RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 CKS1BP61024 79 aa7.05□□□□□ -1.28
CPSF7-212ENST00000489728 HAMPP81172 84 aa7.05□□□□□ -1.28
CPSF7-212ENST00000489728 C6orf226Q5I0X4 101 aa7.05□□□□□ -1.28
CPSF7-212ENST00000489728 FAM19A2Q8N3H0 131 aa7.05□□□□□ -1.28
CPSF7-212ENST00000489728 A0A087WYN8 130 aa7.04□□□□□ -1.28
CPSF7-212ENST00000489728 PLA2G1BP04054 148 aaKnown RBP7.04□□□□□ -1.28
CPSF7-212ENST00000489728 CHTF8P0CG12 524 aa7.04□□□□□ -1.28
CPSF7-212ENST00000489728 Q5VSD8 79 aa7.04□□□□□ -1.28
CPSF7-212ENST00000489728 UNQ6190/PRO20217Q6UXQ8 127 aa7.04□□□□□ -1.28
CPSF7-212ENST00000489728 LINC00528Q8N1L1 170 aa7.04□□□□□ -1.28
CPSF7-212ENST00000489728 C6orf48Q9UBA6 75 aa7.04□□□□□ -1.28
CPSF7-212ENST00000489728 CHTOPQ9Y3Y2 248 aaKnown RBP7.04□□□□□ -1.28
CPSF7-212ENST00000489728 IGKV2-24A0A0C4DH68 120 aa7.03□□□□□ -1.28
CPSF7-212ENST00000489728 IGLV5-39A0A0G2JS06 123 aa7.03□□□□□ -1.28
CPSF7-212ENST00000489728 F8VRH5 84 aa7.03□□□□□ -1.28
CPSF7-212ENST00000489728 SMR3BP02814 79 aaPredicted RBP7.03□□□□□ -1.28
CPSF7-212ENST00000489728 ZNF22P17026 224 aaPredicted RBP7.03□□□□□ -1.28
CPSF7-212ENST00000489728 MAJINQ3KP22 176 aa7.03□□□□□ -1.28
CPSF7-212ENST00000489728 C10orf25Q5T742 122 aa7.03□□□□□ -1.28
CPSF7-212ENST00000489728 SFTA2Q6UW10 78 aa7.03□□□□□ -1.28
CPSF7-212ENST00000489728 COX7B2Q8TF08 81 aa7.03□□□□□ -1.28
CPSF7-212ENST00000489728 DPH3Q96FX2 82 aa7.03□□□□□ -1.28
CPSF7-212ENST00000489728 KRTAP17-1Q9BYP8 105 aa7.03□□□□□ -1.28
CPSF7-212ENST00000489728 TOMM7Q9P0U1 55 aa7.03□□□□□ -1.28
CPSF7-212ENST00000489728 C11orf86A6NJI1 115 aa7.02□□□□□ -1.29
CPSF7-212ENST00000489728 NDUFC2-KCTD14E9PQ53 114 aa7.02□□□□□ -1.29
CPSF7-212ENST00000489728 COA6Q5JTJ3 125 aaKnown RBP7.02□□□□□ -1.29
CPSF7-212ENST00000489728 NUPR1O60356 82 aa7.01□□□□□ -1.29
CPSF7-212ENST00000489728 SPINK8P0C7L1 97 aa7.01□□□□□ -1.29
CPSF7-212ENST00000489728 RPL18AQ02543 176 aaKnown RBP7.01□□□□□ -1.29
CPSF7-212ENST00000489728 C2orf82Q6UX34 121 aa7.01□□□□□ -1.29
CPSF7-212ENST00000489728 STPG4Q8N801 248 aa7.01□□□□□ -1.29
CPSF7-212ENST00000489728 PLNP26678 52 aa7□□□□□ -1.29
CPSF7-212ENST00000489728 GAGE2BQ13066 116 aa7□□□□□ -1.29
CPSF7-212ENST00000489728 ODF1Q14990 250 aa7□□□□□ -1.29
CPSF7-212ENST00000489728 TMEM170BQ5T4T1 132 aa7□□□□□ -1.29
CPSF7-212ENST00000489728 KRTAP4-5Q9BYR2 181 aa7□□□□□ -1.29
CPSF7-212ENST00000489728 PCLOQ9Y6V0 5065 aa6.99□□□□□ -1.29
CPSF7-212ENST00000489728 FAT1Q14517 4588 aa6.99□□□□□ -1.29
CPSF7-212ENST00000489728 Q6ZRP5 223 aa6.99□□□□□ -1.29
CPSF7-212ENST00000489728 C7orf33Q8WU49 177 aa6.99□□□□□ -1.29
CPSF7-212ENST00000489728 MAP1LC3CQ9BXW4 147 aa6.99□□□□□ -1.29
CPSF7-212ENST00000489728 TMEM223A0PJW6 202 aa6.98□□□□□ -1.29
CPSF7-212ENST00000489728 FABP4P15090 132 aa6.98□□□□□ -1.29
CPSF7-212ENST00000489728 ABCA13Q86UQ4 5058 aa6.97□□□□□ -1.29
CPSF7-212ENST00000489728 DPM2O94777 84 aa6.97□□□□□ -1.29
CPSF7-212ENST00000489728 RPL37AP61513 92 aaKnown RBP6.97□□□□□ -1.29
CPSF7-212ENST00000489728 KRTAP10-4P60372 401 aaPredicted RBP6.96□□□□□ -1.3
CPSF7-212ENST00000489728 COX17Q14061 63 aa6.96□□□□□ -1.3
CPSF7-212ENST00000489728 C9orf116Q5BN46 136 aaPredicted RBP6.96□□□□□ -1.3
CPSF7-212ENST00000489728 SRRM2Q9UQ35 2752 aaKnown RBP6.96□□□□□ -1.3
CPSF7-212ENST00000489728 H0Y8G0 127 aa6.95□□□□□ -1.3
CPSF7-212ENST00000489728 GAGE2EQ4V326 116 aa6.95□□□□□ -1.3
CPSF7-212ENST00000489728 ZNF625Q96I27 306 aaPredicted RBP6.95□□□□□ -1.3
CPSF7-212ENST00000489728 GAGE2DQ9UEU5 116 aa6.95□□□□□ -1.3
CPSF7-212ENST00000489728 VPS13BQ7Z7G8 4022 aa6.95□□□□□ -1.3
CPSF7-212ENST00000489728 A0A1W2PNN7 141 aa6.94□□□□□ -1.3
CPSF7-212ENST00000489728 SYS1-DBNDD2H3BUS1 97 aa6.94□□□□□ -1.3
CPSF7-212ENST00000489728 IGKCP01834 107 aa6.94□□□□□ -1.3
CPSF7-212ENST00000489728 INAFM2P0DMQ5 153 aa6.94□□□□□ -1.3
CPSF7-212ENST00000489728 PET117Q6UWS5 81 aa6.94□□□□□ -1.3
CPSF7-212ENST00000489728 HERVK_113P61574 105 aa6.93□□□□□ -1.3
CPSF7-212ENST00000489728 HERV-K104P63124 156 aa6.93□□□□□ -1.3
CPSF7-212ENST00000489728 C9orf129Q5T035 196 aaKnown RBP6.93□□□□□ -1.3
CPSF7-212ENST00000489728 LINC00587B1AMM8 73 aa6.92□□□□□ -1.3
CPSF7-212ENST00000489728 AKR1D1P51857 326 aa6.92□□□□□ -1.3
CPSF7-212ENST00000489728 LINC01545Q5VT33 79 aa6.92□□□□□ -1.3
CPSF7-212ENST00000489728 PLEKHB2Q96CS7 222 aa6.92□□□□□ -1.3
CPSF7-212ENST00000489728 ERG28Q9UKR5 140 aa6.92□□□□□ -1.3
CPSF7-212ENST00000489728 PLA2G2DQ9UNK4 145 aa6.92□□□□□ -1.3
CPSF7-212ENST00000489728 LEPROTO15243 131 aa6.91□□□□□ -1.3
CPSF7-212ENST00000489728 PRR3P79522 188 aaKnown RBP6.91□□□□□ -1.3
CPSF7-212ENST00000489728 TP73-AS1Q9UF72 201 aa6.91□□□□□ -1.3
CPSF7-212ENST00000489728 MYMXA0A1B0GTQ4 84 aa6.9□□□□□ -1.3
CPSF7-212ENST00000489728 FAM168BA1KXE4 195 aa6.9□□□□□ -1.3
CPSF7-212ENST00000489728 M0QXV9 152 aa6.9□□□□□ -1.3
CPSF7-212ENST00000489728 NMUP48645 174 aa6.9□□□□□ -1.3
CPSF7-212ENST00000489728 FAM19A5Q7Z5A7 132 aaPredicted RBP6.9□□□□□ -1.3
CPSF7-212ENST00000489728 XAGE1AQ9HD64 81 aa6.9□□□□□ -1.3
CPSF7-212ENST00000489728 IGLV5-37A0A075B6J1 123 aa6.89□□□□□ -1.31
CPSF7-212ENST00000489728 C20orf202A1L168 122 aa6.89□□□□□ -1.31
CPSF7-212ENST00000489728 C3orf79P0CE67 100 aa6.89□□□□□ -1.31
CPSF7-212ENST00000489728 LBHQ53QV2 105 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-212ENST00000489728 KRTAP7-1Q8IUC3 87 aa6.89□□□□□ -1.31
CPSF7-212ENST00000489728 PMCHL2Q9BQD1 86 aa6.89□□□□□ -1.31
CPSF7-212ENST00000489728 NDUFA12Q9UI09 145 aa6.89□□□□□ -1.31
CPSF7-212ENST00000489728 E9PLD3 99 aa6.88□□□□□ -1.31
CPSF7-212ENST00000489728 J3QQQ9 107 aa6.88□□□□□ -1.31
CPSF7-212ENST00000489728 S100A6P06703 90 aa6.88□□□□□ -1.31
CPSF7-212ENST00000489728 PFN2P35080 140 aa6.88□□□□□ -1.31
CPSF7-212ENST00000489728 PHF5AQ7RTV0 110 aaKnown RBP6.88□□□□□ -1.31
CPSF7-212ENST00000489728 LGALS3P17931 250 aaKnown RBP6.87□□□□□ -1.31
CPSF7-212ENST00000489728 KRTDAPP60985 99 aa6.87□□□□□ -1.31
CPSF7-212ENST00000489728 SERTAD4-AS1Q5TG53 156 aa6.87□□□□□ -1.31
CPSF7-212ENST00000489728 HIST3H2BBQ8N257 126 aa6.87□□□□□ -1.31
CPSF7-212ENST00000489728 SND1-IT1Q9HBX3 110 aa6.87□□□□□ -1.31
CPSF7-212ENST00000489728 S100A2P29034 98 aa6.86□□□□□ -1.31
CPSF7-212ENST00000489728 TSPEAR-AS2P59090 65 aa6.86□□□□□ -1.31
CPSF7-212ENST00000489728 MRPL55Q7Z7F7 128 aaKnown RBP6.86□□□□□ -1.31
CPSF7-212ENST00000489728 PSORS1C2Q9UIG4 136 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms