RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 NTN5Q8WTR8 489 aaPredicted RBP8.49□□□□□ -1.05
TOP3A-206ENST00000489131 LINC00476Q8WZB0 136 aa8.49□□□□□ -1.05
TOP3A-206ENST00000489131 C2orf48Q96LS8 159 aa8.49□□□□□ -1.05
TOP3A-206ENST00000489131 TMEM238C9JI98 176 aa8.48□□□□□ -1.05
TOP3A-206ENST00000489131 SPANXDQ9BXN6 97 aa8.48□□□□□ -1.05
TOP3A-206ENST00000489131 SPANXCQ9NY87 97 aa8.48□□□□□ -1.05
TOP3A-206ENST00000489131 TOMM7Q9P0U1 55 aa8.48□□□□□ -1.05
TOP3A-206ENST00000489131 PTTG1IPP53801 180 aa8.47□□□□□ -1.05
TOP3A-206ENST00000489131 Q6ZRN7 208 aaPredicted RBP8.47□□□□□ -1.05
TOP3A-206ENST00000489131 LYSTQ99698 3801 aa8.47□□□□□ -1.05
TOP3A-206ENST00000489131 KMT2CQ8NEZ4 4911 aaKnown RBP8.46□□□□□ -1.05
TOP3A-206ENST00000489131 M0R143 59 aa8.46□□□□□ -1.06
TOP3A-206ENST00000489131 CKS1BP61024 79 aa8.46□□□□□ -1.06
TOP3A-206ENST00000489131 CIRBPQ14011 172 aaKnown RBP8.46□□□□□ -1.06
TOP3A-206ENST00000489131 COX17Q14061 63 aa8.46□□□□□ -1.06
TOP3A-206ENST00000489131 BVES-AS1Q5T3Y7 98 aa8.45□□□□□ -1.06
TOP3A-206ENST00000489131 CEND1Q8N111 149 aa8.45□□□□□ -1.06
TOP3A-206ENST00000489131 TRBV30A0A0K0K1B3 111 aa8.44□□□□□ -1.06
TOP3A-206ENST00000489131 USP17L23D6RBM5 183 aa8.44□□□□□ -1.06
TOP3A-206ENST00000489131 ZNF561-AS1K7EIQ3 104 aa8.44□□□□□ -1.06
TOP3A-206ENST00000489131 ADAMTSL4-AS1Q5T5F5 129 aa8.44□□□□□ -1.06
TOP3A-206ENST00000489131 C2orf82Q6UX34 121 aa8.44□□□□□ -1.06
TOP3A-206ENST00000489131 SNHG12Q9BXW3 62 aa8.44□□□□□ -1.06
TOP3A-206ENST00000489131 ALMS1Q8TCU4 4167 aa8.43□□□□□ -1.06
TOP3A-206ENST00000489131 IFITM1P13164 125 aa8.43□□□□□ -1.06
TOP3A-206ENST00000489131 RNF151Q2KHN1 245 aa8.43□□□□□ -1.06
TOP3A-206ENST00000489131 C6orf223Q8N319 242 aa8.43□□□□□ -1.06
TOP3A-206ENST00000489131 HIST1H4GQ99525 98 aa8.43□□□□□ -1.06
TOP3A-206ENST00000489131 ERG28Q9UKR5 140 aa8.43□□□□□ -1.06
TOP3A-206ENST00000489131 LOC107984156A0A0G2JMH3 177 aa8.42□□□□□ -1.06
TOP3A-206ENST00000489131 SRSF9Q13242 221 aaKnown RBP eCLIP8.42□□□□□ -1.06
TOP3A-206ENST00000489131 MEIG1Q5JSS6 88 aa8.42□□□□□ -1.06
TOP3A-206ENST00000489131 ARL17AQ8IVW1 177 aa8.42□□□□□ -1.06
TOP3A-206ENST00000489131 DNAH6Q9C0G6 4158 aa8.42□□□□□ -1.06
TOP3A-206ENST00000489131 LRCOL1A6NCL2 159 aa8.41□□□□□ -1.06
TOP3A-206ENST00000489131 LY6G6CO95867 125 aa8.41□□□□□ -1.06
TOP3A-206ENST00000489131 SMIM13P0DJ93 91 aa8.41□□□□□ -1.06
TOP3A-206ENST00000489131 GCSHP23434 173 aa8.41□□□□□ -1.06
TOP3A-206ENST00000489131 HIGD2BQ4VC39 106 aa8.41□□□□□ -1.06
TOP3A-206ENST00000489131 C14orf177Q52M58 125 aa8.41□□□□□ -1.06
TOP3A-206ENST00000489131 LBHQ53QV2 105 aaPredicted RBP8.41□□□□□ -1.06
TOP3A-206ENST00000489131 C10orf25Q5T742 122 aa8.41□□□□□ -1.06
TOP3A-206ENST00000489131 UNQ6190/PRO20217Q6UXQ8 127 aa8.41□□□□□ -1.06
TOP3A-206ENST00000489131 COPS9Q8WXC6 57 aa8.41□□□□□ -1.06
TOP3A-206ENST00000489131 C6orf48Q9UBA6 75 aa8.41□□□□□ -1.06
TOP3A-206ENST00000489131 RYR3Q15413 4870 aa8.4□□□□□ -1.06
TOP3A-206ENST00000489131 A0A1B0GWB2 263 aa8.4□□□□□ -1.06
TOP3A-206ENST00000489131 EREGO14944 169 aa8.4□□□□□ -1.06
TOP3A-206ENST00000489131 HINT1P49773 126 aaPredicted RBP8.4□□□□□ -1.06
TOP3A-206ENST00000489131 CAMK2N2Q96S95 79 aa8.4□□□□□ -1.06
TOP3A-206ENST00000489131 PSCAO43653 123 aa8.39□□□□□ -1.07
TOP3A-206ENST00000489131 FXYD2P54710 66 aa8.39□□□□□ -1.07
TOP3A-206ENST00000489131 CNBPP62633 177 aaKnown RBP8.39□□□□□ -1.07
TOP3A-206ENST00000489131 SYCNQ0VAF6 134 aa8.39□□□□□ -1.07
TOP3A-206ENST00000489131 LINC00308Q8TCZ7 52 aa8.39□□□□□ -1.07
TOP3A-206ENST00000489131 LINC00526Q96FQ7 95 aa8.39□□□□□ -1.07
TOP3A-206ENST00000489131 TMEM238LA0A1B0GVL6 79 aa8.38□□□□□ -1.07
TOP3A-206ENST00000489131 A6NJY4 79 aa8.38□□□□□ -1.07
TOP3A-206ENST00000489131 SLPIP03973 132 aa8.38□□□□□ -1.07
TOP3A-206ENST00000489131 TLX1NBP0CAT3 122 aa8.38□□□□□ -1.07
TOP3A-206ENST00000489131 RPL24P83731 157 aaKnown RBP8.38□□□□□ -1.07
TOP3A-206ENST00000489131 WFDC2Q14508 124 aa8.38□□□□□ -1.07
TOP3A-206ENST00000489131 Q6ZRU5 148 aa8.38□□□□□ -1.07
TOP3A-206ENST00000489131 MUSTN1Q8IVN3 82 aa8.38□□□□□ -1.07
TOP3A-206ENST00000489131 MIR7-3HGQ8N6C7 128 aa8.38□□□□□ -1.07
TOP3A-206ENST00000489131 M0R2N4 97 aa8.37□□□□□ -1.07
TOP3A-206ENST00000489131 LINC00158P58513 81 aa8.37□□□□□ -1.07
TOP3A-206ENST00000489131 SOSTDC1Q6X4U4 206 aa8.37□□□□□ -1.07
TOP3A-206ENST00000489131 A6NDN8 102 aa8.36□□□□□ -1.07
TOP3A-206ENST00000489131 PFN2P35080 140 aa8.36□□□□□ -1.07
TOP3A-206ENST00000489131 C1orf134Q5TEV5 83 aa8.36□□□□□ -1.07
TOP3A-206ENST00000489131 CARD19Q96LW7 228 aa8.36□□□□□ -1.07
TOP3A-206ENST00000489131 DNAH10Q8IVF4 4471 aa8.36□□□□□ -1.07
TOP3A-206ENST00000489131 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.35□□□□□ -1.07
TOP3A-206ENST00000489131 NDUFC2-KCTD14E9PQ53 114 aa8.35□□□□□ -1.07
TOP3A-206ENST00000489131 EIF4EBP3O60516 100 aaPredicted RBP8.35□□□□□ -1.07
TOP3A-206ENST00000489131 C9orf116Q5BN46 136 aaPredicted RBP8.35□□□□□ -1.07
TOP3A-206ENST00000489131 COL5A1-AS1Q5SY13 56 aa8.35□□□□□ -1.07
TOP3A-206ENST00000489131 DAND5Q8N907 189 aa8.35□□□□□ -1.07
TOP3A-206ENST00000489131 A0A0B4J2C4 111 aa8.34□□□□□ -1.07
TOP3A-206ENST00000489131 LCE6AA0A183 80 aa8.34□□□□□ -1.07
TOP3A-206ENST00000489131 A4D1N5 150 aa8.34□□□□□ -1.07
TOP3A-206ENST00000489131 LCE2DQ5TA82 110 aaPredicted RBP8.34□□□□□ -1.07
TOP3A-206ENST00000489131 SND1-IT1Q9HBX3 110 aa8.34□□□□□ -1.07
TOP3A-206ENST00000489131 A0A087WTM6 91 aa8.33□□□□□ -1.08
TOP3A-206ENST00000489131 A0A0U1RRA0 63 aa8.33□□□□□ -1.08
TOP3A-206ENST00000489131 LECT2O14960 151 aa8.33□□□□□ -1.08
TOP3A-206ENST00000489131 NDUFC2O95298 119 aa8.33□□□□□ -1.08
TOP3A-206ENST00000489131 BATFQ16520 125 aa8.33□□□□□ -1.08
TOP3A-206ENST00000489131 CFC1BP0CG36 223 aa8.32□□□□□ -1.08
TOP3A-206ENST00000489131 CFC1P0CG37 223 aa8.32□□□□□ -1.08
TOP3A-206ENST00000489131 Q8N814 137 aa8.32□□□□□ -1.08
TOP3A-206ENST00000489131 NHP2Q9NX24 153 aaKnown RBP8.32□□□□□ -1.08
TOP3A-206ENST00000489131 DNAH2Q9P225 4427 aa8.32□□□□□ -1.08
TOP3A-206ENST00000489131 KMT2AQ03164 3969 aa8.32□□□□□ -1.08
TOP3A-206ENST00000489131 PKIGQ9Y2B9 76 aa8.3□□□□□ -1.08
TOP3A-206ENST00000489131 SACSQ9NZJ4 4579 aa8.3□□□□□ -1.08
TOP3A-206ENST00000489131 DNAH17Q9UFH2 4485 aa8.29□□□□□ -1.08
TOP3A-206ENST00000489131 TAX1BP3O14907 124 aa8.29□□□□□ -1.08
TOP3A-206ENST00000489131 NPC2P61916 151 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms