RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 IGHV1-58A0A0C4DH39 117 aa7.98□□□□□ -1.13
PTPRF-213ENST00000481019 LEPROTO15243 131 aa7.98□□□□□ -1.13
PTPRF-213ENST00000481019 DLEU1O43261 78 aa7.98□□□□□ -1.13
PTPRF-213ENST00000481019 NMUP48645 174 aa7.98□□□□□ -1.13
PTPRF-213ENST00000481019 SLC25A34Q6PIV7 304 aa7.98□□□□□ -1.13
PTPRF-213ENST00000481019 SFTA2Q6UW10 78 aa7.98□□□□□ -1.13
PTPRF-213ENST00000481019 CHCHD10Q8WYQ3 142 aaPredicted RBP7.98□□□□□ -1.13
PTPRF-213ENST00000481019 CDKN2A-AS1Q9UH64 79 aa7.98□□□□□ -1.13
PTPRF-213ENST00000481019 IGHV3OR16-9A0A0B4J2B5 98 aa7.97□□□□□ -1.13
PTPRF-213ENST00000481019 COX7A2LO14548 114 aa7.97□□□□□ -1.13
PTPRF-213ENST00000481019 COX8AP10176 69 aa7.97□□□□□ -1.13
PTPRF-213ENST00000481019 LGALS3P17931 250 aaKnown RBP7.97□□□□□ -1.13
PTPRF-213ENST00000481019 MALP21145 153 aa7.97□□□□□ -1.13
PTPRF-213ENST00000481019 XCL1P47992 114 aa7.97□□□□□ -1.13
PTPRF-213ENST00000481019 GAGE12HA6NDE8 117 aa7.96□□□□□ -1.14
PTPRF-213ENST00000481019 COX6A2Q02221 97 aa7.96□□□□□ -1.14
PTPRF-213ENST00000481019 MAJINQ3KP22 176 aa7.96□□□□□ -1.14
PTPRF-213ENST00000481019 ANKRD39Q53RE8 183 aa7.96□□□□□ -1.14
PTPRF-213ENST00000481019 MIEN1Q9BRT3 115 aa7.96□□□□□ -1.14
PTPRF-213ENST00000481019 J3QQQ9 107 aa7.95□□□□□ -1.14
PTPRF-213ENST00000481019 CFAP161Q6P656 301 aa7.95□□□□□ -1.14
PTPRF-213ENST00000481019 IGLV5-39A0A0G2JS06 123 aa7.94□□□□□ -1.14
PTPRF-213ENST00000481019 LINC00587B1AMM8 73 aa7.94□□□□□ -1.14
PTPRF-213ENST00000481019 PRSS2P07478 247 aa7.94□□□□□ -1.14
PTPRF-213ENST00000481019 BOD1L2Q8IYS8 172 aa7.94□□□□□ -1.14
PTPRF-213ENST00000481019 C14orf144Q96I85 54 aa7.94□□□□□ -1.14
PTPRF-213ENST00000481019 MYMXA0A1B0GTQ4 84 aa7.93□□□□□ -1.14
PTPRF-213ENST00000481019 SLPIP03973 132 aa7.93□□□□□ -1.14
PTPRF-213ENST00000481019 SPINK8P0C7L1 97 aa7.93□□□□□ -1.14
PTPRF-213ENST00000481019 FOXI1Q12951 378 aa7.93□□□□□ -1.14
PTPRF-213ENST00000481019 C6orf226Q5I0X4 101 aa7.93□□□□□ -1.14
PTPRF-213ENST00000481019 C5orf38Q86SI9 138 aa7.93□□□□□ -1.14
PTPRF-213ENST00000481019 C15orf56Q8N910 161 aa7.93□□□□□ -1.14
PTPRF-213ENST00000481019 PRO1933Q9H354 126 aa7.93□□□□□ -1.14
PTPRF-213ENST00000481019 SMIM1B2RUZ4 78 aa7.92□□□□□ -1.14
PTPRF-213ENST00000481019 CXCL5P42830 114 aa7.92□□□□□ -1.14
PTPRF-213ENST00000481019 HERV-K104P63124 156 aa7.92□□□□□ -1.14
PTPRF-213ENST00000481019 CIRBPQ14011 172 aaKnown RBP7.92□□□□□ -1.14
PTPRF-213ENST00000481019 ZNF815PA8K554 130 aa7.91□□□□□ -1.14
PTPRF-213ENST00000481019 F8WDY8 70 aa7.91□□□□□ -1.14
PTPRF-213ENST00000481019 HNRNPA3P51991 378 aaKnown RBP7.91□□□□□ -1.14
PTPRF-213ENST00000481019 SCGB1D4Q6XE38 83 aa7.91□□□□□ -1.14
PTPRF-213ENST00000481019 Q6ZSA8 131 aa7.91□□□□□ -1.14
PTPRF-213ENST00000481019 Q8IZM0 81 aa7.91□□□□□ -1.14
PTPRF-213ENST00000481019 COX7B2Q8TF08 81 aa7.91□□□□□ -1.14
PTPRF-213ENST00000481019 NDUFA12Q9UI09 145 aa7.91□□□□□ -1.14
PTPRF-213ENST00000481019 IGHV3-64A0A075B6Q5 118 aa7.9□□□□□ -1.14
PTPRF-213ENST00000481019 IGKV2D-26A0A0A0MRZ7 120 aa7.9□□□□□ -1.14
PTPRF-213ENST00000481019 SMR3BP02814 79 aaPredicted RBP7.9□□□□□ -1.14
PTPRF-213ENST00000481019 DDTP30046 118 aa7.9□□□□□ -1.14
PTPRF-213ENST00000481019 C14orf177Q52M58 125 aa7.9□□□□□ -1.14
PTPRF-213ENST00000481019 PCP2Q8IVA1 136 aa7.9□□□□□ -1.14
PTPRF-213ENST00000481019 Q8N1X5 172 aa7.9□□□□□ -1.14
PTPRF-213ENST00000481019 HIGD1BQ9P298 99 aa7.9□□□□□ -1.14
PTPRF-213ENST00000481019 SRRM2Q9UQ35 2752 aaKnown RBP7.89□□□□□ -1.15
PTPRF-213ENST00000481019 NDUFA1O15239 70 aa7.89□□□□□ -1.15
PTPRF-213ENST00000481019 CKS1BP61024 79 aa7.89□□□□□ -1.15
PTPRF-213ENST00000481019 HIGD2BQ4VC39 106 aa7.89□□□□□ -1.15
PTPRF-213ENST00000481019 COPS9Q8WXC6 57 aa7.89□□□□□ -1.15
PTPRF-213ENST00000481019 TOMM7Q9P0U1 55 aa7.89□□□□□ -1.15
PTPRF-213ENST00000481019 PKHD1L1Q86WI1 4243 aa7.89□□□□□ -1.15
PTPRF-213ENST00000481019 PANO1I0J062 215 aa7.88□□□□□ -1.15
PTPRF-213ENST00000481019 ZNF561-AS1K7EIQ3 104 aa7.88□□□□□ -1.15
PTPRF-213ENST00000481019 ORAOV1Q8WV07 137 aa7.88□□□□□ -1.15
PTPRF-213ENST00000481019 LINC00526Q96FQ7 95 aa7.88□□□□□ -1.15
PTPRF-213ENST00000481019 PCP4L1A6NKN8 68 aa7.87□□□□□ -1.15
PTPRF-213ENST00000481019 TMEM238C9JI98 176 aa7.87□□□□□ -1.15
PTPRF-213ENST00000481019 Q6ZVH6 145 aa7.87□□□□□ -1.15
PTPRF-213ENST00000481019 C9orf163Q8N9P6 203 aa7.87□□□□□ -1.15
PTPRF-213ENST00000481019 TIMM17BO60830 172 aa7.86□□□□□ -1.15
PTPRF-213ENST00000481019 CNBPP62633 177 aaKnown RBP7.86□□□□□ -1.15
PTPRF-213ENST00000481019 TAL2Q16559 108 aa7.86□□□□□ -1.15
PTPRF-213ENST00000481019 MYCBP2O75592 4640 aa7.86□□□□□ -1.15
PTPRF-213ENST00000481019 GVQW2A0A096LPI5 108 aaPredicted RBP7.85□□□□□ -1.15
PTPRF-213ENST00000481019 SPAG11BQ08648 103 aa7.85□□□□□ -1.15
PTPRF-213ENST00000481019 SRSF9Q13242 221 aaKnown RBP eCLIP7.85□□□□□ -1.15
PTPRF-213ENST00000481019 SDIM1Q6ZPB5 146 aa7.85□□□□□ -1.15
PTPRF-213ENST00000481019 SCXQ7RTU7 201 aa7.85□□□□□ -1.15
PTPRF-213ENST00000481019 C2orf48Q96LS8 159 aa7.85□□□□□ -1.15
PTPRF-213ENST00000481019 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.85□□□□□ -1.15
PTPRF-213ENST00000481019 M0R143 59 aa7.84□□□□□ -1.15
PTPRF-213ENST00000481019 TSPEAR-AS2P59090 65 aa7.84□□□□□ -1.15
PTPRF-213ENST00000481019 COX17Q14061 63 aa7.84□□□□□ -1.15
PTPRF-213ENST00000481019 SPANXB1Q9NS25 103 aaPredicted RBP7.84□□□□□ -1.15
PTPRF-213ENST00000481019 A0A0J9YXY3 114 aa7.83□□□□□ -1.16
PTPRF-213ENST00000481019 HSD52Q0P140 79 aa7.83□□□□□ -1.16
PTPRF-213ENST00000481019 MEIG1Q5JSS6 88 aa7.83□□□□□ -1.16
PTPRF-213ENST00000481019 Q5VSD8 79 aa7.83□□□□□ -1.16
PTPRF-213ENST00000481019 CIRBP-AS1Q8TBR5 109 aa7.83□□□□□ -1.16
PTPRF-213ENST00000481019 ZNF625Q96I27 306 aaPredicted RBP7.83□□□□□ -1.16
PTPRF-213ENST00000481019 HIST1H4GQ99525 98 aa7.83□□□□□ -1.16
PTPRF-213ENST00000481019 TTTY13Q9BZ97 58 aa7.83□□□□□ -1.16
PTPRF-213ENST00000481019 CHTF8P0CG12 524 aa7.82□□□□□ -1.16
PTPRF-213ENST00000481019 IFITM1P13164 125 aa7.82□□□□□ -1.16
PTPRF-213ENST00000481019 CTAG1AP78358 180 aa7.82□□□□□ -1.16
PTPRF-213ENST00000481019 KIAA0087Q14695 138 aa7.82□□□□□ -1.16
PTPRF-213ENST00000481019 TRBV30A0A0K0K1B3 111 aa7.81□□□□□ -1.16
PTPRF-213ENST00000481019 TMEM238LA0A1B0GVL6 79 aa7.81□□□□□ -1.16
PTPRF-213ENST00000481019 A6NJY4 79 aa7.81□□□□□ -1.16
PTPRF-213ENST00000481019 EPM2AB3EWF7 344 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 185.7 ms