RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 INSP01308 110 aa1.45□□□□□ -2.18
XRN1-211ENST00000477237 ARL14EPLP0DKL9 152 aa1.45□□□□□ -2.18
XRN1-211ENST00000477237 KRTAP25-1Q3LHN0 102 aa1.45□□□□□ -2.18
XRN1-211ENST00000477237 C1orf137Q5JT78 98 aa1.45□□□□□ -2.18
XRN1-211ENST00000477237 SPANXN5Q5MJ07 72 aa1.45□□□□□ -2.18
XRN1-211ENST00000477237 HCP5Q6MZN7 132 aa1.45□□□□□ -2.18
XRN1-211ENST00000477237 SPANXA2-OT1Q8N9U9 137 aa1.45□□□□□ -2.18
XRN1-211ENST00000477237 TMEM167BQ9NRX6 74 aa1.45□□□□□ -2.18
XRN1-211ENST00000477237 ORMDL1Q9P0S3 153 aa1.45□□□□□ -2.18
XRN1-211ENST00000477237 TMEM14CQ9P0S9 112 aa1.45□□□□□ -2.18
XRN1-211ENST00000477237 CABIN1Q9Y6J0 2220 aa1.45□□□□□ -2.18
XRN1-211ENST00000477237 SSC5DA1L4H1 1573 aa1.45□□□□□ -2.18
XRN1-211ENST00000477237 CR1P17927 2039 aa1.45□□□□□ -2.18
XRN1-211ENST00000477237 COL4A5P29400 1685 aa1.45□□□□□ -2.18
XRN1-211ENST00000477237 CEP192Q8TEP8 1941 aa1.44□□□□□ -2.18
XRN1-211ENST00000477237 ARFGEF3Q5TH69 2177 aa1.44□□□□□ -2.18
XRN1-211ENST00000477237 LRCOL1A6NCL2 159 aa1.44□□□□□ -2.18
XRN1-211ENST00000477237 NUPR2A6NF83 97 aa1.44□□□□□ -2.18
XRN1-211ENST00000477237 M0R135 149 aa1.44□□□□□ -2.18
XRN1-211ENST00000477237 M0R1W7 72 aa1.44□□□□□ -2.18
XRN1-211ENST00000477237 LINC00322Q6ZN03 302 aaPredicted RBP1.44□□□□□ -2.18
XRN1-211ENST00000477237 C14orf178Q8N769 122 aaPredicted RBP1.44□□□□□ -2.18
XRN1-211ENST00000477237 COX7B2Q8TF08 81 aa1.44□□□□□ -2.18
XRN1-211ENST00000477237 ZNRD1Q9P1U0 126 aa1.44□□□□□ -2.18
XRN1-211ENST00000477237 TIMM8BQ9Y5J9 83 aaPredicted RBP1.44□□□□□ -2.18
XRN1-211ENST00000477237 ESPL1Q14674 2120 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 ZGRF1Q86YA3 2104 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 MED12Q93074 2177 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 IGKV3-7A0A075B6H7 116 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 IGHV3-64DA0A0J9YX35 117 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 TRBV6-1A0A0K0K1D8 114 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 NDUFB1O75438 58 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 PPP1R17O96001 155 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 IGLV3-19P01714 112 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 ZNF137PP52743 207 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 CCL18P55774 89 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 SPINK7P58062 85 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 TFF3Q07654 80 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 SPAG11BQ08648 103 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 SPAG11AQ6PDA7 123 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 LYPD1Q8N2G4 141 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 WFDC9Q8NEX5 89 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 DMAC1Q96GE9 116 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 LINC00208Q96KT6 92 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 UBL5Q9BZL1 73 aa1.43□□□□□ -2.18
XRN1-211ENST00000477237 KIAA0100Q14667 2235 aaKnown RBP1.43□□□□□ -2.18
XRN1-211ENST00000477237 MDC1Q14676 2089 aaKnown RBP1.43□□□□□ -2.18
XRN1-211ENST00000477237 SDK2Q58EX2 2172 aa1.42□□□□□ -2.18
XRN1-211ENST00000477237 SPRR5A0A1B0GTR4 108 aa1.42□□□□□ -2.18
XRN1-211ENST00000477237 A0A1B0GU33 70 aa1.42□□□□□ -2.18
XRN1-211ENST00000477237 M0R3E3 92 aa1.42□□□□□ -2.18
XRN1-211ENST00000477237 NDUFA3O95167 84 aa1.42□□□□□ -2.18
XRN1-211ENST00000477237 PDE6GP18545 87 aa1.42□□□□□ -2.18
XRN1-211ENST00000477237 DEFB114Q30KQ6 69 aa1.42□□□□□ -2.18
XRN1-211ENST00000477237 Q5W150 140 aa1.42□□□□□ -2.18
XRN1-211ENST00000477237 C9orf163Q8N9P6 203 aa1.42□□□□□ -2.18
XRN1-211ENST00000477237 C16orf74Q96GX8 76 aa1.42□□□□□ -2.18
XRN1-211ENST00000477237 ZNF625Q96I27 306 aaPredicted RBP1.42□□□□□ -2.18
XRN1-211ENST00000477237 SPRR4Q96PI1 79 aa1.42□□□□□ -2.18
XRN1-211ENST00000477237 HIGD2AQ9BW72 106 aa1.42□□□□□ -2.18
XRN1-211ENST00000477237 MINOS1-NBL1R4GNA1 71 aa1.42□□□□□ -2.18
XRN1-211ENST00000477237 DNAJC13O75165 2243 aa1.42□□□□□ -2.18
XRN1-211ENST00000477237 COL27A1Q8IZC6 1860 aaPredicted RBP1.41□□□□□ -2.18
XRN1-211ENST00000477237 IGLV4-69A0A075B6H9 119 aa1.41□□□□□ -2.18
XRN1-211ENST00000477237 IGHV3-64A0A075B6Q5 118 aa1.41□□□□□ -2.18
XRN1-211ENST00000477237 LOC110117498A0A087WWA1 95 aa1.41□□□□□ -2.18
XRN1-211ENST00000477237 JMJD7-PLA2G4BH0Y9G9 81 aa1.41□□□□□ -2.18
XRN1-211ENST00000477237 H0Y9P7 68 aa1.41□□□□□ -2.18
XRN1-211ENST00000477237 IGHV3-53P01767 116 aa1.41□□□□□ -2.18
XRN1-211ENST00000477237 FREM3P0C091 2139 aa1.41□□□□□ -2.18
XRN1-211ENST00000477237 CCL3L1P16619 93 aa1.41□□□□□ -2.18
XRN1-211ENST00000477237 ERHP84090 104 aaKnown RBP1.41□□□□□ -2.18
XRN1-211ENST00000477237 LINC01590Q5TEZ4 76 aa1.41□□□□□ -2.18
XRN1-211ENST00000477237 SPATA8Q6RVD6 105 aa1.41□□□□□ -2.18
XRN1-211ENST00000477237 MRPL36Q9P0J6 103 aaKnown RBP1.41□□□□□ -2.18
XRN1-211ENST00000477237 KLK9Q9UKQ9 250 aa1.41□□□□□ -2.18
XRN1-211ENST00000477237 TMEM14AQ9Y6G1 99 aa1.41□□□□□ -2.18
XRN1-211ENST00000477237 DIDO1Q9BTC0 2240 aaKnown RBP1.4□□□□□ -2.18
XRN1-211ENST00000477237 KMT2BQ9UMN6 2715 aaPredicted RBP1.4□□□□□ -2.18
XRN1-211ENST00000477237 IGKV3OR2-268A0A0C4DH90 116 aa1.4□□□□□ -2.19
XRN1-211ENST00000477237 LINC00959A0A1B0GUT2 108 aa1.4□□□□□ -2.19
XRN1-211ENST00000477237 CPSF4LA6NMK7 179 aaKnown RBP1.4□□□□□ -2.19
XRN1-211ENST00000477237 IAPPP10997 89 aa1.4□□□□□ -2.19
XRN1-211ENST00000477237 ARHGAP5-AS1Q96IT6 56 aa1.4□□□□□ -2.19
XRN1-211ENST00000477237 RNF5Q99942 180 aa1.4□□□□□ -2.19
XRN1-211ENST00000477237 CNFNQ9BYD5 112 aa1.4□□□□□ -2.19
XRN1-211ENST00000477237 TTTY10Q9BZA0 68 aa1.4□□□□□ -2.19
XRN1-211ENST00000477237 BPTFQ12830 3046 aa1.4□□□□□ -2.19
XRN1-211ENST00000477237 ALMS1Q8TCU4 4167 aa1.4□□□□□ -2.19
XRN1-211ENST00000477237 IGKV2-28A0A075B6P5 120 aa1.39□□□□□ -2.19
XRN1-211ENST00000477237 IGKV2D-24A0A075B6R9 120 aa1.39□□□□□ -2.19
XRN1-211ENST00000477237 A0A087WTM6 91 aa1.39□□□□□ -2.19
XRN1-211ENST00000477237 NDUFA4O00483 81 aa1.39□□□□□ -2.19
XRN1-211ENST00000477237 UQCR11O14957 56 aa1.39□□□□□ -2.19
XRN1-211ENST00000477237 IGKV2D-28P01615 120 aa1.39□□□□□ -2.19
XRN1-211ENST00000477237 IGLV7-43P04211 117 aa1.39□□□□□ -2.19
XRN1-211ENST00000477237 PDE6HQ13956 83 aa1.39□□□□□ -2.19
XRN1-211ENST00000477237 C10orf113Q5VZT2 155 aa1.39□□□□□ -2.19
XRN1-211ENST00000477237 WFDC10AQ9H1F0 79 aa1.39□□□□□ -2.19
XRN1-211ENST00000477237 KCNQ1DNQ9H478 68 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms