RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 A0A0J9YXV3 536 aa5.91□□□□□ -1.46
SMC4-213ENST00000472282 COX6A2Q02221 97 aa5.91□□□□□ -1.46
SMC4-213ENST00000472282 PMVKQ15126 192 aa5.91□□□□□ -1.46
SMC4-213ENST00000472282 FAM19A3Q7Z5A8 133 aa5.91□□□□□ -1.46
SMC4-213ENST00000472282 HERC1Q15751 4861 aa5.91□□□□□ -1.46
SMC4-213ENST00000472282 ZNF561-AS1K7EIQ3 104 aa5.9□□□□□ -1.46
SMC4-213ENST00000472282 NUPR1O60356 82 aa5.9□□□□□ -1.46
SMC4-213ENST00000472282 ATP5LO75964 103 aa5.9□□□□□ -1.46
SMC4-213ENST00000472282 NDUFA6P56556 154 aa5.9□□□□□ -1.46
SMC4-213ENST00000472282 LINC00526Q96FQ7 95 aa5.9□□□□□ -1.46
SMC4-213ENST00000472282 CST9LQ9H4G1 147 aa5.9□□□□□ -1.46
SMC4-213ENST00000472282 A0A087WZ39 114 aa5.89□□□□□ -1.47
SMC4-213ENST00000472282 APOMO95445 188 aa5.89□□□□□ -1.47
SMC4-213ENST00000472282 CNBPP62633 177 aaKnown RBP5.89□□□□□ -1.47
SMC4-213ENST00000472282 HERVK_113P63121 156 aa5.89□□□□□ -1.47
SMC4-213ENST00000472282 SEC11AP67812 179 aa5.89□□□□□ -1.47
SMC4-213ENST00000472282 ORAOV1Q8WV07 137 aa5.89□□□□□ -1.47
SMC4-213ENST00000472282 GEMIN7Q9H840 131 aaKnown RBP5.89□□□□□ -1.47
SMC4-213ENST00000472282 IGHV3-64A0A075B6Q5 118 aa5.88□□□□□ -1.47
SMC4-213ENST00000472282 SPAG11BQ08648 103 aa5.88□□□□□ -1.47
SMC4-213ENST00000472282 SCXQ7RTU7 201 aa5.88□□□□□ -1.47
SMC4-213ENST00000472282 LINC00469Q8N7U9 141 aa5.88□□□□□ -1.47
SMC4-213ENST00000472282 IFI27L1Q96BM0 104 aa5.88□□□□□ -1.47
SMC4-213ENST00000472282 CDKN2A-AS1Q9UH64 79 aa5.88□□□□□ -1.47
SMC4-213ENST00000472282 IGLV4-69A0A075B6H9 119 aa5.87□□□□□ -1.47
SMC4-213ENST00000472282 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.87□□□□□ -1.47
SMC4-213ENST00000472282 TINCRA0A1B0GVN0 87 aa5.87□□□□□ -1.47
SMC4-213ENST00000472282 LEPROTL1O95214 131 aa5.87□□□□□ -1.47
SMC4-213ENST00000472282 FABP4P15090 132 aa5.87□□□□□ -1.47
SMC4-213ENST00000472282 C9orf163Q8N9P6 203 aa5.87□□□□□ -1.47
SMC4-213ENST00000472282 OR10D4PQ8NGN7 298 aa5.87□□□□□ -1.47
SMC4-213ENST00000472282 CARD19Q96LW7 228 aa5.87□□□□□ -1.47
SMC4-213ENST00000472282 CHAC1Q9BUX1 264 aa5.87□□□□□ -1.47
SMC4-213ENST00000472282 IGLV5-45A0A087WSX0 123 aa5.86□□□□□ -1.47
SMC4-213ENST00000472282 H0Y8G0 127 aa5.86□□□□□ -1.47
SMC4-213ENST00000472282 IGLC3P0DOY3 106 aa5.86□□□□□ -1.47
SMC4-213ENST00000472282 KRTAP10-4P60372 401 aaPredicted RBP5.86□□□□□ -1.47
SMC4-213ENST00000472282 LINC01561Q8N1V8 128 aa5.86□□□□□ -1.47
SMC4-213ENST00000472282 PACRGQ96M98 296 aaPredicted RBP5.86□□□□□ -1.47
SMC4-213ENST00000472282 CHTOPQ9Y3Y2 248 aaKnown RBP5.86□□□□□ -1.47
SMC4-213ENST00000472282 TRAV12-1A0A0B4J245 112 aa5.85□□□□□ -1.47
SMC4-213ENST00000472282 C11orf86A6NJI1 115 aa5.85□□□□□ -1.47
SMC4-213ENST00000472282 SMIM1B2RUZ4 78 aa5.85□□□□□ -1.47
SMC4-213ENST00000472282 ZNF22P17026 224 aaPredicted RBP5.85□□□□□ -1.47
SMC4-213ENST00000472282 SYCNQ0VAF6 134 aa5.85□□□□□ -1.47
SMC4-213ENST00000472282 COA6Q5JTJ3 125 aaKnown RBP5.85□□□□□ -1.47
SMC4-213ENST00000472282 Q6ZRU5 148 aa5.85□□□□□ -1.47
SMC4-213ENST00000472282 CIRBP-AS1Q8TBR5 109 aa5.85□□□□□ -1.47
SMC4-213ENST00000472282 C2orf48Q96LS8 159 aa5.85□□□□□ -1.47
SMC4-213ENST00000472282 CAMK2N2Q96S95 79 aa5.85□□□□□ -1.47
SMC4-213ENST00000472282 TOMM7Q9P0U1 55 aa5.85□□□□□ -1.47
SMC4-213ENST00000472282 HSPB8Q9UJY1 196 aa5.85□□□□□ -1.47
SMC4-213ENST00000472282 F8VRH5 84 aa5.84□□□□□ -1.47
SMC4-213ENST00000472282 SPINK8P0C7L1 97 aa5.84□□□□□ -1.47
SMC4-213ENST00000472282 KIAA0087Q14695 138 aa5.84□□□□□ -1.47
SMC4-213ENST00000472282 H3BRM9 83 aa5.83□□□□□ -1.48
SMC4-213ENST00000472282 NDUFA1O15239 70 aa5.83□□□□□ -1.48
SMC4-213ENST00000472282 PRSS2P07478 247 aa5.83□□□□□ -1.48
SMC4-213ENST00000472282 ODF1Q14990 250 aa5.83□□□□□ -1.48
SMC4-213ENST00000472282 TMEM170BQ5T4T1 132 aa5.83□□□□□ -1.48
SMC4-213ENST00000472282 SDIM1Q6ZPB5 146 aa5.83□□□□□ -1.48
SMC4-213ENST00000472282 Q8IZM0 81 aa5.83□□□□□ -1.48
SMC4-213ENST00000472282 MRPL35Q9NZE8 188 aaKnown RBP5.83□□□□□ -1.48
SMC4-213ENST00000472282 SRRM2Q9UQ35 2752 aaKnown RBP5.82□□□□□ -1.48
SMC4-213ENST00000472282 DMBT1Q9UGM3 2413 aaPredicted RBP5.82□□□□□ -1.48
SMC4-213ENST00000472282 PANO1I0J062 215 aa5.82□□□□□ -1.48
SMC4-213ENST00000472282 CHTF8P0CG12 524 aa5.82□□□□□ -1.48
SMC4-213ENST00000472282 C10orf25Q5T742 122 aa5.82□□□□□ -1.48
SMC4-213ENST00000472282 C2orf82Q6UX34 121 aa5.82□□□□□ -1.48
SMC4-213ENST00000472282 UNQ6190/PRO20217Q6UXQ8 127 aa5.82□□□□□ -1.48
SMC4-213ENST00000472282 MAP1LC3CQ9BXW4 147 aa5.82□□□□□ -1.48
SMC4-213ENST00000472282 LRP1Q07954 4544 aaKnown RBP5.81□□□□□ -1.48
SMC4-213ENST00000472282 A0A096LNI7 61 aa5.81□□□□□ -1.48
SMC4-213ENST00000472282 F8WDY8 70 aa5.81□□□□□ -1.48
SMC4-213ENST00000472282 C6orf226Q5I0X4 101 aa5.81□□□□□ -1.48
SMC4-213ENST00000472282 COX7B2Q8TF08 81 aa5.81□□□□□ -1.48
SMC4-213ENST00000472282 C6orf48Q9UBA6 75 aa5.81□□□□□ -1.48
SMC4-213ENST00000472282 PKHD1L1Q86WI1 4243 aa5.81□□□□□ -1.48
SMC4-213ENST00000472282 FAT3Q8TDW7 4589 aa5.81□□□□□ -1.48
SMC4-213ENST00000472282 IGKV2-24A0A0C4DH68 120 aa5.8□□□□□ -1.48
SMC4-213ENST00000472282 IGLV5-39A0A0G2JS06 123 aa5.8□□□□□ -1.48
SMC4-213ENST00000472282 LOC107984640A0A0U1RRK4 108 aa5.8□□□□□ -1.48
SMC4-213ENST00000472282 KRTAP29-1A8MX34 341 aaPredicted RBP5.8□□□□□ -1.48
SMC4-213ENST00000472282 HNRNPA3P51991 378 aaKnown RBP5.8□□□□□ -1.48
SMC4-213ENST00000472282 CKS1BP61024 79 aa5.8□□□□□ -1.48
SMC4-213ENST00000472282 RPL18AQ02543 176 aaKnown RBP5.8□□□□□ -1.48
SMC4-213ENST00000472282 PMCHL2Q9BQD1 86 aa5.8□□□□□ -1.48
SMC4-213ENST00000472282 PKIGQ9Y2B9 76 aa5.8□□□□□ -1.48
SMC4-213ENST00000472282 TRBV30A0A0K0K1B3 111 aa5.79□□□□□ -1.48
SMC4-213ENST00000472282 TMEM223A0PJW6 202 aa5.79□□□□□ -1.48
SMC4-213ENST00000472282 SYS1-DBNDD2H3BUS1 97 aa5.79□□□□□ -1.48
SMC4-213ENST00000472282 S100A6P06703 90 aa5.79□□□□□ -1.48
SMC4-213ENST00000472282 CXCL5P42830 114 aa5.79□□□□□ -1.48
SMC4-213ENST00000472282 CIRBPQ14011 172 aaKnown RBP5.79□□□□□ -1.48
SMC4-213ENST00000472282 SPACA4Q8TDM5 124 aa5.79□□□□□ -1.48
SMC4-213ENST00000472282 DPM2O94777 84 aa5.78□□□□□ -1.48
SMC4-213ENST00000472282 IGKCP01834 107 aa5.78□□□□□ -1.48
SMC4-213ENST00000472282 C3orf79P0CE67 100 aa5.78□□□□□ -1.48
SMC4-213ENST00000472282 PLNP26678 52 aa5.78□□□□□ -1.48
SMC4-213ENST00000472282 GAGE2BQ13066 116 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms