RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 ICOSQ9Y6W8 199 aa6.34□□□□□ -1.39
TMEM39A-208ENST00000486159 DNAH10OSP0CZ25 163 aa6.33□□□□□ -1.4
TMEM39A-208ENST00000486159 LINC00242Q5T6M2 205 aa6.33□□□□□ -1.4
TMEM39A-208ENST00000486159 HIST1H4GQ99525 98 aa6.33□□□□□ -1.4
TMEM39A-208ENST00000486159 TTTY13Q9BZ97 58 aa6.33□□□□□ -1.4
TMEM39A-208ENST00000486159 COX11Q9Y6N1 276 aa6.33□□□□□ -1.4
TMEM39A-208ENST00000486159 KRTAP9-6A0A140TA67 174 aa6.32□□□□□ -1.4
TMEM39A-208ENST00000486159 IGHV3-30-3P0DP02 117 aa6.32□□□□□ -1.4
TMEM39A-208ENST00000486159 GCSHP23434 173 aa6.32□□□□□ -1.4
TMEM39A-208ENST00000486159 XGP55808 180 aa6.32□□□□□ -1.4
TMEM39A-208ENST00000486159 GAGE6Q13070 117 aa6.32□□□□□ -1.4
TMEM39A-208ENST00000486159 RNASE13Q5GAN3 156 aaKnown RBP6.32□□□□□ -1.4
TMEM39A-208ENST00000486159 TTC32Q5I0X7 151 aa6.32□□□□□ -1.4
TMEM39A-208ENST00000486159 LYPD5Q6UWN5 251 aa6.32□□□□□ -1.4
TMEM39A-208ENST00000486159 Q6ZVH6 145 aa6.32□□□□□ -1.4
TMEM39A-208ENST00000486159 IGLV5-39A0A0G2JS06 123 aa6.31□□□□□ -1.4
TMEM39A-208ENST00000486159 TMEM238C9JI98 176 aa6.31□□□□□ -1.4
TMEM39A-208ENST00000486159 TIMM17BO60830 172 aa6.31□□□□□ -1.4
TMEM39A-208ENST00000486159 SMIM13P0DJ93 91 aa6.31□□□□□ -1.4
TMEM39A-208ENST00000486159 PTTG1IPP53801 180 aa6.31□□□□□ -1.4
TMEM39A-208ENST00000486159 KRTAP10-1P60331 282 aa6.31□□□□□ -1.4
TMEM39A-208ENST00000486159 HAMPP81172 84 aa6.31□□□□□ -1.4
TMEM39A-208ENST00000486159 SRSF9Q13242 221 aaKnown RBP eCLIP6.31□□□□□ -1.4
TMEM39A-208ENST00000486159 LELP1Q5T871 98 aa6.31□□□□□ -1.4
TMEM39A-208ENST00000486159 WFDC10BQ8IUB3 73 aa6.31□□□□□ -1.4
TMEM39A-208ENST00000486159 LINC01561Q8N1V8 128 aa6.31□□□□□ -1.4
TMEM39A-208ENST00000486159 CDKN2A-AS1Q9UH64 79 aa6.31□□□□□ -1.4
TMEM39A-208ENST00000486159 TRAV13-1A0A0B4J241 112 aa6.3□□□□□ -1.4
TMEM39A-208ENST00000486159 TAX1BP3O14907 124 aa6.3□□□□□ -1.4
TMEM39A-208ENST00000486159 TSPEAR-AS2P59090 65 aa6.3□□□□□ -1.4
TMEM39A-208ENST00000486159 SFTA2Q6UW10 78 aa6.3□□□□□ -1.4
TMEM39A-208ENST00000486159 A0A0J9YXY3 114 aa6.29□□□□□ -1.4
TMEM39A-208ENST00000486159 A0A1B0GWB2 263 aa6.29□□□□□ -1.4
TMEM39A-208ENST00000486159 TMEM262E9PQX1 116 aa6.29□□□□□ -1.4
TMEM39A-208ENST00000486159 NDUFA1O15239 70 aa6.29□□□□□ -1.4
TMEM39A-208ENST00000486159 RBX1P62877 108 aa6.29□□□□□ -1.4
TMEM39A-208ENST00000486159 HERV-K104P63124 156 aa6.29□□□□□ -1.4
TMEM39A-208ENST00000486159 SS18Q15532 418 aa6.29□□□□□ -1.4
TMEM39A-208ENST00000486159 COPS9Q8WXC6 57 aa6.29□□□□□ -1.4
TMEM39A-208ENST00000486159 NDUFA12Q9UI09 145 aa6.29□□□□□ -1.4
TMEM39A-208ENST00000486159 DNAH8Q96JB1 4490 aa6.29□□□□□ -1.4
TMEM39A-208ENST00000486159 IGLV4-60A0A075B6I1 120 aa6.28□□□□□ -1.4
TMEM39A-208ENST00000486159 A0A087WTM6 91 aa6.28□□□□□ -1.4
TMEM39A-208ENST00000486159 C9orf118A6NHY6 69 aa6.28□□□□□ -1.4
TMEM39A-208ENST00000486159 SMIM1B2RUZ4 78 aa6.28□□□□□ -1.4
TMEM39A-208ENST00000486159 SMR3BP02814 79 aaPredicted RBP6.28□□□□□ -1.4
TMEM39A-208ENST00000486159 SPINK8P0C7L1 97 aa6.28□□□□□ -1.4
TMEM39A-208ENST00000486159 FXYD2P54710 66 aa6.28□□□□□ -1.4
TMEM39A-208ENST00000486159 COX6A2Q02221 97 aa6.28□□□□□ -1.4
TMEM39A-208ENST00000486159 CIRBPQ14011 172 aaKnown RBP6.28□□□□□ -1.4
TMEM39A-208ENST00000486159 IGHV3-64A0A075B6Q5 118 aa6.27□□□□□ -1.41
TMEM39A-208ENST00000486159 A0A087WZ39 114 aa6.27□□□□□ -1.41
TMEM39A-208ENST00000486159 TRAV8-3A0A0A6YYJ7 113 aa6.27□□□□□ -1.41
TMEM39A-208ENST00000486159 IGHV3OR16-9A0A0B4J2B5 98 aa6.27□□□□□ -1.41
TMEM39A-208ENST00000486159 LINC00959A0A1B0GUT2 108 aa6.27□□□□□ -1.41
TMEM39A-208ENST00000486159 IFITM1P13164 125 aa6.27□□□□□ -1.41
TMEM39A-208ENST00000486159 RPL24P83731 157 aaKnown RBP6.27□□□□□ -1.41
TMEM39A-208ENST00000486159 SPANXDQ9BXN6 97 aa6.27□□□□□ -1.41
TMEM39A-208ENST00000486159 PPDPFQ9H3Y8 114 aa6.27□□□□□ -1.41
TMEM39A-208ENST00000486159 SPANXCQ9NY87 97 aa6.27□□□□□ -1.41
TMEM39A-208ENST00000486159 EPM2AB3EWF7 344 aa6.26□□□□□ -1.41
TMEM39A-208ENST00000486159 IGHV3-30P01768 117 aa6.26□□□□□ -1.41
TMEM39A-208ENST00000486159 IGHV3-30-5P0DP03 117 aa6.26□□□□□ -1.41
TMEM39A-208ENST00000486159 C10orf126Q8N4M7 172 aa6.26□□□□□ -1.41
TMEM39A-208ENST00000486159 NHP2Q9NX24 153 aaKnown RBP6.26□□□□□ -1.41
TMEM39A-208ENST00000486159 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.25□□□□□ -1.41
TMEM39A-208ENST00000486159 VAMP3Q15836 100 aa6.25□□□□□ -1.41
TMEM39A-208ENST00000486159 Q5VSD8 79 aa6.25□□□□□ -1.41
TMEM39A-208ENST00000486159 MYCBP2O75592 4640 aa6.25□□□□□ -1.41
TMEM39A-208ENST00000486159 VPS13BQ7Z7G8 4022 aa6.25□□□□□ -1.41
TMEM39A-208ENST00000486159 INAFM2P0DMQ5 153 aa6.24□□□□□ -1.41
TMEM39A-208ENST00000486159 UBE2V1Q13404 147 aa6.24□□□□□ -1.41
TMEM39A-208ENST00000486159 MIAQ16674 131 aa6.24□□□□□ -1.41
TMEM39A-208ENST00000486159 CD164L2Q6UWJ8 174 aa6.24□□□□□ -1.41
TMEM39A-208ENST00000486159 GTF2H5Q6ZYL4 71 aa6.24□□□□□ -1.41
TMEM39A-208ENST00000486159 COX7B2Q8TF08 81 aa6.24□□□□□ -1.41
TMEM39A-208ENST00000486159 ZNF625Q96I27 306 aaPredicted RBP6.24□□□□□ -1.41
TMEM39A-208ENST00000486159 A0A0B4J2C4 111 aa6.23□□□□□ -1.41
TMEM39A-208ENST00000486159 LRCOL1A6NCL2 159 aa6.23□□□□□ -1.41
TMEM39A-208ENST00000486159 ANGP03950 147 aaKnown RBP6.23□□□□□ -1.41
TMEM39A-208ENST00000486159 FABP2P12104 132 aa6.23□□□□□ -1.41
TMEM39A-208ENST00000486159 REG3AQ06141 175 aa6.23□□□□□ -1.41
TMEM39A-208ENST00000486159 LYRM7Q5U5X0 104 aa6.23□□□□□ -1.41
TMEM39A-208ENST00000486159 LITAFQ99732 161 aa6.23□□□□□ -1.41
TMEM39A-208ENST00000486159 KRTAP9-2Q9BYQ4 174 aa6.23□□□□□ -1.41
TMEM39A-208ENST00000486159 PRR34Q9NV39 138 aa6.23□□□□□ -1.41
TMEM39A-208ENST00000486159 FAM30AQ9NZY2 134 aa6.23□□□□□ -1.41
TMEM39A-208ENST00000486159 TRAV8-4A0A0B4J246 113 aa6.22□□□□□ -1.41
TMEM39A-208ENST00000486159 A0A1W2PPM0 123 aa6.22□□□□□ -1.41
TMEM39A-208ENST00000486159 H3BUT2 72 aa6.22□□□□□ -1.41
TMEM39A-208ENST00000486159 IGHV3-33P01772 117 aa6.22□□□□□ -1.41
TMEM39A-208ENST00000486159 CXCL5P42830 114 aa6.22□□□□□ -1.41
TMEM39A-208ENST00000486159 WFDC2Q14508 124 aa6.22□□□□□ -1.41
TMEM39A-208ENST00000486159 LINC00269Q8N2A0 174 aa6.22□□□□□ -1.41
TMEM39A-208ENST00000486159 IGKV3OR2-268A0A0C4DH90 116 aa6.21□□□□□ -1.42
TMEM39A-208ENST00000486159 K7EP13 123 aa6.21□□□□□ -1.42
TMEM39A-208ENST00000486159 COX7A2LO14548 114 aa6.21□□□□□ -1.42
TMEM39A-208ENST00000486159 MUSTN1Q8IVN3 82 aa6.21□□□□□ -1.42
TMEM39A-208ENST00000486159 Q8IZM0 81 aa6.21□□□□□ -1.42
TMEM39A-208ENST00000486159 RAB37Q96AX2 223 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms