RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 TMEM218A2RU14 115 aa8.09□□□□□ -1.11
VARS-227ENST00000489979 C6orf226Q5I0X4 101 aa8.09□□□□□ -1.11
VARS-227ENST00000489979 ZC2HC1BQ5TFG8 222 aa8.09□□□□□ -1.11
VARS-227ENST00000489979 Q6ZN92 141 aa8.09□□□□□ -1.11
VARS-227ENST00000489979 TEX43Q6ZNM6 134 aa8.09□□□□□ -1.11
VARS-227ENST00000489979 RPL37AP8A6NKH3 93 aa8.08□□□□□ -1.12
VARS-227ENST00000489979 RAB5AP20339 215 aa8.08□□□□□ -1.12
VARS-227ENST00000489979 LINC00173Q6ZV60 143 aa8.08□□□□□ -1.12
VARS-227ENST00000489979 MRPL54Q6P161 138 aaKnown RBP8.07□□□□□ -1.12
VARS-227ENST00000489979 Q8IZM0 81 aa8.07□□□□□ -1.12
VARS-227ENST00000489979 LINC00167Q96N53 147 aa8.07□□□□□ -1.12
VARS-227ENST00000489979 C2orf88Q9BSF0 95 aa8.07□□□□□ -1.12
VARS-227ENST00000489979 SEC11CQ9BY50 192 aa8.07□□□□□ -1.12
VARS-227ENST00000489979 PPBPP02775 128 aa8.06□□□□□ -1.12
VARS-227ENST00000489979 NDUFA5Q16718 116 aa8.06□□□□□ -1.12
VARS-227ENST00000489979 ALKBH7Q9BT30 221 aaPredicted RBP8.06□□□□□ -1.12
VARS-227ENST00000489979 FAM229BQ4G0N7 80 aa8.05□□□□□ -1.12
VARS-227ENST00000489979 ATP5L2Q7Z4Y8 100 aa8.05□□□□□ -1.12
VARS-227ENST00000489979 KRTAP13-1Q8IUC0 172 aa8.05□□□□□ -1.12
VARS-227ENST00000489979 SLC7A5P1Q8MH63 180 aa8.05□□□□□ -1.12
VARS-227ENST00000489979 GAGE10A6NGK3 116 aa8.04□□□□□ -1.12
VARS-227ENST00000489979 S100PP25815 95 aa8.04□□□□□ -1.12
VARS-227ENST00000489979 UBE2AP49459 152 aa8.04□□□□□ -1.12
VARS-227ENST00000489979 ORMDL3Q8N138 153 aa8.04□□□□□ -1.12
VARS-227ENST00000489979 AMELXQ99217 191 aa8.04□□□□□ -1.12
VARS-227ENST00000489979 IGKV2D-26A0A0A0MRZ7 120 aa8.03□□□□□ -1.12
VARS-227ENST00000489979 A0A1B0GXF2 115 aa8.03□□□□□ -1.12
VARS-227ENST00000489979 F8VRH5 84 aa8.03□□□□□ -1.12
VARS-227ENST00000489979 ADCYAP1P18509 176 aa8.03□□□□□ -1.12
VARS-227ENST00000489979 LCE2DQ5TA82 110 aaPredicted RBP8.03□□□□□ -1.12
VARS-227ENST00000489979 TMEM136Q6ZRR5 245 aa8.03□□□□□ -1.12
VARS-227ENST00000489979 PRELID3AQ96N28 172 aa8.03□□□□□ -1.12
VARS-227ENST00000489979 VCX2Q9H322 139 aa8.03□□□□□ -1.12
VARS-227ENST00000489979 PPDPFQ9H3Y8 114 aa8.03□□□□□ -1.12
VARS-227ENST00000489979 LOC389332A0A1B0GUA5 103 aa8.02□□□□□ -1.13
VARS-227ENST00000489979 C2orf66Q6UXQ4 117 aa8.02□□□□□ -1.13
VARS-227ENST00000489979 RHEBQ15382 184 aa8.01□□□□□ -1.13
VARS-227ENST00000489979 FAM19A3Q7Z5A8 133 aa8.01□□□□□ -1.13
VARS-227ENST00000489979 CDKN2A-AS1Q9UH64 79 aa8.01□□□□□ -1.13
VARS-227ENST00000489979 CYSLTR1Q9Y271 337 aa8.01□□□□□ -1.13
VARS-227ENST00000489979 CTAG1AP78358 180 aa8□□□□□ -1.13
VARS-227ENST00000489979 CRCT1Q9UGL9 99 aa8□□□□□ -1.13
VARS-227ENST00000489979 FSIP2Q5CZC0 6907 aa8□□□□□ -1.13
VARS-227ENST00000489979 TRAV9-1A0A075B6T8 112 aa7.99□□□□□ -1.13
VARS-227ENST00000489979 PRSS47A8MTI9 375 aa7.99□□□□□ -1.13
VARS-227ENST00000489979 LINC01547P58512 204 aaPredicted RBP7.99□□□□□ -1.13
VARS-227ENST00000489979 HERVK_113P63121 156 aa7.99□□□□□ -1.13
VARS-227ENST00000489979 RPS10P5Q9NQ39 176 aa7.99□□□□□ -1.13
VARS-227ENST00000489979 IGLV5-37A0A075B6J1 123 aa7.98□□□□□ -1.13
VARS-227ENST00000489979 SNAPINO95295 136 aa7.98□□□□□ -1.13
VARS-227ENST00000489979 CXCL5P42830 114 aa7.98□□□□□ -1.13
VARS-227ENST00000489979 C10orf91Q5T1B1 145 aa7.98□□□□□ -1.13
VARS-227ENST00000489979 SVBPQ8N300 66 aa7.98□□□□□ -1.13
VARS-227ENST00000489979 NKAPP1Q8N9T2 125 aa7.98□□□□□ -1.13
VARS-227ENST00000489979 MAP1LC3AQ9H492 121 aa7.98□□□□□ -1.13
VARS-227ENST00000489979 IGKV2-28A0A075B6P5 120 aa7.97□□□□□ -1.13
VARS-227ENST00000489979 IGIPA6NJ69 53 aa7.97□□□□□ -1.13
VARS-227ENST00000489979 SCO1O75880 301 aa7.97□□□□□ -1.13
VARS-227ENST00000489979 IGKV2D-28P01615 120 aa7.97□□□□□ -1.13
VARS-227ENST00000489979 APOC3P02656 99 aa7.97□□□□□ -1.13
VARS-227ENST00000489979 NPSP0C0P6 89 aa7.97□□□□□ -1.13
VARS-227ENST00000489979 SEC11AP67812 179 aa7.97□□□□□ -1.13
VARS-227ENST00000489979 PRLHP81277 87 aa7.97□□□□□ -1.13
VARS-227ENST00000489979 COX19Q49B96 90 aa7.97□□□□□ -1.13
VARS-227ENST00000489979 Q8N8P6 123 aa7.97□□□□□ -1.13
VARS-227ENST00000489979 GEMIN7Q9H840 131 aaKnown RBP7.97□□□□□ -1.13
VARS-227ENST00000489979 C3orf22Q8N5N4 141 aa7.96□□□□□ -1.14
VARS-227ENST00000489979 LAMTOR2Q9Y2Q5 125 aa7.96□□□□□ -1.14
VARS-227ENST00000489979 RAB5BP61020 215 aa7.95□□□□□ -1.14
VARS-227ENST00000489979 ORMDL2Q53FV1 153 aa7.95□□□□□ -1.14
VARS-227ENST00000489979 LINC00337Q8N6G1 96 aa7.95□□□□□ -1.14
VARS-227ENST00000489979 SMIM1B2RUZ4 78 aa7.94□□□□□ -1.14
VARS-227ENST00000489979 ASB16-AS1Q495Z4 193 aa7.94□□□□□ -1.14
VARS-227ENST00000489979 FAM19A1Q7Z5A9 133 aa7.94□□□□□ -1.14
VARS-227ENST00000489979 COX7B2Q8TF08 81 aa7.94□□□□□ -1.14
VARS-227ENST00000489979 KRTAP4-1Q9BYQ7 146 aa7.94□□□□□ -1.14
VARS-227ENST00000489979 PDZD11Q5EBL8 140 aa7.93□□□□□ -1.14
VARS-227ENST00000489979 PAPPA-AS1Q5QFB9 102 aa7.93□□□□□ -1.14
VARS-227ENST00000489979 FP248Q71RG6 208 aaPredicted RBP7.93□□□□□ -1.14
VARS-227ENST00000489979 TMEM238C9JI98 176 aa7.92□□□□□ -1.14
VARS-227ENST00000489979 KRTAP13-3Q3SY46 172 aa7.92□□□□□ -1.14
VARS-227ENST00000489979 SPAG11AQ6PDA7 123 aa7.92□□□□□ -1.14
VARS-227ENST00000489979 PLEKHB2Q96CS7 222 aa7.92□□□□□ -1.14
VARS-227ENST00000489979 TIMM17AQ99595 171 aa7.91□□□□□ -1.14
VARS-227ENST00000489979 GNB1LQ9BYB4 327 aa7.91□□□□□ -1.14
VARS-227ENST00000489979 TMEM126AQ9H061 195 aa7.91□□□□□ -1.14
VARS-227ENST00000489979 K7EMI3 77 aa7.9□□□□□ -1.14
VARS-227ENST00000489979 ATP6V1G1O75348 118 aa7.89□□□□□ -1.15
VARS-227ENST00000489979 CBLN2Q8IUK8 224 aa7.89□□□□□ -1.15
VARS-227ENST00000489979 IGLV5-45A0A087WSX0 123 aa7.88□□□□□ -1.15
VARS-227ENST00000489979 TINCRA0A1B0GVN0 87 aa7.88□□□□□ -1.15
VARS-227ENST00000489979 M0R378 163 aa7.88□□□□□ -1.15
VARS-227ENST00000489979 SPINK8P0C7L1 97 aa7.88□□□□□ -1.15
VARS-227ENST00000489979 G0S2P27469 103 aa7.88□□□□□ -1.15
VARS-227ENST00000489979 C4orf48Q5BLP8 95 aa7.88□□□□□ -1.15
VARS-227ENST00000489979 TOMM6Q96B49 74 aa7.88□□□□□ -1.15
VARS-227ENST00000489979 NXT2Q9NPJ8 142 aaKnown RBP7.88□□□□□ -1.15
VARS-227ENST00000489979 VPREB1P12018 145 aa7.87□□□□□ -1.15
VARS-227ENST00000489979 PFN2P35080 140 aa7.87□□□□□ -1.15
VARS-227ENST00000489979 SEC61BP60468 96 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms