RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 SPRR5A0A1B0GTR4 108 aa2.16□□□□□ -2.06
ECHDC1-217ENST00000488087 IGKV2-29A2NJV5 120 aaPredicted RBP2.16□□□□□ -2.06
ECHDC1-217ENST00000488087 PCNX2A6NKB5 2137 aa2.16□□□□□ -2.06
ECHDC1-217ENST00000488087 NREPQ16612 68 aa2.16□□□□□ -2.06
ECHDC1-217ENST00000488087 DEFB133Q30KQ1 61 aa2.16□□□□□ -2.06
ECHDC1-217ENST00000488087 ASB16-AS1Q495Z4 193 aa2.16□□□□□ -2.06
ECHDC1-217ENST00000488087 RNASE13Q5GAN3 156 aaKnown RBP2.16□□□□□ -2.06
ECHDC1-217ENST00000488087 PRR9Q5T870 116 aa2.16□□□□□ -2.06
ECHDC1-217ENST00000488087 IGFL1Q6UW32 110 aa2.16□□□□□ -2.06
ECHDC1-217ENST00000488087 UNQ9165/PRO28630Q6UXU0 137 aa2.16□□□□□ -2.06
ECHDC1-217ENST00000488087 PP632Q6XCG6 107 aa2.16□□□□□ -2.06
ECHDC1-217ENST00000488087 Q6ZQT0 140 aa2.16□□□□□ -2.06
ECHDC1-217ENST00000488087 CHCHD7Q9BUK0 85 aa2.16□□□□□ -2.06
ECHDC1-217ENST00000488087 ZNF706Q9Y5V0 76 aaPredicted RBP2.16□□□□□ -2.06
ECHDC1-217ENST00000488087 SRCAPQ6ZRS2 3230 aa2.15□□□□□ -2.06
ECHDC1-217ENST00000488087 DIDO1Q9BTC0 2240 aaKnown RBP2.15□□□□□ -2.06
ECHDC1-217ENST00000488087 SEC16AO15027 2179 aa2.15□□□□□ -2.07
ECHDC1-217ENST00000488087 CENPFP49454 3210 aa2.15□□□□□ -2.07
ECHDC1-217ENST00000488087 IGHV3-64A0A075B6Q5 118 aa2.15□□□□□ -2.07
ECHDC1-217ENST00000488087 TRAV10A0A0B4J240 114 aa2.15□□□□□ -2.07
ECHDC1-217ENST00000488087 CLPSL1A2RUU4 121 aa2.15□□□□□ -2.07
ECHDC1-217ENST00000488087 A6NN06 94 aa2.15□□□□□ -2.07
ECHDC1-217ENST00000488087 NCR3O14931 201 aa2.15□□□□□ -2.07
ECHDC1-217ENST00000488087 CMC4P56277 68 aaPredicted RBP2.15□□□□□ -2.07
ECHDC1-217ENST00000488087 ELOF1P60002 83 aaKnown RBP2.15□□□□□ -2.07
ECHDC1-217ENST00000488087 LCA10Q71F78 164 aa2.15□□□□□ -2.07
ECHDC1-217ENST00000488087 Q8N6K4 173 aa2.15□□□□□ -2.07
ECHDC1-217ENST00000488087 CIRBP-AS1Q8TBR5 109 aa2.15□□□□□ -2.07
ECHDC1-217ENST00000488087 SMIM11BQ8TCY0 68 aa2.15□□□□□ -2.07
ECHDC1-217ENST00000488087 DIRC1Q969H9 104 aa2.15□□□□□ -2.07
ECHDC1-217ENST00000488087 LIMD2Q9BT23 127 aa2.15□□□□□ -2.07
ECHDC1-217ENST00000488087 TTTY12Q9BZ98 90 aa2.15□□□□□ -2.07
ECHDC1-217ENST00000488087 SNURFQ9Y675 71 aa2.15□□□□□ -2.07
ECHDC1-217ENST00000488087 TNCP24821 2201 aa2.15□□□□□ -2.07
ECHDC1-217ENST00000488087 SVILO95425 2214 aa2.14□□□□□ -2.07
ECHDC1-217ENST00000488087 IGHV3-49A0A0A0MS15 119 aa2.14□□□□□ -2.07
ECHDC1-217ENST00000488087 TRBV6-8A0A0A6YYG3 113 aa2.14□□□□□ -2.07
ECHDC1-217ENST00000488087 TRAV22A0A0B4J277 110 aa2.14□□□□□ -2.07
ECHDC1-217ENST00000488087 A0A1B0GW54 56 aa2.14□□□□□ -2.07
ECHDC1-217ENST00000488087 TRBV6-4A0A1B0GX49 114 aa2.14□□□□□ -2.07
ECHDC1-217ENST00000488087 LECT2O14960 151 aa2.14□□□□□ -2.07
ECHDC1-217ENST00000488087 ZNF73O43830 326 aaPredicted RBP2.14□□□□□ -2.07
ECHDC1-217ENST00000488087 IGHV1-46P01743 117 aa2.14□□□□□ -2.07
ECHDC1-217ENST00000488087 CCL3L1P16619 93 aa2.14□□□□□ -2.07
ECHDC1-217ENST00000488087 C7orf65Q6ZTY9 151 aa2.14□□□□□ -2.07
ECHDC1-217ENST00000488087 Q8N814 137 aa2.14□□□□□ -2.07
ECHDC1-217ENST00000488087 ZCCHC13Q8WW36 166 aaKnown RBP2.14□□□□□ -2.07
ECHDC1-217ENST00000488087 CDKN2A-AS1Q9UH64 79 aa2.14□□□□□ -2.07
ECHDC1-217ENST00000488087 S4R3C0 116 aa2.14□□□□□ -2.07
ECHDC1-217ENST00000488087 MYO7AQ13402 2215 aa2.14□□□□□ -2.07
ECHDC1-217ENST00000488087 COL27A1Q8IZC6 1860 aaPredicted RBP2.14□□□□□ -2.07
ECHDC1-217ENST00000488087 LOC101927531A0A1B0GV80 90 aa2.13□□□□□ -2.07
ECHDC1-217ENST00000488087 GNRH2O43555 120 aa2.13□□□□□ -2.07
ECHDC1-217ENST00000488087 PSCAO43653 123 aa2.13□□□□□ -2.07
ECHDC1-217ENST00000488087 NDUFB1O75438 58 aa2.13□□□□□ -2.07
ECHDC1-217ENST00000488087 Q5VV11 94 aa2.13□□□□□ -2.07
ECHDC1-217ENST00000488087 LINC00269Q8N2A0 174 aa2.13□□□□□ -2.07
ECHDC1-217ENST00000488087 WFDC9Q8NEX5 89 aa2.13□□□□□ -2.07
ECHDC1-217ENST00000488087 EP400Q96L91 3159 aa2.13□□□□□ -2.07
ECHDC1-217ENST00000488087 INTS1Q8N201 2190 aaKnown RBP2.13□□□□□ -2.07
ECHDC1-217ENST00000488087 PDE4DIPQ5VU43 2346 aa2.13□□□□□ -2.07
ECHDC1-217ENST00000488087 CACNA1DQ01668 2161 aa2.12□□□□□ -2.07
ECHDC1-217ENST00000488087 TRBV10-1A0A0K0K1A3 114 aa2.12□□□□□ -2.07
ECHDC1-217ENST00000488087 ODF3BA8MYP8 253 aa2.12□□□□□ -2.07
ECHDC1-217ENST00000488087 LINC00313P59037 77 aa2.12□□□□□ -2.07
ECHDC1-217ENST00000488087 MINOS1Q5TGZ0 78 aa2.12□□□□□ -2.07
ECHDC1-217ENST00000488087 Q6ZS52 159 aa2.12□□□□□ -2.07
ECHDC1-217ENST00000488087 SPANXA2-OT1Q8N9U9 137 aa2.12□□□□□ -2.07
ECHDC1-217ENST00000488087 C1orf64Q8NEQ6 169 aa2.12□□□□□ -2.07
ECHDC1-217ENST00000488087 MUC7Q8TAX7 377 aa2.12□□□□□ -2.07
ECHDC1-217ENST00000488087 Q9BRP9 147 aa2.12□□□□□ -2.07
ECHDC1-217ENST00000488087 LINC00467Q9BRT7 94 aa2.12□□□□□ -2.07
ECHDC1-217ENST00000488087 U3KQA8 63 aa2.12□□□□□ -2.07
ECHDC1-217ENST00000488087 BRWD1Q9NSI6 2320 aa2.12□□□□□ -2.07
ECHDC1-217ENST00000488087 NAV3Q8IVL0 2385 aa2.12□□□□□ -2.07
ECHDC1-217ENST00000488087 PRR14LQ5THK1 2151 aa2.11□□□□□ -2.07
ECHDC1-217ENST00000488087 C16orf90A8MZG2 172 aa2.11□□□□□ -2.07
ECHDC1-217ENST00000488087 NDUFA4O00483 81 aa2.11□□□□□ -2.07
ECHDC1-217ENST00000488087 APELAP0DMC3 54 aa2.11□□□□□ -2.07
ECHDC1-217ENST00000488087 CCL18P55774 89 aa2.11□□□□□ -2.07
ECHDC1-217ENST00000488087 MP68P56378 58 aa2.11□□□□□ -2.07
ECHDC1-217ENST00000488087 KRTAP10-10P60014 251 aa2.11□□□□□ -2.07
ECHDC1-217ENST00000488087 HAMPP81172 84 aa2.11□□□□□ -2.07
ECHDC1-217ENST00000488087 DEFB108BQ8NET1 73 aa2.11□□□□□ -2.07
ECHDC1-217ENST00000488087 CDC42SE1Q9NRR8 79 aa2.11□□□□□ -2.07
ECHDC1-217ENST00000488087 DNAH12Q6ZR08 3092 aa2.11□□□□□ -2.07
ECHDC1-217ENST00000488087 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.1□□□□□ -2.07
ECHDC1-217ENST00000488087 A0A096LNT2 108 aa2.1□□□□□ -2.07
ECHDC1-217ENST00000488087 A8MTW9 85 aa2.1□□□□□ -2.07
ECHDC1-217ENST00000488087 A8MUN3 132 aa2.1□□□□□ -2.07
ECHDC1-217ENST00000488087 H3BPC8 53 aa2.1□□□□□ -2.07
ECHDC1-217ENST00000488087 H3BUA1 57 aa2.1□□□□□ -2.07
ECHDC1-217ENST00000488087 IGHV3-53P01767 116 aa2.1□□□□□ -2.07
ECHDC1-217ENST00000488087 IGKV4-1P06312 121 aa2.1□□□□□ -2.07
ECHDC1-217ENST00000488087 COX6A2Q02221 97 aa2.1□□□□□ -2.07
ECHDC1-217ENST00000488087 FAM74A4Q5TZK3 123 aa2.1□□□□□ -2.07
ECHDC1-217ENST00000488087 LINC00575Q6W349 94 aa2.1□□□□□ -2.07
ECHDC1-217ENST00000488087 Q6ZTI0 123 aa2.1□□□□□ -2.07
ECHDC1-217ENST00000488087 COX7B2Q8TF08 81 aa2.1□□□□□ -2.07
ECHDC1-217ENST00000488087 CDC42SE2Q9NRR3 84 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms