RNA–Protein interactions for RNA: ENST00000482684.5

CUTA-208, Transcript of cutA divalent cation tolerance homolog, humanhuman

TSL 1 (best)

Gene CUTA, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUTA-208ENST00000482684 KRTAP10-1P60331 282 aa13.23□□□□□ -0.29
CUTA-208ENST00000482684 C2orf82Q6UX34 121 aa13.23□□□□□ -0.29
CUTA-208ENST00000482684 UNQ6190/PRO20217Q6UXQ8 127 aa13.23□□□□□ -0.29
CUTA-208ENST00000482684 RNF151Q2KHN1 245 aa13.22□□□□□ -0.29
CUTA-208ENST00000482684 TRBV30A0A0K0K1B3 111 aa13.21□□□□□ -0.29
CUTA-208ENST00000482684 C10orf25Q5T742 122 aa13.2□□□□□ -0.3
CUTA-208ENST00000482684 LOC107984640A0A0U1RRK4 108 aa13.19□□□□□ -0.3
CUTA-208ENST00000482684 SDIM1Q6ZPB5 146 aa13.19□□□□□ -0.3
CUTA-208ENST00000482684 PKD1P98161 4303 aa13.18□□□□□ -0.3
CUTA-208ENST00000482684 SFTA2Q6UW10 78 aa13.18□□□□□ -0.3
CUTA-208ENST00000482684 PLEKHB2Q96CS7 222 aa13.18□□□□□ -0.3
CUTA-208ENST00000482684 C6orf48Q9UBA6 75 aa13.18□□□□□ -0.3
CUTA-208ENST00000482684 LEPROTO15243 131 aa13.17□□□□□ -0.3
CUTA-208ENST00000482684 DPH3Q96FX2 82 aa13.17□□□□□ -0.3
CUTA-208ENST00000482684 RPL18AQ02543 176 aaKnown RBP13.15□□□□□ -0.3
CUTA-208ENST00000482684 SCGB1D1O95968 90 aa13.13□□□□□ -0.31
CUTA-208ENST00000482684 LGALS3P17931 250 aaKnown RBP13.13□□□□□ -0.31
CUTA-208ENST00000482684 GAGE2BQ13066 116 aa13.13□□□□□ -0.31
CUTA-208ENST00000482684 LINC00474Q9P2X8 69 aa13.13□□□□□ -0.31
CUTA-208ENST00000482684 IGKV2-24A0A0C4DH68 120 aa13.12□□□□□ -0.31
CUTA-208ENST00000482684 E9PLD3 99 aa13.12□□□□□ -0.31
CUTA-208ENST00000482684 TLX1NBP0CAT3 122 aa13.12□□□□□ -0.31
CUTA-208ENST00000482684 C9orf116Q5BN46 136 aaPredicted RBP13.12□□□□□ -0.31
CUTA-208ENST00000482684 ATOH7Q8N100 152 aa13.12□□□□□ -0.31
CUTA-208ENST00000482684 STPG4Q8N801 248 aa13.12□□□□□ -0.31
CUTA-208ENST00000482684 FAM30AQ9NZY2 134 aa13.12□□□□□ -0.31
CUTA-208ENST00000482684 MYMXA0A1B0GTQ4 84 aa13.11□□□□□ -0.31
CUTA-208ENST00000482684 J3QQQ9 107 aa13.11□□□□□ -0.31
CUTA-208ENST00000482684 NDUFA12Q9UI09 145 aa13.11□□□□□ -0.31
CUTA-208ENST00000482684 DNAH11Q96DT5 4516 aa13.1□□□□□ -0.31
CUTA-208ENST00000482684 A0A096LNI7 61 aa13.1□□□□□ -0.31
CUTA-208ENST00000482684 NDUFC2-KCTD14E9PQ53 114 aa13.1□□□□□ -0.31
CUTA-208ENST00000482684 HERV-K104P63124 156 aa13.1□□□□□ -0.31
CUTA-208ENST00000482684 MAJINQ3KP22 176 aa13.1□□□□□ -0.31
CUTA-208ENST00000482684 ZNF625Q96I27 306 aaPredicted RBP13.1□□□□□ -0.31
CUTA-208ENST00000482684 HECTD4Q9Y4D8 3996 aa13.1□□□□□ -0.31
CUTA-208ENST00000482684 CHTF8P0CG12 524 aa13.09□□□□□ -0.31
CUTA-208ENST00000482684 NMUP48645 174 aa13.09□□□□□ -0.31
CUTA-208ENST00000482684 PTTG1IPP53801 180 aa13.09□□□□□ -0.31
CUTA-208ENST00000482684 Q6ZSA8 131 aa13.09□□□□□ -0.31
CUTA-208ENST00000482684 HSBP1L1C9JCN9 74 aa13.08□□□□□ -0.32
CUTA-208ENST00000482684 CDK2AP2O75956 126 aa13.08□□□□□ -0.32
CUTA-208ENST00000482684 GAGE2EQ4V326 116 aa13.08□□□□□ -0.32
CUTA-208ENST00000482684 GAGE2DQ9UEU5 116 aa13.08□□□□□ -0.32
CUTA-208ENST00000482684 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.08□□□□□ -0.32
CUTA-208ENST00000482684 PFN2P35080 140 aa13.07□□□□□ -0.32
CUTA-208ENST00000482684 Q6ZRP5 223 aa13.07□□□□□ -0.32
CUTA-208ENST00000482684 ERG28Q9UKR5 140 aa13.07□□□□□ -0.32
CUTA-208ENST00000482684 LINC00587B1AMM8 73 aa13.06□□□□□ -0.32
CUTA-208ENST00000482684 TSPEAR-AS2P59090 65 aa13.06□□□□□ -0.32
CUTA-208ENST00000482684 COX17Q14061 63 aa13.06□□□□□ -0.32
CUTA-208ENST00000482684 SPACA4Q8TDM5 124 aa13.06□□□□□ -0.32
CUTA-208ENST00000482684 CIRBPQ14011 172 aaKnown RBP13.05□□□□□ -0.32
CUTA-208ENST00000482684 MEIG1Q5JSS6 88 aa13.05□□□□□ -0.32
CUTA-208ENST00000482684 PANO1I0J062 215 aa13.04□□□□□ -0.32
CUTA-208ENST00000482684 XGP55808 180 aa13.03□□□□□ -0.32
CUTA-208ENST00000482684 LINC00158P58513 81 aa13.03□□□□□ -0.32
CUTA-208ENST00000482684 A0A087WYN8 130 aa13.02□□□□□ -0.33
CUTA-208ENST00000482684 HAMPP81172 84 aa13.02□□□□□ -0.33
CUTA-208ENST00000482684 ANKRD39Q53RE8 183 aa13.02□□□□□ -0.33
CUTA-208ENST00000482684 SCXQ7RTU7 201 aa13.02□□□□□ -0.33
CUTA-208ENST00000482684 CIRBP-AS1Q8TBR5 109 aa13.02□□□□□ -0.33
CUTA-208ENST00000482684 JOSD1Q15040 202 aaPredicted RBP13.01□□□□□ -0.33
CUTA-208ENST00000482684 IGKV2D-26A0A0A0MRZ7 120 aa13□□□□□ -0.33
CUTA-208ENST00000482684 EPPK1P58107 5090 aaKnown RBP12.99□□□□□ -0.33
CUTA-208ENST00000482684 PKHD1P08F94 4074 aa12.99□□□□□ -0.33
CUTA-208ENST00000482684 A0A0U1RRA0 63 aa12.99□□□□□ -0.33
CUTA-208ENST00000482684 ZNF815PA8K554 130 aa12.99□□□□□ -0.33
CUTA-208ENST00000482684 XAGE1AQ9HD64 81 aa12.99□□□□□ -0.33
CUTA-208ENST00000482684 SMIM13P0DJ93 91 aa12.98□□□□□ -0.33
CUTA-208ENST00000482684 PLAC8Q9NZF1 115 aa12.98□□□□□ -0.33
CUTA-208ENST00000482684 C9orf129Q5T035 196 aaKnown RBP12.96□□□□□ -0.33
CUTA-208ENST00000482684 A0A0J9YXY3 114 aa12.95□□□□□ -0.34
CUTA-208ENST00000482684 DNAH5Q8TE73 4624 aa12.95□□□□□ -0.34
CUTA-208ENST00000482684 A0A1W2PNN7 141 aa12.94□□□□□ -0.34
CUTA-208ENST00000482684 TTTY13Q9BZ97 58 aa12.94□□□□□ -0.34
CUTA-208ENST00000482684 SND1-IT1Q9HBX3 110 aa12.94□□□□□ -0.34
CUTA-208ENST00000482684 SCGB1D4Q6XE38 83 aa12.93□□□□□ -0.34
CUTA-208ENST00000482684 FAM19A5Q7Z5A7 132 aaPredicted RBP12.93□□□□□ -0.34
CUTA-208ENST00000482684 MIR7-3HGQ8N6C7 128 aa12.93□□□□□ -0.34
CUTA-208ENST00000482684 VAMP8Q9BV40 100 aa12.93□□□□□ -0.34
CUTA-208ENST00000482684 DYNC1H1Q14204 4646 aaKnown RBP12.93□□□□□ -0.34
CUTA-208ENST00000482684 SMR3BP02814 79 aaPredicted RBP12.92□□□□□ -0.34
CUTA-208ENST00000482684 FAM168BA1KXE4 195 aa12.91□□□□□ -0.34
CUTA-208ENST00000482684 PCP2Q8IVA1 136 aa12.91□□□□□ -0.34
CUTA-208ENST00000482684 PYY3Q5JQD4 70 aa12.9□□□□□ -0.34
CUTA-208ENST00000482684 C7orf33Q8WU49 177 aa12.9□□□□□ -0.34
CUTA-208ENST00000482684 TIMM17BO60830 172 aa12.89□□□□□ -0.35
CUTA-208ENST00000482684 PAM16Q9Y3D7 125 aa12.89□□□□□ -0.35
CUTA-208ENST00000482684 EPM2AB3EWF7 344 aa12.88□□□□□ -0.35
CUTA-208ENST00000482684 RPL24P83731 157 aaKnown RBP12.88□□□□□ -0.35
CUTA-208ENST00000482684 SPATA45Q537H7 98 aa12.88□□□□□ -0.35
CUTA-208ENST00000482684 MIEN1Q9BRT3 115 aa12.88□□□□□ -0.35
CUTA-208ENST00000482684 PLA2G2DQ9UNK4 145 aa12.88□□□□□ -0.35
CUTA-208ENST00000482684 FAM229AH3BQW9 127 aa12.87□□□□□ -0.35
CUTA-208ENST00000482684 M0QXV9 152 aa12.87□□□□□ -0.35
CUTA-208ENST00000482684 SERTAD4-AS1Q5TG53 156 aa12.87□□□□□ -0.35
CUTA-208ENST00000482684 DAND5Q8N907 189 aa12.87□□□□□ -0.35
CUTA-208ENST00000482684 NKAPP1Q8N9T2 125 aa12.87□□□□□ -0.35
CUTA-208ENST00000482684 LRP1BQ9NZR2 4599 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms