RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 PKD1P98161 4303 aa-1.19□□□□□ -2.6
RBM39-228ENST00000471635 HECTD1Q9ULT8 2610 aa-1.19□□□□□ -2.6
RBM39-228ENST00000471635 ITPR3Q14573 2671 aa-1.19□□□□□ -2.6
RBM39-228ENST00000471635 SONP18583 2426 aaKnown RBP-1.19□□□□□ -2.6
RBM39-228ENST00000471635 A0A0G2JMZ2 1700 aa-1.19□□□□□ -2.6
RBM39-228ENST00000471635 UBE2L5PA0A1B0GUS4 154 aa-1.19□□□□□ -2.6
RBM39-228ENST00000471635 UBE2L3P68036 154 aaKnown RBP-1.19□□□□□ -2.6
RBM39-228ENST00000471635 XRN1Q8IZH2 1706 aaKnown RBP-1.19□□□□□ -2.6
RBM39-228ENST00000471635 PAPPA2Q9BXP8 1791 aa-1.19□□□□□ -2.6
RBM39-228ENST00000471635 TACC2O95359 2948 aa-1.2□□□□□ -2.6
RBM39-228ENST00000471635 MUC17Q685J3 4493 aa-1.2□□□□□ -2.6
RBM39-228ENST00000471635 FAM223BA6NKX1 122 aa-1.2□□□□□ -2.6
RBM39-228ENST00000471635 GNG11P61952 73 aa-1.2□□□□□ -2.6
RBM39-228ENST00000471635 H1FX-AS1Q4G0G2 97 aa-1.2□□□□□ -2.6
RBM39-228ENST00000471635 C9orf153Q5TBE3 101 aa-1.2□□□□□ -2.6
RBM39-228ENST00000471635 SFTA2Q6UW10 78 aa-1.2□□□□□ -2.6
RBM39-228ENST00000471635 DPH3P1Q9H4G8 78 aa-1.2□□□□□ -2.6
RBM39-228ENST00000471635 MANBALQ9NQG1 85 aa-1.2□□□□□ -2.6
RBM39-228ENST00000471635 KIAA1109Q2LD37 5005 aa-1.2□□□□□ -2.6
RBM39-228ENST00000471635 SPG11Q96JI7 2443 aa-1.2□□□□□ -2.6
RBM39-228ENST00000471635 KTN1Q86UP2 1357 aaKnown RBP-1.21□□□□□ -2.6
RBM39-228ENST00000471635 A0A1B0GWA3 101 aa-1.21□□□□□ -2.6
RBM39-228ENST00000471635 K7EP13 123 aa-1.21□□□□□ -2.6
RBM39-228ENST00000471635 AKAIN1P0CW23 69 aa-1.21□□□□□ -2.6
RBM39-228ENST00000471635 UBE2D3P61077 147 aa-1.21□□□□□ -2.6
RBM39-228ENST00000471635 UBE2D2P62837 147 aa-1.21□□□□□ -2.6
RBM39-228ENST00000471635 Q0VG73 95 aa-1.21□□□□□ -2.6
RBM39-228ENST00000471635 SPRR2FQ96RM1 72 aa-1.21□□□□□ -2.6
RBM39-228ENST00000471635 CRIPTQ9P021 101 aa-1.21□□□□□ -2.6
RBM39-228ENST00000471635 NLRP1Q9C000 1473 aa-1.21□□□□□ -2.6
RBM39-228ENST00000471635 BIRC6Q9NR09 4857 aa-1.21□□□□□ -2.6
RBM39-228ENST00000471635 KNL1Q8NG31 2342 aa-1.21□□□□□ -2.6
RBM39-228ENST00000471635 DIP2CQ9Y2E4 1556 aa-1.21□□□□□ -2.6
RBM39-228ENST00000471635 NKTRP30414 1462 aaKnown RBP-1.22□□□□□ -2.6
RBM39-228ENST00000471635 PLEKHH2Q8IVE3 1493 aa-1.22□□□□□ -2.6
RBM39-228ENST00000471635 NUP188Q5SRE5 1749 aa-1.22□□□□□ -2.6
RBM39-228ENST00000471635 SEC11AP67812 179 aa-1.22□□□□□ -2.6
RBM39-228ENST00000471635 DEFB112Q30KQ8 113 aa-1.22□□□□□ -2.6
RBM39-228ENST00000471635 PP6455Q8WZ26 134 aa-1.22□□□□□ -2.6
RBM39-228ENST00000471635 LAMA2P24043 3122 aaKnown RBP-1.22□□□□□ -2.61
RBM39-228ENST00000471635 SCAPERQ9BY12 1400 aa-1.23□□□□□ -2.61
RBM39-228ENST00000471635 MARF1Q9Y4F3 1742 aaKnown RBP-1.23□□□□□ -2.61
RBM39-228ENST00000471635 MYO18BQ8IUG5 2567 aa-1.23□□□□□ -2.61
RBM39-228ENST00000471635 F6UZH7 168 aa-1.23□□□□□ -2.61
RBM39-228ENST00000471635 MRC2Q9UBG0 1479 aa-1.24□□□□□ -2.61
RBM39-228ENST00000471635 REV3LO60673 3130 aa-1.24□□□□□ -2.61
RBM39-228ENST00000471635 PKHD1L1Q86WI1 4243 aa-1.24□□□□□ -2.61
RBM39-228ENST00000471635 COX6CP09669 75 aa-1.24□□□□□ -2.61
RBM39-228ENST00000471635 TRAPPC2P0DI81 140 aa-1.24□□□□□ -2.61
RBM39-228ENST00000471635 TRAPPC2BP0DI82 140 aa-1.24□□□□□ -2.61
RBM39-228ENST00000471635 ATP5EP56381 51 aaPredicted RBP-1.24□□□□□ -2.61
RBM39-228ENST00000471635 CUL7Q14999 1698 aa-1.24□□□□□ -2.61
RBM39-228ENST00000471635 TOP2BQ02880 1626 aa-1.25□□□□□ -2.61
RBM39-228ENST00000471635 C9orf62Q8N4C0 152 aa-1.25□□□□□ -2.61
RBM39-228ENST00000471635 TSC22D3Q99576 134 aa-1.25□□□□□ -2.61
RBM39-228ENST00000471635 LINC00846Q9NV44 126 aa-1.25□□□□□ -2.61
RBM39-228ENST00000471635 PRO1854Q9UHT4 67 aa-1.25□□□□□ -2.61
RBM39-228ENST00000471635 FAT3Q8TDW7 4589 aa-1.25□□□□□ -2.61
RBM39-228ENST00000471635 FASNP49327 2511 aaKnown RBP-1.26□□□□□ -2.61
RBM39-228ENST00000471635 A0A1B0GU69 56 aa-1.26□□□□□ -2.61
RBM39-228ENST00000471635 FAM24AA6NFZ4 105 aa-1.26□□□□□ -2.61
RBM39-228ENST00000471635 C1orf54Q8WWF1 131 aa-1.26□□□□□ -2.61
RBM39-228ENST00000471635 FAM107BQ9H098 131 aa-1.26□□□□□ -2.61
RBM39-228ENST00000471635 CCDC141Q6ZP82 1450 aa-1.26□□□□□ -2.61
RBM39-228ENST00000471635 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.27□□□□□ -2.61
RBM39-228ENST00000471635 A0A087WVE0 104 aa-1.27□□□□□ -2.61
RBM39-228ENST00000471635 SAA2P0DJI9 122 aaPredicted RBP-1.27□□□□□ -2.61
RBM39-228ENST00000471635 ROCK2O75116 1388 aaKnown RBP-1.27□□□□□ -2.61
RBM39-228ENST00000471635 TEP1Q99973 2627 aaKnown RBP-1.28□□□□□ -2.61
RBM39-228ENST00000471635 MYOM2P54296 1465 aa-1.28□□□□□ -2.61
RBM39-228ENST00000471635 MT1AP04731 61 aa-1.28□□□□□ -2.61
RBM39-228ENST00000471635 S100A12P80511 92 aa-1.28□□□□□ -2.61
RBM39-228ENST00000471635 C12orf57Q99622 126 aa-1.28□□□□□ -2.61
RBM39-228ENST00000471635 DNAH9Q9NYC9 4486 aa-1.28□□□□□ -2.61
RBM39-228ENST00000471635 VPS13DQ5THJ4 4388 aa-1.28□□□□□ -2.61
RBM39-228ENST00000471635 DNAH3Q8TD57 4116 aa-1.29□□□□□ -2.62
RBM39-228ENST00000471635 HTTP42858 3142 aa-1.29□□□□□ -2.62
RBM39-228ENST00000471635 NAP1L6A6NFF2 107 aa-1.29□□□□□ -2.62
RBM39-228ENST00000471635 I3L3M4 83 aa-1.29□□□□□ -2.62
RBM39-228ENST00000471635 SNAPC5O75971 98 aa-1.29□□□□□ -2.62
RBM39-228ENST00000471635 C6orf201Q7Z4U5 140 aa-1.29□□□□□ -2.62
RBM39-228ENST00000471635 AKAP13Q12802 2813 aa-1.29□□□□□ -2.62
RBM39-228ENST00000471635 LAMA1P25391 3075 aa-1.29□□□□□ -2.62
RBM39-228ENST00000471635 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.29□□□□□ -2.627e-13■■■■□ 20.5
RBM39-228ENST00000471635 SLIT1O75093 1534 aa-1.3□□□□□ -2.62
RBM39-228ENST00000471635 EDC4Q6P2E9 1401 aaKnown RBP-1.3□□□□□ -2.62
RBM39-228ENST00000471635 PDCD11Q14690 1871 aaKnown RBP-1.31□□□□□ -2.62
RBM39-228ENST00000471635 TNRC18O15417 2968 aaPredicted RBP-1.31□□□□□ -2.62
RBM39-228ENST00000471635 PRRC2CQ9Y520 2896 aaKnown RBP-1.31□□□□□ -2.62
RBM39-228ENST00000471635 IER3IP1Q9Y5U9 82 aa-1.31□□□□□ -2.62
RBM39-228ENST00000471635 ADAMTS12P58397 1594 aa-1.31□□□□□ -2.62
RBM39-228ENST00000471635 NALCNQ8IZF0 1738 aa-1.32□□□□□ -2.62
RBM39-228ENST00000471635 COL4A6Q14031 1691 aa-1.32□□□□□ -2.62
RBM39-228ENST00000471635 PTPN23Q9H3S7 1636 aa-1.32□□□□□ -2.62
RBM39-228ENST00000471635 CRYM-AS1A6NIL9 109 aa-1.32□□□□□ -2.62
RBM39-228ENST00000471635 HSD52Q0P140 79 aa-1.32□□□□□ -2.62
RBM39-228ENST00000471635 LELP1Q5T871 98 aa-1.32□□□□□ -2.62
RBM39-228ENST00000471635 AKAP9Q99996 3911 aa-1.33□□□□□ -2.62
RBM39-228ENST00000471635 ARHGAP5Q13017 1502 aa-1.33□□□□□ -2.62
RBM39-228ENST00000471635 HMGN1P05114 100 aa-1.33□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms