RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 CKS1BP61024 79 aa19.13■□□□□ 0.65
VEGFA-211ENST00000476772 SRSF9Q13242 221 aaKnown RBP eCLIP19.13■□□□□ 0.65
VEGFA-211ENST00000476772 TAL2Q16559 108 aa19.13■□□□□ 0.65
VEGFA-211ENST00000476772 MEIG1Q5JSS6 88 aa19.12■□□□□ 0.65
VEGFA-211ENST00000476772 SFTA2Q6UW10 78 aa19.12■□□□□ 0.65
VEGFA-211ENST00000476772 C6orf223Q8N319 242 aa19.12■□□□□ 0.65
VEGFA-211ENST00000476772 C3orf84H3BNL1 204 aa19.11■□□□□ 0.65
VEGFA-211ENST00000476772 GCSHP23434 173 aa19.11■□□□□ 0.65
VEGFA-211ENST00000476772 CXCL5P42830 114 aa19.11■□□□□ 0.65
VEGFA-211ENST00000476772 HIGD2BQ4VC39 106 aa19.11■□□□□ 0.65
VEGFA-211ENST00000476772 TIMM17BO60830 172 aa19.11■□□□□ 0.65
VEGFA-211ENST00000476772 ADAMTSL4-AS1Q5T5F5 129 aa19.11■□□□□ 0.65
VEGFA-211ENST00000476772 CEND1Q8N111 149 aa19.11■□□□□ 0.65
VEGFA-211ENST00000476772 COX11Q9Y6N1 276 aa19.09■□□□□ 0.65
VEGFA-211ENST00000476772 A0A0U1RRA0 63 aa19.08■□□□□ 0.65
VEGFA-211ENST00000476772 CIRBPQ14011 172 aaKnown RBP19.08■□□□□ 0.64
VEGFA-211ENST00000476772 TM2D2Q9BX73 214 aa19.08■□□□□ 0.64
VEGFA-211ENST00000476772 SMIM13P0DJ93 91 aa19.07■□□□□ 0.64
VEGFA-211ENST00000476772 ZNF561-AS1K7EIQ3 104 aa19.06■□□□□ 0.64
VEGFA-211ENST00000476772 FXYD2P54710 66 aa19.06■□□□□ 0.64
VEGFA-211ENST00000476772 DAND5Q8N907 189 aa19.06■□□□□ 0.64
VEGFA-211ENST00000476772 NTN5Q8WTR8 489 aaPredicted RBP19.06■□□□□ 0.64
VEGFA-211ENST00000476772 SPANXDQ9BXN6 97 aa19.06■□□□□ 0.64
VEGFA-211ENST00000476772 SPANXCQ9NY87 97 aa19.06■□□□□ 0.64
VEGFA-211ENST00000476772 M0R2N4 97 aa19.05■□□□□ 0.64
VEGFA-211ENST00000476772 UNQ6190/PRO20217Q6UXQ8 127 aa19.05■□□□□ 0.64
VEGFA-211ENST00000476772 GVQW2A0A096LPI5 108 aaPredicted RBP19.04■□□□□ 0.64
VEGFA-211ENST00000476772 C10orf25Q5T742 122 aa19.04■□□□□ 0.64
VEGFA-211ENST00000476772 USP17L23D6RBM5 183 aa19.03■□□□□ 0.64
VEGFA-211ENST00000476772 LY6G6CO95867 125 aa19.03■□□□□ 0.64
VEGFA-211ENST00000476772 ERG28Q9UKR5 140 aa19.03■□□□□ 0.64
VEGFA-211ENST00000476772 DNAH10Q8IVF4 4471 aa19.01■□□□□ 0.63
VEGFA-211ENST00000476772 PFN2P35080 140 aa19.01■□□□□ 0.63
VEGFA-211ENST00000476772 NPC2P61916 151 aa19.01■□□□□ 0.63
VEGFA-211ENST00000476772 MUSTN1Q8IVN3 82 aa19.01■□□□□ 0.63
VEGFA-211ENST00000476772 LINC00476Q8WZB0 136 aa19.01■□□□□ 0.63
VEGFA-211ENST00000476772 PTTG1IPP53801 180 aa19■□□□□ 0.63
VEGFA-211ENST00000476772 Q6ZVH6 145 aa19■□□□□ 0.63
VEGFA-211ENST00000476772 LECT2O14960 151 aa18.99■□□□□ 0.63
VEGFA-211ENST00000476772 PSCAO43653 123 aa18.99■□□□□ 0.63
VEGFA-211ENST00000476772 LINC00158P58513 81 aa18.99■□□□□ 0.63
VEGFA-211ENST00000476772 CAMK2N2Q96S95 79 aa18.99■□□□□ 0.63
VEGFA-211ENST00000476772 C9orf116Q5BN46 136 aaPredicted RBP18.98■□□□□ 0.63
VEGFA-211ENST00000476772 C2orf48Q96LS8 159 aa18.98■□□□□ 0.63
VEGFA-211ENST00000476772 ALMS1Q8TCU4 4167 aa18.98■□□□□ 0.63
VEGFA-211ENST00000476772 MIR7-3HGQ8N6C7 128 aa18.97■□□□□ 0.63
VEGFA-211ENST00000476772 Q6ZR54 194 aa18.96■□□□□ 0.63
VEGFA-211ENST00000476772 EIF4EBP3O60516 100 aaPredicted RBP18.95■□□□□ 0.62
VEGFA-211ENST00000476772 C6orf48Q9UBA6 75 aa18.95■□□□□ 0.62
VEGFA-211ENST00000476772 WFDC2Q14508 124 aa18.95■□□□□ 0.62
VEGFA-211ENST00000476772 Q6ZRU5 148 aa18.95■□□□□ 0.62
VEGFA-211ENST00000476772 IFITM1P13164 125 aa18.94■□□□□ 0.62
VEGFA-211ENST00000476772 Q6ZRN7 208 aaPredicted RBP18.94■□□□□ 0.62
VEGFA-211ENST00000476772 LINC00308Q8TCZ7 52 aa18.94■□□□□ 0.62
VEGFA-211ENST00000476772 KMT2AQ03164 3969 aa18.93■□□□□ 0.62
VEGFA-211ENST00000476772 COL5A1-AS1Q5SY13 56 aa18.93■□□□□ 0.62
VEGFA-211ENST00000476772 NHP2Q9NX24 153 aaKnown RBP18.93■□□□□ 0.62
VEGFA-211ENST00000476772 A6NDN8 102 aa18.92■□□□□ 0.62
VEGFA-211ENST00000476772 SOSTDC1Q6X4U4 206 aa18.92■□□□□ 0.62
VEGFA-211ENST00000476772 TMEM238LA0A1B0GVL6 79 aa18.92■□□□□ 0.62
VEGFA-211ENST00000476772 A6NJY4 79 aa18.92■□□□□ 0.62
VEGFA-211ENST00000476772 F8WDY8 70 aa18.92■□□□□ 0.62
VEGFA-211ENST00000476772 RPL24P83731 157 aaKnown RBP18.92■□□□□ 0.62
VEGFA-211ENST00000476772 COX17Q14061 63 aa18.92■□□□□ 0.62
VEGFA-211ENST00000476772 TRBV30A0A0K0K1B3 111 aa18.91■□□□□ 0.62
VEGFA-211ENST00000476772 A4D1N5 150 aa18.91■□□□□ 0.62
VEGFA-211ENST00000476772 LBHQ53QV2 105 aaPredicted RBP18.9■□□□□ 0.62
VEGFA-211ENST00000476772 DNAH6Q9C0G6 4158 aa18.9■□□□□ 0.62
VEGFA-211ENST00000476772 SYCNQ0VAF6 134 aa18.89■□□□□ 0.61
VEGFA-211ENST00000476772 K7ERJ3 54 aa18.88■□□□□ 0.61
VEGFA-211ENST00000476772 SLPIP03973 132 aa18.88■□□□□ 0.61
VEGFA-211ENST00000476772 COPS9Q8WXC6 57 aa18.85■□□□□ 0.61
VEGFA-211ENST00000476772 CARD19Q96LW7 228 aa18.85■□□□□ 0.61
VEGFA-211ENST00000476772 A0A1B0GWB2 263 aa18.84■□□□□ 0.61
VEGFA-211ENST00000476772 LRCOL1A6NCL2 159 aa18.83■□□□□ 0.61
VEGFA-211ENST00000476772 CFC1BP0CG36 223 aa18.82■□□□□ 0.6
VEGFA-211ENST00000476772 CFC1P0CG37 223 aa18.82■□□□□ 0.6
VEGFA-211ENST00000476772 PPDPFQ9H3Y8 114 aa18.82■□□□□ 0.6
VEGFA-211ENST00000476772 TAX1BP3O14907 124 aa18.81■□□□□ 0.6
VEGFA-211ENST00000476772 RAB37Q96AX2 223 aa18.81■□□□□ 0.6
VEGFA-211ENST00000476772 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.8■□□□□ 0.6
VEGFA-211ENST00000476772 SND1-IT1Q9HBX3 110 aa18.8■□□□□ 0.6
VEGFA-211ENST00000476772 C14orf177Q52M58 125 aa18.79■□□□□ 0.6
VEGFA-211ENST00000476772 DNAH2Q9P225 4427 aa18.79■□□□□ 0.6
VEGFA-211ENST00000476772 C1orf134Q5TEV5 83 aa18.78■□□□□ 0.6
VEGFA-211ENST00000476772 RNF151Q2KHN1 245 aa18.77■□□□□ 0.6
VEGFA-211ENST00000476772 A0A0B4J2C4 111 aa18.76■□□□□ 0.59
VEGFA-211ENST00000476772 LOC107984156A0A0G2JMH3 177 aa18.76■□□□□ 0.59
VEGFA-211ENST00000476772 NDUFC2-KCTD14E9PQ53 114 aa18.76■□□□□ 0.59
VEGFA-211ENST00000476772 ARL17AQ8IVW1 177 aa18.76■□□□□ 0.59
VEGFA-211ENST00000476772 IGLV2-33A0A075B6J2 118 aaPredicted RBP18.73■□□□□ 0.59
VEGFA-211ENST00000476772 CNBPP62633 177 aaKnown RBP18.73■□□□□ 0.59
VEGFA-211ENST00000476772 Q6ZRP5 223 aa18.72■□□□□ 0.59
VEGFA-211ENST00000476772 XAGE1AQ9HD64 81 aa18.71■□□□□ 0.59
VEGFA-211ENST00000476772 PRO1854Q9UHT4 67 aa18.71■□□□□ 0.59
VEGFA-211ENST00000476772 A0A087WTM6 91 aa18.69■□□□□ 0.58
VEGFA-211ENST00000476772 TLX1NBP0CAT3 122 aa18.69■□□□□ 0.58
VEGFA-211ENST00000476772 GAGE2EQ4V326 116 aa18.69■□□□□ 0.58
VEGFA-211ENST00000476772 GAGE2DQ9UEU5 116 aa18.69■□□□□ 0.58
VEGFA-211ENST00000476772 NAA38Q9BRA0 125 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms