RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 PDE6GP18545 87 aa9.95□□□□□ -0.82
NR1H3-220ENST00000481020 LINC00612Q8N6U2 182 aa9.95□□□□□ -0.82
NR1H3-220ENST00000481020 LOC110117498A0A087WWA1 95 aa9.93□□□□□ -0.82
NR1H3-220ENST00000481020 WIPF1O43516 503 aa9.93□□□□□ -0.82
NR1H3-220ENST00000481020 A0A087WVE0 104 aa9.93□□□□□ -0.82
NR1H3-220ENST00000481020 IGKV3OR2-268A0A0C4DH90 116 aa9.93□□□□□ -0.82
NR1H3-220ENST00000481020 NANOS2P60321 138 aaKnown RBP9.93□□□□□ -0.82
NR1H3-220ENST00000481020 SLPIP03973 132 aa9.92□□□□□ -0.82
NR1H3-220ENST00000481020 KRTAP10-9P60411 292 aa9.92□□□□□ -0.82
NR1H3-220ENST00000481020 IGLV1-51P01701 117 aa9.91□□□□□ -0.82
NR1H3-220ENST00000481020 C19orf73Q9NVV2 129 aa9.91□□□□□ -0.82
NR1H3-220ENST00000481020 SVEP1Q4LDE5 3571 aa9.91□□□□□ -0.82
NR1H3-220ENST00000481020 UTP20O75691 2785 aaKnown RBP9.91□□□□□ -0.82
NR1H3-220ENST00000481020 SPG11Q96JI7 2443 aa9.91□□□□□ -0.82
NR1H3-220ENST00000481020 ZNF561-AS1K7EIQ3 104 aa9.9□□□□□ -0.82
NR1H3-220ENST00000481020 GHRHP01286 108 aa9.9□□□□□ -0.82
NR1H3-220ENST00000481020 CD164L2Q6UWJ8 174 aa9.9□□□□□ -0.82
NR1H3-220ENST00000481020 USP9YO00507 2555 aaPredicted RBP9.9□□□□□ -0.82
NR1H3-220ENST00000481020 CREBBPQ92793 2442 aa9.9□□□□□ -0.82
NR1H3-220ENST00000481020 MAPK1IP1LQ8NDC0 245 aa9.9□□□□□ -0.83
NR1H3-220ENST00000481020 CELSR1Q9NYQ6 3014 aa9.89□□□□□ -0.83
NR1H3-220ENST00000481020 LINC00575Q6W349 94 aa9.89□□□□□ -0.83
NR1H3-220ENST00000481020 CYSTM1Q9H1C7 97 aa9.89□□□□□ -0.83
NR1H3-220ENST00000481020 XCL1P47992 114 aa9.88□□□□□ -0.83
NR1H3-220ENST00000481020 KIAA0087Q14695 138 aa9.88□□□□□ -0.83
NR1H3-220ENST00000481020 DEFB113Q30KQ7 82 aa9.88□□□□□ -0.83
NR1H3-220ENST00000481020 RBM3P98179 157 aaKnown RBP9.87□□□□□ -0.83
NR1H3-220ENST00000481020 C6orf223Q8N319 242 aa9.87□□□□□ -0.83
NR1H3-220ENST00000481020 CSPG4Q6UVK1 2322 aa9.87□□□□□ -0.83
NR1H3-220ENST00000481020 TRAV7A0A075B6U4 112 aa9.87□□□□□ -0.83
NR1H3-220ENST00000481020 Q6ZQT0 140 aa9.87□□□□□ -0.83
NR1H3-220ENST00000481020 C16orf95Q9H693 158 aa9.87□□□□□ -0.83
NR1H3-220ENST00000481020 PRO0255Q9UI72 69 aa9.87□□□□□ -0.83
NR1H3-220ENST00000481020 C9orf66Q5T8R8 295 aa9.86□□□□□ -0.83
NR1H3-220ENST00000481020 DNAJC9-AS1A6NH13 148 aa9.85□□□□□ -0.83
NR1H3-220ENST00000481020 GYPEP15421 78 aa9.85□□□□□ -0.83
NR1H3-220ENST00000481020 CXCL6P80162 114 aa9.85□□□□□ -0.83
NR1H3-220ENST00000481020 ENHOQ6UWT2 76 aa9.85□□□□□ -0.83
NR1H3-220ENST00000481020 PTPN13Q12923 2485 aa9.85□□□□□ -0.83
NR1H3-220ENST00000481020 FBN2P35556 2912 aa9.85□□□□□ -0.83
NR1H3-220ENST00000481020 RPL35AP18077 110 aaKnown RBP9.85□□□□□ -0.83
NR1H3-220ENST00000481020 C6orf99Q4VX62 202 aa9.84□□□□□ -0.83
NR1H3-220ENST00000481020 TENM4Q6N022 2769 aa9.83□□□□□ -0.84
NR1H3-220ENST00000481020 TRAV23DV6A0A075B6W5 121 aa9.82□□□□□ -0.84
NR1H3-220ENST00000481020 EPM2AB3EWF7 344 aa9.82□□□□□ -0.84
NR1H3-220ENST00000481020 KLKP1Q107X0 134 aa9.82□□□□□ -0.84
NR1H3-220ENST00000481020 LINC00482Q8N8I6 264 aa9.82□□□□□ -0.84
NR1H3-220ENST00000481020 C11orf68Q9H3H3 251 aaKnown RBP9.82□□□□□ -0.84
NR1H3-220ENST00000481020 HILS1P60008 231 aa9.82□□□□□ -0.84
NR1H3-220ENST00000481020 FAM19A1Q7Z5A9 133 aa9.82□□□□□ -0.84
NR1H3-220ENST00000481020 DSCR8Q96T75 97 aa9.82□□□□□ -0.84
NR1H3-220ENST00000481020 CRYBG3Q68DQ2 2970 aa9.81□□□□□ -0.84
NR1H3-220ENST00000481020 ZFHX3Q15911 3703 aa9.81□□□□□ -0.84
NR1H3-220ENST00000481020 A0A0J9YWU9 116 aa9.81□□□□□ -0.84
NR1H3-220ENST00000481020 FAM236DA0A1B0GTK5 79 aa9.81□□□□□ -0.84
NR1H3-220ENST00000481020 LYRM9A8MSI8 78 aa9.81□□□□□ -0.84
NR1H3-220ENST00000481020 NDUFC1O43677 76 aa9.81□□□□□ -0.84
NR1H3-220ENST00000481020 IGHV4-30-4P0DP06 118 aa9.81□□□□□ -0.84
NR1H3-220ENST00000481020 FAM236CP0DP71 79 aa9.81□□□□□ -0.84
NR1H3-220ENST00000481020 CHCHD10Q8WYQ3 142 aaPredicted RBP9.81□□□□□ -0.84
NR1H3-220ENST00000481020 SERP1Q9Y6X1 66 aa9.81□□□□□ -0.84
NR1H3-220ENST00000481020 POLQO75417 2590 aa9.81□□□□□ -0.84
NR1H3-220ENST00000481020 ANKRD17O75179 2603 aaKnown RBP9.81□□□□□ -0.84
NR1H3-220ENST00000481020 IGLV6-57P01721 117 aa9.8□□□□□ -0.84
NR1H3-220ENST00000481020 CR1P17927 2039 aa9.8□□□□□ -0.84
NR1H3-220ENST00000481020 NAV2Q8IVL1 2488 aa9.8□□□□□ -0.84
NR1H3-220ENST00000481020 HELZ2Q9BYK8 2649 aaKnown RBP9.79□□□□□ -0.84
NR1H3-220ENST00000481020 TRBV7-6A0A0J9YX20 115 aa9.79□□□□□ -0.84
NR1H3-220ENST00000481020 LINC01547P58512 204 aaPredicted RBP9.79□□□□□ -0.84
NR1H3-220ENST00000481020 ABCA12Q86UK0 2595 aa9.79□□□□□ -0.84
NR1H3-220ENST00000481020 CENPEQ02224 2701 aa9.79□□□□□ -0.84
NR1H3-220ENST00000481020 GVQW2A0A096LPI5 108 aaPredicted RBP9.79□□□□□ -0.84
NR1H3-220ENST00000481020 DEFB130BP0DP73 79 aa9.79□□□□□ -0.84
NR1H3-220ENST00000481020 DEFB130AP0DP74 79 aa9.79□□□□□ -0.84
NR1H3-220ENST00000481020 KRTAP1-3Q8IUG1 177 aa9.79□□□□□ -0.84
NR1H3-220ENST00000481020 ATP5EP56381 51 aaPredicted RBP9.78□□□□□ -0.84
NR1H3-220ENST00000481020 Q5XG85 94 aa9.78□□□□□ -0.84
NR1H3-220ENST00000481020 C20orf197Q8N268 126 aa9.78□□□□□ -0.84
NR1H3-220ENST00000481020 LAMTOR3Q9UHA4 124 aa9.78□□□□□ -0.84
NR1H3-220ENST00000481020 CELSR2Q9HCU4 2923 aa9.78□□□□□ -0.84
NR1H3-220ENST00000481020 OXTP01178 125 aa9.77□□□□□ -0.85
NR1H3-220ENST00000481020 RNASE1P07998 156 aaKnown RBP9.77□□□□□ -0.85
NR1H3-220ENST00000481020 PRR3P79522 188 aaKnown RBP9.77□□□□□ -0.85
NR1H3-220ENST00000481020 REG3AQ06141 175 aa9.77□□□□□ -0.85
NR1H3-220ENST00000481020 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.77□□□□□ -0.85
NR1H3-220ENST00000481020 Q6ZVQ6 151 aa9.77□□□□□ -0.85
NR1H3-220ENST00000481020 LINC00269Q8N2A0 174 aa9.77□□□□□ -0.85
NR1H3-220ENST00000481020 WFDC10AQ9H1F0 79 aa9.77□□□□□ -0.85
NR1H3-220ENST00000481020 FASNP49327 2511 aaKnown RBP9.77□□□□□ -0.85
NR1H3-220ENST00000481020 VPS13CQ709C8 3753 aa9.77□□□□□ -0.85
NR1H3-220ENST00000481020 LINC01006Q8NI28 216 aa9.76□□□□□ -0.85
NR1H3-220ENST00000481020 H7BZZ5 65 aa9.76□□□□□ -0.85
NR1H3-220ENST00000481020 WFDC9Q8NEX5 89 aa9.74□□□□□ -0.85
NR1H3-220ENST00000481020 MRAPQ8TCY5 172 aa9.74□□□□□ -0.85
NR1H3-220ENST00000481020 CSMD2Q7Z408 3487 aa9.74□□□□□ -0.85
NR1H3-220ENST00000481020 APCP25054 2843 aa9.74□□□□□ -0.85
NR1H3-220ENST00000481020 TRBV7-4A0A0J9YYF1 115 aa9.73□□□□□ -0.85
NR1H3-220ENST00000481020 ERC2-IT1O76042 136 aa9.73□□□□□ -0.85
NR1H3-220ENST00000481020 ANGP03950 147 aaKnown RBP9.73□□□□□ -0.85
NR1H3-220ENST00000481020 DIRC1Q969H9 104 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms