SI9 138 aa15.52■□□□□ 0.08
USF3-203ENST00000491165 CCL18P55774 89 aa15.52■□□□□ 0.07
USF3-203ENST00000491165 LINC00959A0A1B0GUT2 108 aa15.51■□□□□ 0.07
USF3-203ENST00000491165 TRBV7-7A0A0K0K1E9 115 aa15.5■□□□□ 0.07
USF3-203ENST00000491165 C22orf24Q9Y442 160 aa15.5■□□□□ 0.07
USF3-203ENST00000491165 H3BNG1 76 aa15.49■□□□□ 0.07
USF3-203ENST00000491165 SMIM11BQ8TCY0 68 aa15.49■□□□□ 0.07
USF3-203ENST00000491165 Q9HAA7 133 aa15.49■□□□□ 0.07
USF3-203ENST00000491165 PFN2P35080 140 aa15.48■□□□□ 0.07
USF3-203ENST00000491165 INAFM2P0DMQ5 153 aa15.47■□□□□ 0.07
USF3-203ENST00000491165 MALP21145 153 aa15.47■□□□□ 0.07
USF3-203ENST00000491165 WWC2-AS2Q96NR7 200 aa15.46■□□□□ 0.07
USF3-203ENST00000491165 DNAH1Q9P2D7 4330 aa15.45■□□□□ 0.06
USF3-203ENST00000491165 DNAL4O96015 105 aa15.45■□□□□ 0.06
USF3-203ENST00000491165 C6orf226Q5I0X4 101 aa15.45■□□□□ 0.06
USF3-203ENST00000491165 H0YGX0 51 aa15.44■□□□□ 0.06
USF3-203ENST00000491165 SS18Q15532 418 aa15.44■□□□□ 0.06
USF3-203ENST00000491165 MUC7Q8TAX7 377 aa15.44■□□□□ 0.06
USF3-203ENST00000491165 A0A1B0GUV1 79 aa15.44■□□□□ 0.06
USF3-203ENST00000491165 B5MCH6 92 aa15.44■□□□□ 0.06
USF3-203ENST00000491165 XCL1P47992 114 aa15.44■□□□□ 0.06
USF3-203ENST00000491165 A0A087WYN8 130 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms