RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 CYP4F30PQ9H0H9 118 aa3.72□□□□□ -1.81
RTF1-203ENST00000473214 IGLV4-69A0A075B6H9 119 aa3.71□□□□□ -1.82
RTF1-203ENST00000473214 SIX6O95475 246 aa3.71□□□□□ -1.82
RTF1-203ENST00000473214 ASAH2BP0C7U1 165 aa3.71□□□□□ -1.82
RTF1-203ENST00000473214 MIFP14174 115 aa3.71□□□□□ -1.82
RTF1-203ENST00000473214 CYP2G1PQ6ZSU1 146 aa3.71□□□□□ -1.82
RTF1-203ENST00000473214 MANBALQ9NQG1 85 aa3.71□□□□□ -1.82
RTF1-203ENST00000473214 PRO0461Q9UI25 63 aa3.71□□□□□ -1.82
RTF1-203ENST00000473214 PRKDCP78527 4128 aaKnown RBP3.71□□□□□ -1.82
RTF1-203ENST00000473214 SNRNP200O75643 2136 aaKnown RBP3.71□□□□□ -1.82
RTF1-203ENST00000473214 KMT2CQ8NEZ4 4911 aaKnown RBP3.7□□□□□ -1.82
RTF1-203ENST00000473214 CR1P17927 2039 aa3.7□□□□□ -1.82
RTF1-203ENST00000473214 IGKV3D-11A0A0A0MRZ8 115 aa3.7□□□□□ -1.82
RTF1-203ENST00000473214 C7orf77A4D0Y5 90 aa3.7□□□□□ -1.82
RTF1-203ENST00000473214 IGKV3-11P04433 115 aa3.7□□□□□ -1.82
RTF1-203ENST00000473214 CYSTM1Q9H1C7 97 aa3.7□□□□□ -1.82
RTF1-203ENST00000473214 HIGD1BQ9P298 99 aa3.7□□□□□ -1.82
RTF1-203ENST00000473214 NUP214P35658 2090 aaPredicted RBP3.7□□□□□ -1.82
RTF1-203ENST00000473214 TENM1Q9UKZ4 2725 aa3.7□□□□□ -1.82
RTF1-203ENST00000473214 MGAM2Q2M2H8 2515 aa3.7□□□□□ -1.82
RTF1-203ENST00000473214 KIAA1549Q9HCM3 1950 aa3.69□□□□□ -1.82
RTF1-203ENST00000473214 TFF1P04155 84 aa3.69□□□□□ -1.82
RTF1-203ENST00000473214 MT3P25713 68 aa3.69□□□□□ -1.82
RTF1-203ENST00000473214 SPINT3P49223 89 aa3.69□□□□□ -1.82
RTF1-203ENST00000473214 SMIM11AP58511 58 aa3.69□□□□□ -1.82
RTF1-203ENST00000473214 C2orf82Q6UX34 121 aa3.69□□□□□ -1.82
RTF1-203ENST00000473214 CLECL1Q8IZS7 167 aa3.69□□□□□ -1.82
RTF1-203ENST00000473214 Q8TAT8 98 aa3.69□□□□□ -1.82
RTF1-203ENST00000473214 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.69□□□□□ -1.822e-7■■■■■ 27.8
RTF1-203ENST00000473214 A0A0G2JND7 137 aa3.68□□□□□ -1.82
RTF1-203ENST00000473214 SPINK14Q6IE38 97 aa3.68□□□□□ -1.82
RTF1-203ENST00000473214 CDC42SE1Q9NRR8 79 aa3.68□□□□□ -1.82
RTF1-203ENST00000473214 USF3Q68DE3 2245 aa3.68□□□□□ -1.82
RTF1-203ENST00000473214 MPDZO75970 2070 aa3.67□□□□□ -1.82
RTF1-203ENST00000473214 IGLV2-18A0A075B6J9 118 aa3.67□□□□□ -1.82
RTF1-203ENST00000473214 IGHV3OR16-8A0A075B7F1 116 aa3.67□□□□□ -1.82
RTF1-203ENST00000473214 A0A087WWC5 75 aa3.67□□□□□ -1.82
RTF1-203ENST00000473214 TRBV7-1A0A0A6YYK4 115 aa3.67□□□□□ -1.82
RTF1-203ENST00000473214 ODF3BA8MYP8 253 aa3.67□□□□□ -1.82
RTF1-203ENST00000473214 SMIM13P0DJ93 91 aa3.67□□□□□ -1.82
RTF1-203ENST00000473214 ERHP84090 104 aaKnown RBP3.67□□□□□ -1.82
RTF1-203ENST00000473214 LYPD5Q6UWN5 251 aa3.67□□□□□ -1.82
RTF1-203ENST00000473214 ODF3Q96PU9 254 aa3.67□□□□□ -1.82
RTF1-203ENST00000473214 KLK12Q9UKR0 248 aa3.67□□□□□ -1.82
RTF1-203ENST00000473214 S4R3C0 116 aa3.67□□□□□ -1.82
RTF1-203ENST00000473214 NOTCH1P46531 2555 aa3.67□□□□□ -1.82
RTF1-203ENST00000473214 TRRAPQ9Y4A5 3859 aa3.66□□□□□ -1.82
RTF1-203ENST00000473214 DNAJC13O75165 2243 aa3.66□□□□□ -1.82
RTF1-203ENST00000473214 UMAD1C9J7I0 102 aa3.66□□□□□ -1.82
RTF1-203ENST00000473214 F2Z2F3 143 aa3.66□□□□□ -1.82
RTF1-203ENST00000473214 STATHP02808 62 aa3.66□□□□□ -1.82
RTF1-203ENST00000473214 ACYP1P07311 99 aa3.66□□□□□ -1.82
RTF1-203ENST00000473214 P0C880 135 aa3.66□□□□□ -1.82
RTF1-203ENST00000473214 ZNF791Q3KP31 576 aaPredicted RBP3.66□□□□□ -1.82
RTF1-203ENST00000473214 C14orf177Q52M58 125 aa3.66□□□□□ -1.82
RTF1-203ENST00000473214 KPRPQ5T749 579 aaPredicted RBP3.66□□□□□ -1.82
RTF1-203ENST00000473214 TIMM21Q9BVV7 248 aa3.66□□□□□ -1.82
RTF1-203ENST00000473214 HIGD2AQ9BW72 106 aa3.66□□□□□ -1.82
RTF1-203ENST00000473214 ABCA1O95477 2261 aa3.66□□□□□ -1.82
RTF1-203ENST00000473214 SCN3AQ9NY46 2000 aa3.66□□□□□ -1.82
RTF1-203ENST00000473214 TMSB15BA0A087X1C1 80 aa3.65□□□□□ -1.83
RTF1-203ENST00000473214 TRAV12-1A0A0B4J245 112 aa3.65□□□□□ -1.83
RTF1-203ENST00000473214 CFAP126Q5VTH2 177 aa3.65□□□□□ -1.83
RTF1-203ENST00000473214 LINC00612Q8N6U2 182 aa3.65□□□□□ -1.83
RTF1-203ENST00000473214 PRO1854Q9UHT4 67 aa3.65□□□□□ -1.83
RTF1-203ENST00000473214 AGRNO00468 2067 aa3.64□□□□□ -1.83
RTF1-203ENST00000473214 IGLV3-16A0A075B6K0 115 aa3.64□□□□□ -1.83
RTF1-203ENST00000473214 A0A087WYN8 130 aa3.64□□□□□ -1.83
RTF1-203ENST00000473214 H7BZZ5 65 aa3.64□□□□□ -1.83
RTF1-203ENST00000473214 ZNF79Q15937 498 aa3.64□□□□□ -1.83
RTF1-203ENST00000473214 MALRD1Q5VYJ5 2156 aa3.63□□□□□ -1.83
RTF1-203ENST00000473214 NACAE9PAV3 2078 aa3.63□□□□□ -1.83
RTF1-203ENST00000473214 TMEM30CPA0ZSE6 113 aa3.63□□□□□ -1.83
RTF1-203ENST00000473214 PSCAO43653 123 aa3.63□□□□□ -1.83
RTF1-203ENST00000473214 BCE1O60756 84 aa3.63□□□□□ -1.83
RTF1-203ENST00000473214 EFNA4P52798 201 aa3.63□□□□□ -1.83
RTF1-203ENST00000473214 C10orf128Q5T292 105 aa3.63□□□□□ -1.83
RTF1-203ENST00000473214 LINC00643Q86TS7 51 aa3.63□□□□□ -1.83
RTF1-203ENST00000473214 IFI27L1Q96BM0 104 aa3.63□□□□□ -1.83
RTF1-203ENST00000473214 LHFPL6Q9Y693 200 aa3.63□□□□□ -1.83
RTF1-203ENST00000473214 BIRC6Q9NR09 4857 aa3.62□□□□□ -1.83
RTF1-203ENST00000473214 ARHGAP21Q5T5U3 1957 aa3.62□□□□□ -1.83
RTF1-203ENST00000473214 EPPK1P58107 5090 aaKnown RBP3.62□□□□□ -1.83
RTF1-203ENST00000473214 TRAV12-3A0A0B4J271 114 aa3.62□□□□□ -1.83
RTF1-203ENST00000473214 DEFB108AA8MXU0 73 aa3.62□□□□□ -1.83
RTF1-203ENST00000473214 SFTA3P0C7M3 94 aa3.62□□□□□ -1.83
RTF1-203ENST00000473214 KRTAP10-5P60370 271 aa3.62□□□□□ -1.83
RTF1-203ENST00000473214 MOBPQ13875 183 aa3.62□□□□□ -1.83
RTF1-203ENST00000473214 ZNF56Q15929 161 aa3.62□□□□□ -1.83
RTF1-203ENST00000473214 LINC00483Q53H64 154 aa3.62□□□□□ -1.83
RTF1-203ENST00000473214 TMEM170BQ5T4T1 132 aa3.62□□□□□ -1.83
RTF1-203ENST00000473214 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.62□□□□□ -1.83
RTF1-203ENST00000473214 ZNF833PQ6ZTB9 187 aa3.62□□□□□ -1.83
RTF1-203ENST00000473214 Q8N6K4 173 aa3.62□□□□□ -1.83
RTF1-203ENST00000473214 FAM167A-AS1Q96KT0 104 aa3.62□□□□□ -1.83
RTF1-203ENST00000473214 LINC01600Q96MT4 127 aa3.62□□□□□ -1.83
RTF1-203ENST00000473214 CCL19Q99731 98 aa3.62□□□□□ -1.83
RTF1-203ENST00000473214 SCRT1Q9BWW7 348 aa3.62□□□□□ -1.83
RTF1-203ENST00000473214 TRBV7-3A0A075B6L6 115 aa3.61□□□□□ -1.83
RTF1-203ENST00000473214 IGKV3D-15A0A087WSY6 115 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 464.3 ms