RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 HERV-K104P63124 156 aa6.68□□□□□ -1.34
HDAC6-226ENST00000483656 SPAG11BQ08648 103 aa6.68□□□□□ -1.34
HDAC6-226ENST00000483656 TAL2Q16559 108 aa6.68□□□□□ -1.34
HDAC6-226ENST00000483656 BIRC6Q9NR09 4857 aa6.68□□□□□ -1.34
HDAC6-226ENST00000483656 TIMM17BO60830 172 aa6.67□□□□□ -1.34
HDAC6-226ENST00000483656 PRSS2P07478 247 aa6.67□□□□□ -1.34
HDAC6-226ENST00000483656 FXYD2P54710 66 aa6.67□□□□□ -1.34
HDAC6-226ENST00000483656 C10orf25Q5T742 122 aa6.67□□□□□ -1.34
HDAC6-226ENST00000483656 CEND1Q8N111 149 aa6.67□□□□□ -1.34
HDAC6-226ENST00000483656 NTN5Q8WTR8 489 aaPredicted RBP6.67□□□□□ -1.34
HDAC6-226ENST00000483656 RMI2Q96E14 147 aa6.67□□□□□ -1.34
HDAC6-226ENST00000483656 HIST1H4GQ99525 98 aa6.67□□□□□ -1.34
HDAC6-226ENST00000483656 TM2D2Q9BX73 214 aa6.67□□□□□ -1.34
HDAC6-226ENST00000483656 C3orf84H3BNL1 204 aa6.66□□□□□ -1.34
HDAC6-226ENST00000483656 SMIM13P0DJ93 91 aa6.66□□□□□ -1.34
HDAC6-226ENST00000483656 BATFQ16520 125 aa6.66□□□□□ -1.34
HDAC6-226ENST00000483656 HIGD2BQ4VC39 106 aa6.66□□□□□ -1.34
HDAC6-226ENST00000483656 CFAP161Q6P656 301 aa6.66□□□□□ -1.34
HDAC6-226ENST00000483656 UNQ6190/PRO20217Q6UXQ8 127 aa6.66□□□□□ -1.34
HDAC6-226ENST00000483656 SPANXDQ9BXN6 97 aa6.66□□□□□ -1.34
HDAC6-226ENST00000483656 SPANXCQ9NY87 97 aa6.66□□□□□ -1.34
HDAC6-226ENST00000483656 GVQW2A0A096LPI5 108 aaPredicted RBP6.65□□□□□ -1.34
HDAC6-226ENST00000483656 A0A0U1RRA0 63 aa6.65□□□□□ -1.34
HDAC6-226ENST00000483656 TMEM238C9JI98 176 aa6.65□□□□□ -1.34
HDAC6-226ENST00000483656 EIF4EBP3O60516 100 aaPredicted RBP6.65□□□□□ -1.34
HDAC6-226ENST00000483656 GCSHP23434 173 aa6.65□□□□□ -1.34
HDAC6-226ENST00000483656 CXCL5P42830 114 aa6.65□□□□□ -1.34
HDAC6-226ENST00000483656 CKS1BP61024 79 aa6.65□□□□□ -1.34
HDAC6-226ENST00000483656 SRSF9Q13242 221 aaKnown RBP eCLIP6.65□□□□□ -1.34
HDAC6-226ENST00000483656 TTC32Q5I0X7 151 aa6.65□□□□□ -1.34
HDAC6-226ENST00000483656 MUSTN1Q8IVN3 82 aa6.65□□□□□ -1.34
HDAC6-226ENST00000483656 DAND5Q8N907 189 aa6.65□□□□□ -1.34
HDAC6-226ENST00000483656 DNAH17Q9UFH2 4485 aa6.65□□□□□ -1.34
HDAC6-226ENST00000483656 KMT2AQ03164 3969 aa6.65□□□□□ -1.35
HDAC6-226ENST00000483656 USP17L23D6RBM5 183 aa6.64□□□□□ -1.35
HDAC6-226ENST00000483656 WFDC2Q14508 124 aa6.64□□□□□ -1.35
HDAC6-226ENST00000483656 MEIG1Q5JSS6 88 aa6.64□□□□□ -1.35
HDAC6-226ENST00000483656 SFTA2Q6UW10 78 aa6.64□□□□□ -1.35
HDAC6-226ENST00000483656 Q6ZR54 194 aa6.64□□□□□ -1.35
HDAC6-226ENST00000483656 Q6ZRN7 208 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-226ENST00000483656 ERG28Q9UKR5 140 aa6.64□□□□□ -1.35
HDAC6-226ENST00000483656 COX11Q9Y6N1 276 aa6.64□□□□□ -1.35
HDAC6-226ENST00000483656 SACSQ9NZJ4 4579 aa6.63□□□□□ -1.35
HDAC6-226ENST00000483656 M0R2N4 97 aa6.63□□□□□ -1.35
HDAC6-226ENST00000483656 CIRBPQ14011 172 aaKnown RBP6.63□□□□□ -1.35
HDAC6-226ENST00000483656 C9orf116Q5BN46 136 aaPredicted RBP6.63□□□□□ -1.35
HDAC6-226ENST00000483656 SOSTDC1Q6X4U4 206 aa6.63□□□□□ -1.35
HDAC6-226ENST00000483656 LINC00476Q8WZB0 136 aa6.63□□□□□ -1.35
HDAC6-226ENST00000483656 C2orf48Q96LS8 159 aa6.63□□□□□ -1.35
HDAC6-226ENST00000483656 C6orf48Q9UBA6 75 aa6.63□□□□□ -1.35
HDAC6-226ENST00000483656 ZNF561-AS1K7EIQ3 104 aa6.62□□□□□ -1.35
HDAC6-226ENST00000483656 LY6G6CO95867 125 aa6.62□□□□□ -1.35
HDAC6-226ENST00000483656 SLPIP03973 132 aa6.62□□□□□ -1.35
HDAC6-226ENST00000483656 PFN2P35080 140 aa6.62□□□□□ -1.35
HDAC6-226ENST00000483656 PTTG1IPP53801 180 aa6.62□□□□□ -1.35
HDAC6-226ENST00000483656 LINC00158P58513 81 aa6.62□□□□□ -1.35
HDAC6-226ENST00000483656 NPC2P61916 151 aa6.62□□□□□ -1.35
HDAC6-226ENST00000483656 Q6ZRU5 148 aa6.62□□□□□ -1.35
HDAC6-226ENST00000483656 Q6ZVH6 145 aa6.62□□□□□ -1.35
HDAC6-226ENST00000483656 MIR7-3HGQ8N6C7 128 aa6.62□□□□□ -1.35
HDAC6-226ENST00000483656 LINC00308Q8TCZ7 52 aa6.62□□□□□ -1.35
HDAC6-226ENST00000483656 LECT2O14960 151 aa6.61□□□□□ -1.35
HDAC6-226ENST00000483656 IFITM1P13164 125 aa6.61□□□□□ -1.35
HDAC6-226ENST00000483656 CAMK2N2Q96S95 79 aa6.61□□□□□ -1.35
HDAC6-226ENST00000483656 A0A1B0GWB2 263 aa6.6□□□□□ -1.35
HDAC6-226ENST00000483656 A4D1N5 150 aa6.6□□□□□ -1.35
HDAC6-226ENST00000483656 LRCOL1A6NCL2 159 aa6.6□□□□□ -1.35
HDAC6-226ENST00000483656 F8WDY8 70 aa6.6□□□□□ -1.35
HDAC6-226ENST00000483656 COL5A1-AS1Q5SY13 56 aa6.6□□□□□ -1.35
HDAC6-226ENST00000483656 HYDINQ4G0P3 5121 aa6.59□□□□□ -1.35
HDAC6-226ENST00000483656 TRBV30A0A0K0K1B3 111 aa6.59□□□□□ -1.35
HDAC6-226ENST00000483656 K7ERJ3 54 aa6.59□□□□□ -1.35
HDAC6-226ENST00000483656 TAX1BP3O14907 124 aa6.59□□□□□ -1.35
HDAC6-226ENST00000483656 SYCNQ0VAF6 134 aa6.59□□□□□ -1.35
HDAC6-226ENST00000483656 COX17Q14061 63 aa6.59□□□□□ -1.35
HDAC6-226ENST00000483656 PPDPFQ9H3Y8 114 aa6.59□□□□□ -1.35
HDAC6-226ENST00000483656 NHP2Q9NX24 153 aaKnown RBP6.59□□□□□ -1.35
HDAC6-226ENST00000483656 DNAH11Q96DT5 4516 aa6.59□□□□□ -1.35
HDAC6-226ENST00000483656 FRAS1Q86XX4 4008 aa6.58□□□□□ -1.36
HDAC6-226ENST00000483656 A6NDN8 102 aa6.58□□□□□ -1.36
HDAC6-226ENST00000483656 PSCAO43653 123 aa6.58□□□□□ -1.36
HDAC6-226ENST00000483656 CFC1BP0CG36 223 aa6.58□□□□□ -1.36
HDAC6-226ENST00000483656 CFC1P0CG37 223 aa6.58□□□□□ -1.36
HDAC6-226ENST00000483656 RPL24P83731 157 aaKnown RBP6.58□□□□□ -1.36
HDAC6-226ENST00000483656 LBHQ53QV2 105 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-226ENST00000483656 EPPK1P58107 5090 aaKnown RBP6.57□□□□□ -1.36
HDAC6-226ENST00000483656 LOC107984156A0A0G2JMH3 177 aa6.57□□□□□ -1.36
HDAC6-226ENST00000483656 RNF151Q2KHN1 245 aa6.57□□□□□ -1.36
HDAC6-226ENST00000483656 ARL17AQ8IVW1 177 aa6.57□□□□□ -1.36
HDAC6-226ENST00000483656 HECTD4Q9Y4D8 3996 aa6.56□□□□□ -1.36
HDAC6-226ENST00000483656 TMEM238LA0A1B0GVL6 79 aa6.56□□□□□ -1.36
HDAC6-226ENST00000483656 A6NJY4 79 aa6.56□□□□□ -1.36
HDAC6-226ENST00000483656 CARD19Q96LW7 228 aa6.56□□□□□ -1.36
HDAC6-226ENST00000483656 SND1-IT1Q9HBX3 110 aa6.56□□□□□ -1.36
HDAC6-226ENST00000483656 Q8NDZ9 215 aa6.55□□□□□ -1.36
HDAC6-226ENST00000483656 RAB37Q96AX2 223 aa6.55□□□□□ -1.36
HDAC6-226ENST00000483656 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-226ENST00000483656 A0A0B4J2C4 111 aa6.54□□□□□ -1.36
HDAC6-226ENST00000483656 NDUFC2-KCTD14E9PQ53 114 aa6.54□□□□□ -1.36
HDAC6-226ENST00000483656 CNBPP62633 177 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms