RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 LINC01561Q8N1V8 128 aa8.03□□□□□ -1.12
HDAC6-227ENST00000485102 MALP21145 153 aa8.02□□□□□ -1.13
HDAC6-227ENST00000485102 XCL1P47992 114 aa8.02□□□□□ -1.13
HDAC6-227ENST00000485102 SYCNQ0VAF6 134 aa8.02□□□□□ -1.13
HDAC6-227ENST00000485102 FAM19A3Q7Z5A8 133 aa8.02□□□□□ -1.13
HDAC6-227ENST00000485102 IFI27L1Q96BM0 104 aa8.02□□□□□ -1.13
HDAC6-227ENST00000485102 GEMIN7Q9H840 131 aaKnown RBP8.02□□□□□ -1.13
HDAC6-227ENST00000485102 TRAV12-1A0A0B4J245 112 aa8.01□□□□□ -1.13
HDAC6-227ENST00000485102 F8WDY8 70 aa8.01□□□□□ -1.13
HDAC6-227ENST00000485102 COX7A2LO14548 114 aa8.01□□□□□ -1.13
HDAC6-227ENST00000485102 PTTG1IPP53801 180 aa8.01□□□□□ -1.13
HDAC6-227ENST00000485102 URB1-AS1Q96HZ7 61 aa8.01□□□□□ -1.13
HDAC6-227ENST00000485102 H3BRM9 83 aa8□□□□□ -1.13
HDAC6-227ENST00000485102 ZNF561-AS1K7EIQ3 104 aa8□□□□□ -1.13
HDAC6-227ENST00000485102 LINC00526Q96FQ7 95 aa8□□□□□ -1.13
HDAC6-227ENST00000485102 MAP1LC3CQ9BXW4 147 aa8□□□□□ -1.13
HDAC6-227ENST00000485102 LPAP08519 4548 aa8□□□□□ -1.13
HDAC6-227ENST00000485102 LOC107984640A0A0U1RRK4 108 aa7.99□□□□□ -1.13
HDAC6-227ENST00000485102 TINCRA0A1B0GVN0 87 aa7.99□□□□□ -1.13
HDAC6-227ENST00000485102 UBE2D1P51668 147 aa7.99□□□□□ -1.13
HDAC6-227ENST00000485102 CST9LQ9H4G1 147 aa7.99□□□□□ -1.13
HDAC6-227ENST00000485102 A0A096LNJ9 63 aa7.98□□□□□ -1.13
HDAC6-227ENST00000485102 S100A2P29034 98 aa7.98□□□□□ -1.13
HDAC6-227ENST00000485102 NDUFA6P56556 154 aa7.98□□□□□ -1.13
HDAC6-227ENST00000485102 OR10D4PQ8NGN7 298 aa7.98□□□□□ -1.13
HDAC6-227ENST00000485102 A0A1W2PNN7 141 aa7.97□□□□□ -1.13
HDAC6-227ENST00000485102 PMCHL1Q16048 86 aa7.97□□□□□ -1.13
HDAC6-227ENST00000485102 RNASE13Q5GAN3 156 aaKnown RBP7.97□□□□□ -1.13
HDAC6-227ENST00000485102 LINC00242Q5T6M2 205 aa7.97□□□□□ -1.13
HDAC6-227ENST00000485102 OPRPNQ99935 248 aaPredicted RBP7.97□□□□□ -1.13
HDAC6-227ENST00000485102 PSORS1C2Q9UIG4 136 aa7.97□□□□□ -1.13
HDAC6-227ENST00000485102 IGLV4-69A0A075B6H9 119 aa7.96□□□□□ -1.14
HDAC6-227ENST00000485102 A0A087WZ39 114 aa7.96□□□□□ -1.14
HDAC6-227ENST00000485102 IGHV3OR16-9A0A0B4J2B5 98 aa7.96□□□□□ -1.14
HDAC6-227ENST00000485102 PLNP26678 52 aa7.96□□□□□ -1.14
HDAC6-227ENST00000485102 SFTA2Q6UW10 78 aa7.96□□□□□ -1.14
HDAC6-227ENST00000485102 FAM19A2Q8N3H0 131 aa7.96□□□□□ -1.14
HDAC6-227ENST00000485102 C2orf48Q96LS8 159 aa7.96□□□□□ -1.14
HDAC6-227ENST00000485102 C20orf202A1L168 122 aa7.95□□□□□ -1.14
HDAC6-227ENST00000485102 F8VRH5 84 aa7.95□□□□□ -1.14
HDAC6-227ENST00000485102 IGLC3P0DOY3 106 aa7.95□□□□□ -1.14
HDAC6-227ENST00000485102 GAGE2BQ13066 116 aa7.95□□□□□ -1.14
HDAC6-227ENST00000485102 LINC00173Q6ZV60 143 aa7.95□□□□□ -1.14
HDAC6-227ENST00000485102 FAM104AQ969W3 186 aa7.95□□□□□ -1.14
HDAC6-227ENST00000485102 CHTOPQ9Y3Y2 248 aaKnown RBP7.95□□□□□ -1.14
HDAC6-227ENST00000485102 IGLV5-45A0A087WSX0 123 aa7.94□□□□□ -1.14
HDAC6-227ENST00000485102 PRSS2P07478 247 aa7.94□□□□□ -1.14
HDAC6-227ENST00000485102 CXCL5P42830 114 aa7.94□□□□□ -1.14
HDAC6-227ENST00000485102 RNF151Q2KHN1 245 aa7.94□□□□□ -1.14
HDAC6-227ENST00000485102 C9orf116Q5BN46 136 aaPredicted RBP7.94□□□□□ -1.14
HDAC6-227ENST00000485102 LINC00469Q8N7U9 141 aa7.94□□□□□ -1.14
HDAC6-227ENST00000485102 FABP4P15090 132 aa7.93□□□□□ -1.14
HDAC6-227ENST00000485102 LINC00310P59036 64 aa7.93□□□□□ -1.14
HDAC6-227ENST00000485102 PET117Q6UWS5 81 aa7.93□□□□□ -1.14
HDAC6-227ENST00000485102 C5orf38Q86SI9 138 aa7.92□□□□□ -1.14
HDAC6-227ENST00000485102 CAMK2N2Q96S95 79 aa7.92□□□□□ -1.14
HDAC6-227ENST00000485102 HERVK_113P61574 105 aa7.91□□□□□ -1.14
HDAC6-227ENST00000485102 C1orf137Q5JT78 98 aa7.91□□□□□ -1.14
HDAC6-227ENST00000485102 DIRC1Q969H9 104 aa7.91□□□□□ -1.14
HDAC6-227ENST00000485102 NUPR1O60356 82 aa7.9□□□□□ -1.14
HDAC6-227ENST00000485102 DPM2O94777 84 aa7.9□□□□□ -1.14
HDAC6-227ENST00000485102 IGLV7-43P04211 117 aa7.9□□□□□ -1.14
HDAC6-227ENST00000485102 SPAG11BQ08648 103 aa7.9□□□□□ -1.14
HDAC6-227ENST00000485102 C6orf226Q5I0X4 101 aa7.9□□□□□ -1.14
HDAC6-227ENST00000485102 TMEM170BQ5T4T1 132 aa7.9□□□□□ -1.14
HDAC6-227ENST00000485102 Q8IZM0 81 aa7.9□□□□□ -1.14
HDAC6-227ENST00000485102 ORAOV1Q8WV07 137 aa7.9□□□□□ -1.14
HDAC6-227ENST00000485102 SYS1-DBNDD2H3BUS1 97 aa7.89□□□□□ -1.15
HDAC6-227ENST00000485102 NDUFA1O15239 70 aa7.89□□□□□ -1.15
HDAC6-227ENST00000485102 CKS1BP61024 79 aa7.89□□□□□ -1.15
HDAC6-227ENST00000485102 PHF5AQ7RTV0 110 aaKnown RBP7.89□□□□□ -1.15
HDAC6-227ENST00000485102 MRPL35Q9NZE8 188 aaKnown RBP7.89□□□□□ -1.15
HDAC6-227ENST00000485102 CDKN2A-AS1Q9UH64 79 aa7.89□□□□□ -1.15
HDAC6-227ENST00000485102 MUC2Q02817 5179 aa7.89□□□□□ -1.15
HDAC6-227ENST00000485102 IGLV1-50A0A075B6I6 118 aa7.88□□□□□ -1.15
HDAC6-227ENST00000485102 C11orf86A6NJI1 115 aa7.88□□□□□ -1.15
HDAC6-227ENST00000485102 H0Y8G0 127 aa7.88□□□□□ -1.15
HDAC6-227ENST00000485102 IGKCP01834 107 aa7.88□□□□□ -1.15
HDAC6-227ENST00000485102 SNRPEP62304 92 aaKnown RBP7.88□□□□□ -1.15
HDAC6-227ENST00000485102 HIST3H2BBQ8N257 126 aa7.88□□□□□ -1.15
HDAC6-227ENST00000485102 PRR26Q8N8Z3 221 aa7.88□□□□□ -1.15
HDAC6-227ENST00000485102 TRBV30A0A0K0K1B3 111 aa7.87□□□□□ -1.15
HDAC6-227ENST00000485102 LINC00587B1AMM8 73 aa7.87□□□□□ -1.15
HDAC6-227ENST00000485102 H0Y9J4 135 aa7.87□□□□□ -1.15
HDAC6-227ENST00000485102 TLX1NBP0CAT3 122 aa7.87□□□□□ -1.15
HDAC6-227ENST00000485102 RPL18AQ02543 176 aaKnown RBP7.87□□□□□ -1.15
HDAC6-227ENST00000485102 ZC2HC1BQ5TFG8 222 aa7.87□□□□□ -1.15
HDAC6-227ENST00000485102 C5orf52A6NGY3 159 aa7.86□□□□□ -1.15
HDAC6-227ENST00000485102 ZNF22P17026 224 aaPredicted RBP7.86□□□□□ -1.15
HDAC6-227ENST00000485102 KRTDAPP60985 99 aa7.86□□□□□ -1.15
HDAC6-227ENST00000485102 LINC01545Q5VT33 79 aa7.86□□□□□ -1.15
HDAC6-227ENST00000485102 SMIM1B2RUZ4 78 aa7.85□□□□□ -1.15
HDAC6-227ENST00000485102 KRTAP1-4P0C5Y4 121 aa7.85□□□□□ -1.15
HDAC6-227ENST00000485102 COX7B2Q8TF08 81 aa7.85□□□□□ -1.15
HDAC6-227ENST00000485102 HIST1H2BLQ99880 126 aa7.85□□□□□ -1.15
HDAC6-227ENST00000485102 IGLV5-39A0A0G2JS06 123 aa7.84□□□□□ -1.15
HDAC6-227ENST00000485102 C3orf79P0CE67 100 aa7.84□□□□□ -1.15
HDAC6-227ENST00000485102 KRTAP11-1Q8IUC1 163 aa7.84□□□□□ -1.15
HDAC6-227ENST00000485102 PLEKHB2Q96CS7 222 aa7.84□□□□□ -1.15
HDAC6-227ENST00000485102 TOMM7Q9P0U1 55 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms