RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 LINC00308Q8TCZ7 52 aa12.45□□□□□ -0.42
GCFC2-208ENST00000472230 ENHOQ6UWT2 76 aa12.44□□□□□ -0.42
GCFC2-208ENST00000472230 TENM3Q9P273 2699 aa12.44□□□□□ -0.42
GCFC2-208ENST00000472230 FOXI1Q12951 378 aa12.44□□□□□ -0.42
GCFC2-208ENST00000472230 CFAP161Q6P656 301 aa12.44□□□□□ -0.42
GCFC2-208ENST00000472230 TRAV8-4A0A0B4J246 113 aa12.42□□□□□ -0.42
GCFC2-208ENST00000472230 LINC00158P58513 81 aa12.42□□□□□ -0.42
GCFC2-208ENST00000472230 CKS1BP61024 79 aa12.42□□□□□ -0.42
GCFC2-208ENST00000472230 ERG28Q9UKR5 140 aa12.42□□□□□ -0.42
GCFC2-208ENST00000472230 LOC107984156A0A0G2JMH3 177 aa12.42□□□□□ -0.42
GCFC2-208ENST00000472230 LYRM7Q5U5X0 104 aa12.42□□□□□ -0.42
GCFC2-208ENST00000472230 ARL17AQ8IVW1 177 aa12.42□□□□□ -0.42
GCFC2-208ENST00000472230 IBA57-AS1B1ANH7 110 aa12.41□□□□□ -0.42
GCFC2-208ENST00000472230 H7C2G1 150 aa12.41□□□□□ -0.42
GCFC2-208ENST00000472230 EIF4EBP3O60516 100 aaPredicted RBP12.41□□□□□ -0.42
GCFC2-208ENST00000472230 Q1RN00 199 aa12.41□□□□□ -0.42
GCFC2-208ENST00000472230 B9D2Q9BPU9 175 aa12.4□□□□□ -0.42
GCFC2-208ENST00000472230 CXCL5P42830 114 aa12.4□□□□□ -0.42
GCFC2-208ENST00000472230 MIR7-3HGQ8N6C7 128 aa12.39□□□□□ -0.43
GCFC2-208ENST00000472230 NBEAL1Q6ZS30 2694 aa12.39□□□□□ -0.43
GCFC2-208ENST00000472230 PFN2P35080 140 aa12.39□□□□□ -0.43
GCFC2-208ENST00000472230 PSMB2P49721 201 aa12.39□□□□□ -0.43
GCFC2-208ENST00000472230 LINC01556Q5JQF7 62 aa12.39□□□□□ -0.43
GCFC2-208ENST00000472230 C2orf82Q6UX34 121 aa12.37□□□□□ -0.43
GCFC2-208ENST00000472230 SOSTDC1Q6X4U4 206 aa12.37□□□□□ -0.43
GCFC2-208ENST00000472230 KLK5Q9Y337 293 aaPredicted RBP12.37□□□□□ -0.43
GCFC2-208ENST00000472230 MGAM2Q2M2H8 2515 aa12.37□□□□□ -0.43
GCFC2-208ENST00000472230 SCGB1C2P0DMR2 95 aa12.37□□□□□ -0.43
GCFC2-208ENST00000472230 KIAA0087Q14695 138 aa12.37□□□□□ -0.43
GCFC2-208ENST00000472230 PPDPFQ9H3Y8 114 aa12.37□□□□□ -0.43
GCFC2-208ENST00000472230 CCL18P55774 89 aa12.36□□□□□ -0.43
GCFC2-208ENST00000472230 SPAG11BQ08648 103 aa12.36□□□□□ -0.43
GCFC2-208ENST00000472230 RPL13AP40429 203 aaKnown RBP12.34□□□□□ -0.43
GCFC2-208ENST00000472230 LINC00588Q9Y4M8 146 aa12.34□□□□□ -0.43
GCFC2-208ENST00000472230 H3BMG7 143 aa12.33□□□□□ -0.44
GCFC2-208ENST00000472230 DNAH10OSP0CZ25 163 aa12.33□□□□□ -0.44
GCFC2-208ENST00000472230 C1orf43Q9BWL3 253 aa12.32□□□□□ -0.44
GCFC2-208ENST00000472230 SND1-IT1Q9HBX3 110 aa12.31□□□□□ -0.44
GCFC2-208ENST00000472230 TRBV20-1A0A075B6N2 111 aa12.31□□□□□ -0.44
GCFC2-208ENST00000472230 COX17Q14061 63 aa12.3□□□□□ -0.44
GCFC2-208ENST00000472230 IGKV2D-24A0A075B6R9 120 aa12.29□□□□□ -0.44
GCFC2-208ENST00000472230 TRBV30A0A0K0K1B3 111 aa12.29□□□□□ -0.44
GCFC2-208ENST00000472230 NHLRC4P0CG21 123 aaPredicted RBP12.29□□□□□ -0.44
GCFC2-208ENST00000472230 C6orf223Q8N319 242 aa12.29□□□□□ -0.44
GCFC2-208ENST00000472230 COX6CP09669 75 aa12.28□□□□□ -0.44
GCFC2-208ENST00000472230 TCL1BO95988 128 aa12.28□□□□□ -0.44
GCFC2-208ENST00000472230 TRIAP1O43715 76 aa12.27□□□□□ -0.44
GCFC2-208ENST00000472230 KRTAP26-1Q6PEX3 210 aa12.27□□□□□ -0.44
GCFC2-208ENST00000472230 LINC00526Q96FQ7 95 aa12.27□□□□□ -0.44
GCFC2-208ENST00000472230 F8W1H4 67 aa12.27□□□□□ -0.45
GCFC2-208ENST00000472230 ZNF561-AS1K7EIQ3 104 aa12.27□□□□□ -0.45
GCFC2-208ENST00000472230 UNQ6190/PRO20217Q6UXQ8 127 aa12.27□□□□□ -0.45
GCFC2-208ENST00000472230 Q9HAA7 133 aa12.27□□□□□ -0.45
GCFC2-208ENST00000472230 HUWE1Q7Z6Z7 4374 aaKnown RBP12.27□□□□□ -0.45
GCFC2-208ENST00000472230 TRAV13-2A0A0B4J235 113 aa12.26□□□□□ -0.45
GCFC2-208ENST00000472230 C9orf116Q5BN46 136 aaPredicted RBP12.25□□□□□ -0.45
GCFC2-208ENST00000472230 NTN5Q8WTR8 489 aaPredicted RBP12.25□□□□□ -0.45
GCFC2-208ENST00000472230 UPK3BQ9BT76 320 aa12.25□□□□□ -0.45
GCFC2-208ENST00000472230 HIGD2BQ4VC39 106 aa12.24□□□□□ -0.45
GCFC2-208ENST00000472230 C10orf25Q5T742 122 aa12.24□□□□□ -0.45
GCFC2-208ENST00000472230 ATXN8Q156A1 80 aa12.23□□□□□ -0.45
GCFC2-208ENST00000472230 MTURNQ8N3F0 131 aa12.22□□□□□ -0.45
GCFC2-208ENST00000472230 MUC7Q8TAX7 377 aa12.22□□□□□ -0.45
GCFC2-208ENST00000472230 CAMK2N2Q96S95 79 aa12.22□□□□□ -0.45
GCFC2-208ENST00000472230 IGKV2-28A0A075B6P5 120 aa12.21□□□□□ -0.45
GCFC2-208ENST00000472230 IGKV2D-28P01615 120 aa12.21□□□□□ -0.45
GCFC2-208ENST00000472230 RMI2Q96E14 147 aa12.21□□□□□ -0.46
GCFC2-208ENST00000472230 GVQW2A0A096LPI5 108 aaPredicted RBP12.2□□□□□ -0.46
GCFC2-208ENST00000472230 WFDC2Q14508 124 aa12.2□□□□□ -0.46
GCFC2-208ENST00000472230 LINC00337Q8N6G1 96 aa12.2□□□□□ -0.46
GCFC2-208ENST00000472230 C15orf56Q8N910 161 aa12.2□□□□□ -0.46
GCFC2-208ENST00000472230 UBE2DNLQ8IWF7 75 aa12.2□□□□□ -0.46
GCFC2-208ENST00000472230 PRO0461Q9UI25 63 aa12.2□□□□□ -0.46
GCFC2-208ENST00000472230 OR13C6PQ8NH95 151 aa12.18□□□□□ -0.46
GCFC2-208ENST00000472230 C6orf48Q9UBA6 75 aa12.18□□□□□ -0.46
GCFC2-208ENST00000472230 APLNQ9ULZ1 77 aa12.18□□□□□ -0.46
GCFC2-208ENST00000472230 C2orf48Q96LS8 159 aa12.18□□□□□ -0.46
GCFC2-208ENST00000472230 NUPR2A6NF83 97 aa12.16□□□□□ -0.46
GCFC2-208ENST00000472230 NDUFC2O95298 119 aa12.16□□□□□ -0.46
GCFC2-208ENST00000472230 OCIAD2Q56VL3 154 aa12.16□□□□□ -0.46
GCFC2-208ENST00000472230 CLEC2BQ92478 149 aa12.16□□□□□ -0.46
GCFC2-208ENST00000472230 C9JAW5 83 aa12.16□□□□□ -0.46
GCFC2-208ENST00000472230 F8WDY8 70 aa12.16□□□□□ -0.46
GCFC2-208ENST00000472230 LINC01620Q4KN68 170 aa12.14□□□□□ -0.47
GCFC2-208ENST00000472230 RPL28P46779 137 aaKnown RBP12.14□□□□□ -0.47
GCFC2-208ENST00000472230 Q6ZRU5 148 aa12.14□□□□□ -0.47
GCFC2-208ENST00000472230 K7ERU9 68 aa12.13□□□□□ -0.47
GCFC2-208ENST00000472230 LST1O00453 97 aa12.13□□□□□ -0.47
GCFC2-208ENST00000472230 ETDBQ3ZM63 59 aa12.13□□□□□ -0.47
GCFC2-208ENST00000472230 SMCPP49901 116 aaPredicted RBP12.12□□□□□ -0.47
GCFC2-208ENST00000472230 SMIM11BQ8TCY0 68 aa12.12□□□□□ -0.47
GCFC2-208ENST00000472230 SLC25A20O43772 301 aa12.12□□□□□ -0.47
GCFC2-208ENST00000472230 DNAH9Q9NYC9 4486 aa12.11□□□□□ -0.47
GCFC2-208ENST00000472230 PRR3P79522 188 aaKnown RBP12.11□□□□□ -0.47
GCFC2-208ENST00000472230 SYCNQ0VAF6 134 aa12.11□□□□□ -0.47
GCFC2-208ENST00000472230 KRTAP21-3Q3LHN1 58 aa12.1□□□□□ -0.47
GCFC2-208ENST00000472230 COL7A1Q02388 2944 aa12.1□□□□□ -0.47
GCFC2-208ENST00000472230 NCR3O14931 201 aa12.09□□□□□ -0.47
GCFC2-208ENST00000472230 USP17L23D6RBM5 183 aa12.09□□□□□ -0.47
GCFC2-208ENST00000472230 TRBV10-2A0A0K0K1G8 114 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms