RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 C6orf226Q5I0X4 101 aa12.75□□□□□ -0.37
CHMP2B-204ENST00000472024 MYMXA0A1B0GTQ4 84 aa12.74□□□□□ -0.37
CHMP2B-204ENST00000472024 TTTY13Q9BZ97 58 aa12.74□□□□□ -0.37
CHMP2B-204ENST00000472024 TOMM7Q9P0U1 55 aa12.74□□□□□ -0.37
CHMP2B-204ENST00000472024 DNAH11Q96DT5 4516 aa12.74□□□□□ -0.37
CHMP2B-204ENST00000472024 ZNF561-AS1K7EIQ3 104 aa12.73□□□□□ -0.37
CHMP2B-204ENST00000472024 HERV-K104P63124 156 aa12.73□□□□□ -0.37
CHMP2B-204ENST00000472024 ZNF815PA8K554 130 aa12.72□□□□□ -0.37
CHMP2B-204ENST00000472024 RTL8CO15255 209 aa12.72□□□□□ -0.37
CHMP2B-204ENST00000472024 HIGD2BQ4VC39 106 aa12.72□□□□□ -0.37
CHMP2B-204ENST00000472024 SLC25A34Q6PIV7 304 aa12.72□□□□□ -0.37
CHMP2B-204ENST00000472024 C14orf144Q96I85 54 aa12.72□□□□□ -0.37
CHMP2B-204ENST00000472024 A0A087WTM6 91 aa12.71□□□□□ -0.37
CHMP2B-204ENST00000472024 CKS1BP61024 79 aa12.7□□□□□ -0.38
CHMP2B-204ENST00000472024 CNBPP62633 177 aaKnown RBP12.7□□□□□ -0.38
CHMP2B-204ENST00000472024 UQCR10Q9UDW1 63 aa12.7□□□□□ -0.38
CHMP2B-204ENST00000472024 A0A0J9YXY3 114 aa12.69□□□□□ -0.38
CHMP2B-204ENST00000472024 TRBV30A0A0K0K1B3 111 aa12.69□□□□□ -0.38
CHMP2B-204ENST00000472024 RNF151Q2KHN1 245 aa12.69□□□□□ -0.38
CHMP2B-204ENST00000472024 C2orf82Q6UX34 121 aa12.69□□□□□ -0.38
CHMP2B-204ENST00000472024 LECT2O14960 151 aa12.68□□□□□ -0.38
CHMP2B-204ENST00000472024 TIMM17BO60830 172 aa12.68□□□□□ -0.38
CHMP2B-204ENST00000472024 SLPIP03973 132 aa12.68□□□□□ -0.38
CHMP2B-204ENST00000472024 LINC00526Q96FQ7 95 aa12.68□□□□□ -0.38
CHMP2B-204ENST00000472024 MIEN1Q9BRT3 115 aa12.68□□□□□ -0.38
CHMP2B-204ENST00000472024 HIGD1BQ9P298 99 aa12.68□□□□□ -0.38
CHMP2B-204ENST00000472024 C10orf25Q5T742 122 aa12.67□□□□□ -0.38
CHMP2B-204ENST00000472024 UNQ6190/PRO20217Q6UXQ8 127 aa12.67□□□□□ -0.38
CHMP2B-204ENST00000472024 Q8N814 137 aa12.67□□□□□ -0.38
CHMP2B-204ENST00000472024 CAMK2N2Q96S95 79 aa12.67□□□□□ -0.38
CHMP2B-204ENST00000472024 LINC00587B1AMM8 73 aa12.66□□□□□ -0.38
CHMP2B-204ENST00000472024 TSTD3H0UI37 97 aa12.66□□□□□ -0.38
CHMP2B-204ENST00000472024 SYCNQ0VAF6 134 aa12.66□□□□□ -0.38
CHMP2B-204ENST00000472024 C2orf91Q6ZV80 131 aa12.66□□□□□ -0.38
CHMP2B-204ENST00000472024 LITAFQ99732 161 aa12.66□□□□□ -0.38
CHMP2B-204ENST00000472024 PRO1933Q9H354 126 aa12.66□□□□□ -0.38
CHMP2B-204ENST00000472024 COX17Q14061 63 aa12.65□□□□□ -0.38
CHMP2B-204ENST00000472024 Q6ZRU5 148 aa12.65□□□□□ -0.38
CHMP2B-204ENST00000472024 C6orf48Q9UBA6 75 aa12.65□□□□□ -0.38
CHMP2B-204ENST00000472024 TP73-AS1Q9UF72 201 aa12.65□□□□□ -0.38
CHMP2B-204ENST00000472024 HECTD4Q9Y4D8 3996 aa12.64□□□□□ -0.39
CHMP2B-204ENST00000472024 BIRC6Q9NR09 4857 aa12.64□□□□□ -0.39
CHMP2B-204ENST00000472024 TNP2Q05952 138 aa12.63□□□□□ -0.39
CHMP2B-204ENST00000472024 CARD19Q96LW7 228 aa12.63□□□□□ -0.39
CHMP2B-204ENST00000472024 ERG28Q9UKR5 140 aa12.63□□□□□ -0.39
CHMP2B-204ENST00000472024 EPPK1P58107 5090 aaKnown RBP12.62□□□□□ -0.39
CHMP2B-204ENST00000472024 TLX1NBP0CAT3 122 aa12.62□□□□□ -0.39
CHMP2B-204ENST00000472024 SCGB1D4Q6XE38 83 aa12.62□□□□□ -0.39
CHMP2B-204ENST00000472024 SPANXB1Q9NS25 103 aaPredicted RBP12.62□□□□□ -0.39
CHMP2B-204ENST00000472024 DNAH5Q8TE73 4624 aa12.62□□□□□ -0.39
CHMP2B-204ENST00000472024 LINC00336Q6ZUF6 198 aa12.61□□□□□ -0.39
CHMP2B-204ENST00000472024 Q6ZVH6 145 aa12.6□□□□□ -0.39
CHMP2B-204ENST00000472024 PPDPFQ9H3Y8 114 aa12.6□□□□□ -0.39
CHMP2B-204ENST00000472024 PKD1P98161 4303 aa12.59□□□□□ -0.39
CHMP2B-204ENST00000472024 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.59□□□□□ -0.39
CHMP2B-204ENST00000472024 TMEM238C9JI98 176 aa12.59□□□□□ -0.39
CHMP2B-204ENST00000472024 PTTG1IPP53801 180 aa12.59□□□□□ -0.39
CHMP2B-204ENST00000472024 CIRBPQ14011 172 aaKnown RBP12.59□□□□□ -0.39
CHMP2B-204ENST00000472024 SPANXDQ9BXN6 97 aa12.59□□□□□ -0.39
CHMP2B-204ENST00000472024 SPANXCQ9NY87 97 aa12.59□□□□□ -0.39
CHMP2B-204ENST00000472024 EREGO14944 169 aa12.58□□□□□ -0.4
CHMP2B-204ENST00000472024 SMIM13P0DJ93 91 aa12.58□□□□□ -0.4
CHMP2B-204ENST00000472024 MEIG1Q5JSS6 88 aa12.58□□□□□ -0.4
CHMP2B-204ENST00000472024 C9orf163Q8N9P6 203 aa12.58□□□□□ -0.4
CHMP2B-204ENST00000472024 C9orf116Q5BN46 136 aaPredicted RBP12.57□□□□□ -0.4
CHMP2B-204ENST00000472024 ADAMTSL4-AS1Q5T5F5 129 aa12.57□□□□□ -0.4
CHMP2B-204ENST00000472024 LOC107984156A0A0G2JMH3 177 aa12.56□□□□□ -0.4
CHMP2B-204ENST00000472024 NDUFC2-KCTD14E9PQ53 114 aa12.56□□□□□ -0.4
CHMP2B-204ENST00000472024 HNRNPA3P51991 378 aaKnown RBP12.56□□□□□ -0.4
CHMP2B-204ENST00000472024 TAL2Q16559 108 aa12.56□□□□□ -0.4
CHMP2B-204ENST00000472024 ARL17AQ8IVW1 177 aa12.56□□□□□ -0.4
CHMP2B-204ENST00000472024 DDTP30046 118 aa12.55□□□□□ -0.4
CHMP2B-204ENST00000472024 DNAH8Q96JB1 4490 aa12.54□□□□□ -0.4
CHMP2B-204ENST00000472024 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.54□□□□□ -0.4
CHMP2B-204ENST00000472024 PKIGQ9Y2B9 76 aa12.54□□□□□ -0.4
CHMP2B-204ENST00000472024 IFITM1P13164 125 aa12.53□□□□□ -0.4
CHMP2B-204ENST00000472024 PFN2P35080 140 aa12.53□□□□□ -0.4
CHMP2B-204ENST00000472024 LINC00158P58513 81 aa12.53□□□□□ -0.4
CHMP2B-204ENST00000472024 MIR7-3HGQ8N6C7 128 aa12.53□□□□□ -0.4
CHMP2B-204ENST00000472024 LOC107984640A0A0U1RRK4 108 aa12.51□□□□□ -0.41
CHMP2B-204ENST00000472024 HSD52Q0P140 79 aa12.51□□□□□ -0.41
CHMP2B-204ENST00000472024 GCSHP23434 173 aa12.5□□□□□ -0.41
CHMP2B-204ENST00000472024 Q6ZRP5 223 aa12.5□□□□□ -0.41
CHMP2B-204ENST00000472024 LINC00308Q8TCZ7 52 aa12.5□□□□□ -0.41
CHMP2B-204ENST00000472024 COPS9Q8WXC6 57 aa12.49□□□□□ -0.41
CHMP2B-204ENST00000472024 SND1-IT1Q9HBX3 110 aa12.49□□□□□ -0.41
CHMP2B-204ENST00000472024 PGPEP1Q9NXJ5 209 aa12.49□□□□□ -0.41
CHMP2B-204ENST00000472024 A0A0U1RRA0 63 aa12.48□□□□□ -0.41
CHMP2B-204ENST00000472024 SRSF9Q13242 221 aaKnown RBP eCLIP12.48□□□□□ -0.41
CHMP2B-204ENST00000472024 SOSTDC1Q6X4U4 206 aa12.48□□□□□ -0.41
CHMP2B-204ENST00000472024 SDIM1Q6ZPB5 146 aa12.48□□□□□ -0.41
CHMP2B-204ENST00000472024 DAND5Q8N907 189 aa12.48□□□□□ -0.41
CHMP2B-204ENST00000472024 HIST1H4GQ99525 98 aa12.48□□□□□ -0.41
CHMP2B-204ENST00000472024 KRTAP17-1Q9BYP8 105 aa12.48□□□□□ -0.41
CHMP2B-204ENST00000472024 A0A1B0GVY2 172 aa12.47□□□□□ -0.41
CHMP2B-204ENST00000472024 C16orf90A8MZG2 172 aa12.47□□□□□ -0.41
CHMP2B-204ENST00000472024 KRTAP10-2P60368 255 aa12.47□□□□□ -0.41
CHMP2B-204ENST00000472024 CTAG1AP78358 180 aa12.47□□□□□ -0.41
CHMP2B-204ENST00000472024 IGLV5-52A0A0A0MRZ9 124 aa12.46□□□□□ -0.41
CHMP2B-204ENST00000472024 EIF4EBP3O60516 100 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms