RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 S100A8P05109 93 aa9.25□□□□□ -0.93
DDX56-210ENST00000479440 CXCL5P42830 114 aa9.24□□□□□ -0.93
DDX56-210ENST00000479440 GAGE10A6NGK3 116 aa9.23□□□□□ -0.93
DDX56-210ENST00000479440 SMIM27A0A1W2PRY6 76 aa9.22□□□□□ -0.93
DDX56-210ENST00000479440 FP248Q71RG6 208 aaPredicted RBP9.22□□□□□ -0.93
DDX56-210ENST00000479440 LINC00337Q8N6G1 96 aa9.22□□□□□ -0.93
DDX56-210ENST00000479440 PNRC1Q12796 327 aaPredicted RBP9.21□□□□□ -0.94
DDX56-210ENST00000479440 ASB16-AS1Q495Z4 193 aa9.21□□□□□ -0.94
DDX56-210ENST00000479440 ORMDL3Q8N138 153 aa9.21□□□□□ -0.94
DDX56-210ENST00000479440 NKAPP1Q8N9T2 125 aa9.21□□□□□ -0.94
DDX56-210ENST00000479440 HERVK_113P63121 156 aa9.2□□□□□ -0.94
DDX56-210ENST00000479440 SEC11AP67812 179 aa9.2□□□□□ -0.94
DDX56-210ENST00000479440 SRSF3P84103 164 aaKnown RBP9.2□□□□□ -0.94
DDX56-210ENST00000479440 MRPL54Q6P161 138 aaKnown RBP9.2□□□□□ -0.94
DDX56-210ENST00000479440 AMELXQ99217 191 aa9.2□□□□□ -0.94
DDX56-210ENST00000479440 VCX2Q9H322 139 aa9.2□□□□□ -0.94
DDX56-210ENST00000479440 CYSLTR1Q9Y271 337 aa9.2□□□□□ -0.94
DDX56-210ENST00000479440 IGLV5-37A0A075B6J1 123 aa9.19□□□□□ -0.94
DDX56-210ENST00000479440 ADIRFQ15847 76 aa9.19□□□□□ -0.94
DDX56-210ENST00000479440 SPAG11AQ6PDA7 123 aa9.19□□□□□ -0.94
DDX56-210ENST00000479440 ALKAL2Q6UX46 152 aa9.19□□□□□ -0.94
DDX56-210ENST00000479440 FAM19A3Q7Z5A8 133 aa9.19□□□□□ -0.94
DDX56-210ENST00000479440 TCTE3Q8IZS6 198 aa9.19□□□□□ -0.94
DDX56-210ENST00000479440 SRP19P09132 144 aaKnown RBP9.18□□□□□ -0.94
DDX56-210ENST00000479440 NPSP0C0P6 89 aa9.18□□□□□ -0.94
DDX56-210ENST00000479440 RPL23P62829 140 aaKnown RBP9.18□□□□□ -0.94
DDX56-210ENST00000479440 PRELID3AQ96N28 172 aa9.18□□□□□ -0.94
DDX56-210ENST00000479440 A0A1B0GXF2 115 aa9.17□□□□□ -0.94
DDX56-210ENST00000479440 ZC2HC1BQ5TFG8 222 aa9.17□□□□□ -0.94
DDX56-210ENST00000479440 C2orf66Q6UXQ4 117 aa9.17□□□□□ -0.94
DDX56-210ENST00000479440 IGKV2-28A0A075B6P5 120 aa9.16□□□□□ -0.94
DDX56-210ENST00000479440 IGKV2D-28P01615 120 aa9.16□□□□□ -0.94
DDX56-210ENST00000479440 SEC61BP60468 96 aaKnown RBP9.16□□□□□ -0.94
DDX56-210ENST00000479440 PRLHP81277 87 aa9.16□□□□□ -0.94
DDX56-210ENST00000479440 TMEM136Q6ZRR5 245 aa9.16□□□□□ -0.94
DDX56-210ENST00000479440 MAP1LC3AQ9H492 121 aa9.16□□□□□ -0.94
DDX56-210ENST00000479440 GEMIN7Q9H840 131 aaKnown RBP9.16□□□□□ -0.94
DDX56-210ENST00000479440 CDKN2A-AS1Q9UH64 79 aa9.16□□□□□ -0.94
DDX56-210ENST00000479440 KRTAP13-3Q3SY46 172 aa9.15□□□□□ -0.94
DDX56-210ENST00000479440 PAPPA-AS1Q5QFB9 102 aa9.15□□□□□ -0.94
DDX56-210ENST00000479440 FAM19A1Q7Z5A9 133 aa9.15□□□□□ -0.94
DDX56-210ENST00000479440 C3orf22Q8N5N4 141 aa9.15□□□□□ -0.94
DDX56-210ENST00000479440 LAMTOR2Q9Y2Q5 125 aa9.15□□□□□ -0.94
DDX56-210ENST00000479440 NAT8Q9UHE5 227 aa9.14□□□□□ -0.95
DDX56-210ENST00000479440 LOC389332A0A1B0GUA5 103 aa9.13□□□□□ -0.95
DDX56-210ENST00000479440 PRSS47A8MTI9 375 aa9.13□□□□□ -0.95
DDX56-210ENST00000479440 ORMDL2Q53FV1 153 aa9.13□□□□□ -0.95
DDX56-210ENST00000479440 C4orf48Q5BLP8 95 aa9.12□□□□□ -0.95
DDX56-210ENST00000479440 SMIM1B2RUZ4 78 aa9.11□□□□□ -0.95
DDX56-210ENST00000479440 ATP5L2Q7Z4Y8 100 aa9.11□□□□□ -0.95
DDX56-210ENST00000479440 Q8N8P6 123 aa9.11□□□□□ -0.95
DDX56-210ENST00000479440 COX7B2Q8TF08 81 aa9.11□□□□□ -0.95
DDX56-210ENST00000479440 KRTAP4-1Q9BYQ7 146 aa9.11□□□□□ -0.95
DDX56-210ENST00000479440 TMEM126AQ9H061 195 aa9.11□□□□□ -0.95
DDX56-210ENST00000479440 IGIPA6NJ69 53 aa9.1□□□□□ -0.95
DDX56-210ENST00000479440 K7EMI3 77 aa9.1□□□□□ -0.95
DDX56-210ENST00000479440 PDZD11Q5EBL8 140 aa9.1□□□□□ -0.95
DDX56-210ENST00000479440 PLEKHB2Q96CS7 222 aa9.1□□□□□ -0.95
DDX56-210ENST00000479440 GNB1LQ9BYB4 327 aa9.1□□□□□ -0.95
DDX56-210ENST00000479440 SCO1O75880 301 aa9.09□□□□□ -0.95
DDX56-210ENST00000479440 RAB5BP61020 215 aa9.09□□□□□ -0.95
DDX56-210ENST00000479440 CBLN2Q8IUK8 224 aa9.08□□□□□ -0.96
DDX56-210ENST00000479440 TMEM238C9JI98 176 aa9.07□□□□□ -0.96
DDX56-210ENST00000479440 TIMM17AQ99595 171 aa9.07□□□□□ -0.96
DDX56-210ENST00000479440 NDUFA12Q9UI09 145 aa9.07□□□□□ -0.96
DDX56-210ENST00000479440 A0A1B0GVG6 124 aa9.06□□□□□ -0.96
DDX56-210ENST00000479440 G0S2P27469 103 aa9.06□□□□□ -0.96
DDX56-210ENST00000479440 HIGD2AQ9BW72 106 aa9.06□□□□□ -0.96
DDX56-210ENST00000479440 ZNF706Q9Y5V0 76 aaPredicted RBP9.06□□□□□ -0.96
DDX56-210ENST00000479440 M0R378 163 aa9.05□□□□□ -0.96
DDX56-210ENST00000479440 ATP5LO75964 103 aa9.05□□□□□ -0.96
DDX56-210ENST00000479440 DAND5Q8N907 189 aa9.05□□□□□ -0.96
DDX56-210ENST00000479440 VPREB1P12018 145 aa9.04□□□□□ -0.96
DDX56-210ENST00000479440 RPL24P83731 157 aaKnown RBP9.04□□□□□ -0.96
DDX56-210ENST00000479440 Q8NBF4 154 aa9.04□□□□□ -0.96
DDX56-210ENST00000479440 SPRR4Q96PI1 79 aa9.04□□□□□ -0.96
DDX56-210ENST00000479440 NXT2Q9NPJ8 142 aaKnown RBP9.04□□□□□ -0.96
DDX56-210ENST00000479440 IGLV5-45A0A087WSX0 123 aa9.03□□□□□ -0.96
DDX56-210ENST00000479440 TINCRA0A1B0GVN0 87 aa9.03□□□□□ -0.96
DDX56-210ENST00000479440 SPINK1P00995 79 aa9.03□□□□□ -0.96
DDX56-210ENST00000479440 CFC1BP0CG36 223 aa9.03□□□□□ -0.96
DDX56-210ENST00000479440 FAM19A2Q8N3H0 131 aa9.02□□□□□ -0.97
DDX56-210ENST00000479440 TOMM6Q96B49 74 aa9.02□□□□□ -0.97
DDX56-210ENST00000479440 SPINK8P0C7L1 97 aa9.01□□□□□ -0.97
DDX56-210ENST00000479440 PFN2P35080 140 aa9.01□□□□□ -0.97
DDX56-210ENST00000479440 C9JQL5 133 aa9□□□□□ -0.97
DDX56-210ENST00000479440 PEA15Q15121 130 aa9□□□□□ -0.97
DDX56-210ENST00000479440 ERASQ7Z444 233 aa8.99□□□□□ -0.97
DDX56-210ENST00000479440 SND1-IT1Q9HBX3 110 aa8.99□□□□□ -0.97
DDX56-210ENST00000479440 XP32Q5T750 250 aa8.98□□□□□ -0.97
DDX56-210ENST00000479440 LCE2CQ5TA81 110 aa8.98□□□□□ -0.97
DDX56-210ENST00000479440 AKAP14Q86UN6 197 aa8.98□□□□□ -0.97
DDX56-210ENST00000479440 SCGB3A1Q96QR1 104 aa8.98□□□□□ -0.97
DDX56-210ENST00000479440 H3BRM9 83 aa8.97□□□□□ -0.97
DDX56-210ENST00000479440 MRPL18Q9H0U6 180 aaKnown RBP8.97□□□□□ -0.97
DDX56-210ENST00000479440 RAB14P61106 215 aa8.96□□□□□ -0.98
DDX56-210ENST00000479440 RPS29P62273 56 aaKnown RBP8.96□□□□□ -0.98
DDX56-210ENST00000479440 ERG28Q9UKR5 140 aa8.96□□□□□ -0.98
DDX56-210ENST00000479440 LINC01549A6NIU2 74 aa8.95□□□□□ -0.98
DDX56-210ENST00000479440 MT1HP80294 61 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms