RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 PRSS2P07478 247 aa12.84□□□□□ -0.35
SREBF1-210ENST00000471445 C1orf137Q5JT78 98 aa12.84□□□□□ -0.35
SREBF1-210ENST00000471445 TOMM7Q9P0U1 55 aa12.84□□□□□ -0.35
SREBF1-210ENST00000471445 LINC01549A6NIU2 74 aa12.83□□□□□ -0.36
SREBF1-210ENST00000471445 KRTAP11-1Q8IUC1 163 aa12.83□□□□□ -0.36
SREBF1-210ENST00000471445 SCGB3A1Q96QR1 104 aa12.83□□□□□ -0.36
SREBF1-210ENST00000471445 GEMIN7Q9H840 131 aaKnown RBP12.83□□□□□ -0.36
SREBF1-210ENST00000471445 C9orf129Q5T035 196 aaKnown RBP12.82□□□□□ -0.36
SREBF1-210ENST00000471445 MRPL18Q9H0U6 180 aaKnown RBP12.82□□□□□ -0.36
SREBF1-210ENST00000471445 M0QXV9 152 aa12.81□□□□□ -0.36
SREBF1-210ENST00000471445 KRTAP10-8P60410 259 aa12.81□□□□□ -0.36
SREBF1-210ENST00000471445 CKS1BP61024 79 aa12.81□□□□□ -0.36
SREBF1-210ENST00000471445 RPS10P5Q9NQ39 176 aa12.81□□□□□ -0.36
SREBF1-210ENST00000471445 C6orf226Q5I0X4 101 aa12.8□□□□□ -0.36
SREBF1-210ENST00000471445 IGLV5-45A0A087WSX0 123 aa12.79□□□□□ -0.36
SREBF1-210ENST00000471445 IGLV7-43P04211 117 aa12.79□□□□□ -0.36
SREBF1-210ENST00000471445 FABP9Q0Z7S8 132 aa12.79□□□□□ -0.36
SREBF1-210ENST00000471445 TINCRA0A1B0GVN0 87 aa12.78□□□□□ -0.36
SREBF1-210ENST00000471445 SMIM1B2RUZ4 78 aa12.78□□□□□ -0.36
SREBF1-210ENST00000471445 CXCL5P42830 114 aa12.78□□□□□ -0.36
SREBF1-210ENST00000471445 FA2HQ7L5A8 372 aa12.78□□□□□ -0.36
SREBF1-210ENST00000471445 LINC00469Q8N7U9 141 aa12.78□□□□□ -0.36
SREBF1-210ENST00000471445 F8VRH5 84 aa12.77□□□□□ -0.37
SREBF1-210ENST00000471445 ODF1Q14990 250 aa12.77□□□□□ -0.37
SREBF1-210ENST00000471445 SMCO4Q9NRQ5 59 aa12.77□□□□□ -0.37
SREBF1-210ENST00000471445 PDZD11Q5EBL8 140 aa12.75□□□□□ -0.37
SREBF1-210ENST00000471445 CST9LQ9H4G1 147 aa12.75□□□□□ -0.37
SREBF1-210ENST00000471445 UBE2BP63146 152 aa12.74□□□□□ -0.37
SREBF1-210ENST00000471445 PMVKQ15126 192 aa12.74□□□□□ -0.37
SREBF1-210ENST00000471445 A0A096LNJ9 63 aa12.73□□□□□ -0.37
SREBF1-210ENST00000471445 DIRC1Q969H9 104 aa12.73□□□□□ -0.37
SREBF1-210ENST00000471445 COX7B2Q8TF08 81 aa12.72□□□□□ -0.37
SREBF1-210ENST00000471445 URB1-AS1Q96HZ7 61 aa12.72□□□□□ -0.37
SREBF1-210ENST00000471445 XAGE1AQ9HD64 81 aa12.72□□□□□ -0.37
SREBF1-210ENST00000471445 H0Y9J4 135 aa12.71□□□□□ -0.37
SREBF1-210ENST00000471445 C18orf32Q8TCD1 76 aa12.71□□□□□ -0.37
SREBF1-210ENST00000471445 TRAPPC1Q9Y5R8 145 aa12.71□□□□□ -0.37
SREBF1-210ENST00000471445 APOC3P02656 99 aa12.69□□□□□ -0.38
SREBF1-210ENST00000471445 SPINK8P0C7L1 97 aa12.69□□□□□ -0.38
SREBF1-210ENST00000471445 IGLC3P0DOY3 106 aa12.68□□□□□ -0.38
SREBF1-210ENST00000471445 C22orf24Q9Y442 160 aa12.68□□□□□ -0.38
SREBF1-210ENST00000471445 SNAPINO95295 136 aa12.67□□□□□ -0.38
SREBF1-210ENST00000471445 HBDP02042 147 aa12.66□□□□□ -0.38
SREBF1-210ENST00000471445 LINC00614P0C842 121 aa12.66□□□□□ -0.38
SREBF1-210ENST00000471445 NDUFA5Q16718 116 aa12.66□□□□□ -0.38
SREBF1-210ENST00000471445 SVBPQ8N300 66 aa12.66□□□□□ -0.38
SREBF1-210ENST00000471445 TP73-AS1Q9UF72 201 aa12.66□□□□□ -0.38
SREBF1-210ENST00000471445 H3BRM9 83 aa12.65□□□□□ -0.38
SREBF1-210ENST00000471445 LRP2P98164 4655 aa12.64□□□□□ -0.39
SREBF1-210ENST00000471445 NUPR1O60356 82 aa12.64□□□□□ -0.39
SREBF1-210ENST00000471445 KRTAP1-4P0C5Y4 121 aa12.64□□□□□ -0.39
SREBF1-210ENST00000471445 LBHQ53QV2 105 aaPredicted RBP12.64□□□□□ -0.39
SREBF1-210ENST00000471445 IGLV5-39A0A0G2JS06 123 aa12.63□□□□□ -0.39
SREBF1-210ENST00000471445 ZNF22P17026 224 aaPredicted RBP12.63□□□□□ -0.39
SREBF1-210ENST00000471445 PMCHL1Q16048 86 aa12.63□□□□□ -0.39
SREBF1-210ENST00000471445 PRR26Q8N8Z3 221 aa12.63□□□□□ -0.39
SREBF1-210ENST00000471445 MRPL55Q7Z7F7 128 aaKnown RBP12.62□□□□□ -0.39
SREBF1-210ENST00000471445 NDUFA6P56556 154 aa12.6□□□□□ -0.39
SREBF1-210ENST00000471445 RAB5BP61020 215 aa12.6□□□□□ -0.39
SREBF1-210ENST00000471445 YPEL4Q96NS1 127 aa12.6□□□□□ -0.39
SREBF1-210ENST00000471445 IGLV1-50A0A075B6I6 118 aa12.59□□□□□ -0.39
SREBF1-210ENST00000471445 ZNF861PO60384 105 aa12.59□□□□□ -0.39
SREBF1-210ENST00000471445 ATP5LO75964 103 aa12.59□□□□□ -0.39
SREBF1-210ENST00000471445 IGLV5-37A0A075B6J1 123 aa12.58□□□□□ -0.4
SREBF1-210ENST00000471445 C11orf86A6NJI1 115 aa12.56□□□□□ -0.4
SREBF1-210ENST00000471445 LINC00167Q96N53 147 aa12.56□□□□□ -0.4
SREBF1-210ENST00000471445 BAGE3Q86Y29 109 aa12.55□□□□□ -0.4
SREBF1-210ENST00000471445 BCE1O60756 84 aa12.54□□□□□ -0.4
SREBF1-210ENST00000471445 RPL37AP8A6NKH3 93 aa12.52□□□□□ -0.41
SREBF1-210ENST00000471445 PFN2P35080 140 aa12.52□□□□□ -0.41
SREBF1-210ENST00000471445 CHCHD1Q96BP2 118 aaKnown RBP12.52□□□□□ -0.41
SREBF1-210ENST00000471445 ERG28Q9UKR5 140 aa12.52□□□□□ -0.41
SREBF1-210ENST00000471445 GAGE10A6NGK3 116 aa12.51□□□□□ -0.41
SREBF1-210ENST00000471445 RPL13AP40429 203 aaKnown RBP12.51□□□□□ -0.41
SREBF1-210ENST00000471445 TMEM170BQ5T4T1 132 aa12.51□□□□□ -0.41
SREBF1-210ENST00000471445 NKAPP1Q8N9T2 125 aa12.51□□□□□ -0.41
SREBF1-210ENST00000471445 RPL28P46779 137 aaKnown RBP12.5□□□□□ -0.41
SREBF1-210ENST00000471445 SFTA2Q6UW10 78 aa12.5□□□□□ -0.41
SREBF1-210ENST00000471445 CHTOPQ9Y3Y2 248 aaKnown RBP12.5□□□□□ -0.41
SREBF1-210ENST00000471445 COX17Q14061 63 aa12.49□□□□□ -0.41
SREBF1-210ENST00000471445 SND1-IT1Q9HBX3 110 aa12.49□□□□□ -0.41
SREBF1-210ENST00000471445 TRAV12-1A0A0B4J245 112 aa12.48□□□□□ -0.41
SREBF1-210ENST00000471445 CBLN2Q8IUK8 224 aa12.48□□□□□ -0.41
SREBF1-210ENST00000471445 ZNF625Q96I27 306 aaPredicted RBP12.48□□□□□ -0.41
SREBF1-210ENST00000471445 RNF213Q63HN8 5207 aa12.47□□□□□ -0.41
SREBF1-210ENST00000471445 VPREB1P12018 145 aa12.47□□□□□ -0.41
SREBF1-210ENST00000471445 KRTAP13-1Q8IUC0 172 aa12.47□□□□□ -0.41
SREBF1-210ENST00000471445 IFI27L1Q96BM0 104 aa12.47□□□□□ -0.41
SREBF1-210ENST00000471445 SCO1O75880 301 aa12.46□□□□□ -0.41
SREBF1-210ENST00000471445 IGKV2-28A0A075B6P5 120 aa12.44□□□□□ -0.42
SREBF1-210ENST00000471445 TMEM223A0PJW6 202 aa12.44□□□□□ -0.42
SREBF1-210ENST00000471445 IGKV2D-28P01615 120 aa12.44□□□□□ -0.42
SREBF1-210ENST00000471445 HSBP1O75506 76 aa12.43□□□□□ -0.42
SREBF1-210ENST00000471445 Q8NDZ9 215 aa12.43□□□□□ -0.42
SREBF1-210ENST00000471445 RPL24P83731 157 aaKnown RBP12.42□□□□□ -0.42
SREBF1-210ENST00000471445 LPAP08519 4548 aa12.41□□□□□ -0.42
SREBF1-210ENST00000471445 A0A087X002 238 aa12.41□□□□□ -0.42
SREBF1-210ENST00000471445 UBE2AP49459 152 aa12.41□□□□□ -0.42
SREBF1-210ENST00000471445 FAM19A2Q8N3H0 131 aa12.4□□□□□ -0.42
SREBF1-210ENST00000471445 TRGC2P03986 189 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms