RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 TRAV8-4A0A0B4J246 113 aa11.84□□□□□ -0.51
HSPG2-208ENST00000471322 IFITM1P13164 125 aa11.84□□□□□ -0.51
HSPG2-208ENST00000471322 MIAQ16674 131 aa11.84□□□□□ -0.51
HSPG2-208ENST00000471322 COPS9Q8WXC6 57 aa11.84□□□□□ -0.51
HSPG2-208ENST00000471322 CRPP02741 224 aa11.83□□□□□ -0.52
HSPG2-208ENST00000471322 PRSS2P07478 247 aa11.83□□□□□ -0.52
HSPG2-208ENST00000471322 RAB37Q96AX2 223 aa11.83□□□□□ -0.52
HSPG2-208ENST00000471322 TOMM7Q9P0U1 55 aa11.83□□□□□ -0.52
HSPG2-208ENST00000471322 VAMP3Q15836 100 aa11.82□□□□□ -0.52
HSPG2-208ENST00000471322 WFDC10BQ8IUB3 73 aa11.82□□□□□ -0.52
HSPG2-208ENST00000471322 MUSTN1Q8IVN3 82 aa11.82□□□□□ -0.52
HSPG2-208ENST00000471322 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.82□□□□□ -0.52
HSPG2-208ENST00000471322 K7ERJ3 54 aa11.82□□□□□ -0.52
HSPG2-208ENST00000471322 IGHV3-33P01772 117 aa11.82□□□□□ -0.52
HSPG2-208ENST00000471322 ADAMTSL4-AS1Q5T5F5 129 aa11.82□□□□□ -0.52
HSPG2-208ENST00000471322 MALP21145 153 aa11.81□□□□□ -0.52
HSPG2-208ENST00000471322 C6orf226Q5I0X4 101 aa11.81□□□□□ -0.52
HSPG2-208ENST00000471322 LINC01556Q5JQF7 62 aa11.81□□□□□ -0.52
HSPG2-208ENST00000471322 MEIG1Q5JSS6 88 aa11.81□□□□□ -0.52
HSPG2-208ENST00000471322 ENHOQ6UWT2 76 aa11.81□□□□□ -0.52
HSPG2-208ENST00000471322 Q8IZM0 81 aa11.81□□□□□ -0.52
HSPG2-208ENST00000471322 IGLV10-54A0A075B6I4 117 aa11.8□□□□□ -0.52
HSPG2-208ENST00000471322 H3BUT2 72 aa11.8□□□□□ -0.52
HSPG2-208ENST00000471322 FOXI1Q12951 378 aa11.8□□□□□ -0.52
HSPG2-208ENST00000471322 APOMO95445 188 aa11.79□□□□□ -0.52
HSPG2-208ENST00000471322 UBE2WQ96B02 151 aa11.79□□□□□ -0.52
HSPG2-208ENST00000471322 A4D1N5 150 aa11.78□□□□□ -0.52
HSPG2-208ENST00000471322 GAGE12HA6NDE8 117 aa11.78□□□□□ -0.52
HSPG2-208ENST00000471322 CCL18P55774 89 aa11.78□□□□□ -0.52
HSPG2-208ENST00000471322 UBE2DNLQ8IWF7 75 aa11.78□□□□□ -0.52
HSPG2-208ENST00000471322 CFC1BP0CG36 223 aa11.78□□□□□ -0.52
HSPG2-208ENST00000471322 CFC1P0CG37 223 aa11.78□□□□□ -0.52
HSPG2-208ENST00000471322 CXCL5P42830 114 aa11.78□□□□□ -0.52
HSPG2-208ENST00000471322 PPDPFQ9H3Y8 114 aa11.78□□□□□ -0.52
HSPG2-208ENST00000471322 FRAS1Q86XX4 4008 aa11.77□□□□□ -0.53
HSPG2-208ENST00000471322 A0A1W2PPM0 123 aa11.77□□□□□ -0.53
HSPG2-208ENST00000471322 A0A0B4J2C4 111 aa11.76□□□□□ -0.53
HSPG2-208ENST00000471322 IBA57-AS1B1ANH7 110 aa11.76□□□□□ -0.53
HSPG2-208ENST00000471322 DNAH10OSP0CZ25 163 aa11.76□□□□□ -0.53
HSPG2-208ENST00000471322 FABP2P12104 132 aa11.76□□□□□ -0.53
HSPG2-208ENST00000471322 UBE2V1Q13404 147 aa11.76□□□□□ -0.53
HSPG2-208ENST00000471322 CFAP161Q6P656 301 aa11.76□□□□□ -0.53
HSPG2-208ENST00000471322 CKS1BP61024 79 aa11.75□□□□□ -0.53
HSPG2-208ENST00000471322 PRO1854Q9UHT4 67 aa11.75□□□□□ -0.53
HSPG2-208ENST00000471322 DNAH2Q9P225 4427 aa11.75□□□□□ -0.53
HSPG2-208ENST00000471322 GTF2H5Q6ZYL4 71 aa11.75□□□□□ -0.53
HSPG2-208ENST00000471322 LINC00308Q8TCZ7 52 aa11.75□□□□□ -0.53
HSPG2-208ENST00000471322 PGPEP1Q9NXJ5 209 aa11.74□□□□□ -0.53
HSPG2-208ENST00000471322 LINC00588Q9Y4M8 146 aa11.74□□□□□ -0.53
HSPG2-208ENST00000471322 DNAH6Q9C0G6 4158 aa11.73□□□□□ -0.53
HSPG2-208ENST00000471322 KIAA0087Q14695 138 aa11.73□□□□□ -0.53
HSPG2-208ENST00000471322 GAGE10A6NGK3 116 aa11.72□□□□□ -0.53
HSPG2-208ENST00000471322 M0R2N4 97 aa11.72□□□□□ -0.53
HSPG2-208ENST00000471322 DAND5Q8N907 189 aa11.72□□□□□ -0.53
HSPG2-208ENST00000471322 NAA38Q9BRA0 125 aaKnown RBP11.72□□□□□ -0.53
HSPG2-208ENST00000471322 A0A0U1RRA0 63 aa11.71□□□□□ -0.53
HSPG2-208ENST00000471322 LINC00158P58513 81 aa11.71□□□□□ -0.53
HSPG2-208ENST00000471322 UPK3BQ9BT76 320 aa11.71□□□□□ -0.53
HSPG2-208ENST00000471322 ERG28Q9UKR5 140 aa11.71□□□□□ -0.54
HSPG2-208ENST00000471322 NPC2P61916 151 aa11.7□□□□□ -0.54
HSPG2-208ENST00000471322 C1orf43Q9BWL3 253 aa11.7□□□□□ -0.54
HSPG2-208ENST00000471322 SPCS1Q9Y6A9 102 aa11.7□□□□□ -0.54
HSPG2-208ENST00000471322 EPPK1P58107 5090 aaKnown RBP11.69□□□□□ -0.54
HSPG2-208ENST00000471322 K7EP34 96 aa11.69□□□□□ -0.54
HSPG2-208ENST00000471322 TSPAN13O95857 204 aa11.69□□□□□ -0.54
HSPG2-208ENST00000471322 SPAG11BQ08648 103 aa11.69□□□□□ -0.54
HSPG2-208ENST00000471322 COX17Q14061 63 aa11.69□□□□□ -0.54
HSPG2-208ENST00000471322 LYRM7Q5U5X0 104 aa11.69□□□□□ -0.54
HSPG2-208ENST00000471322 MIR7-3HGQ8N6C7 128 aa11.68□□□□□ -0.54
HSPG2-208ENST00000471322 DNAH10Q8IVF4 4471 aa11.68□□□□□ -0.54
HSPG2-208ENST00000471322 KRTAP26-1Q6PEX3 210 aa11.68□□□□□ -0.54
HSPG2-208ENST00000471322 C2orf82Q6UX34 121 aa11.67□□□□□ -0.54
HSPG2-208ENST00000471322 EIF4EBP3O60516 100 aaPredicted RBP11.66□□□□□ -0.54
HSPG2-208ENST00000471322 PFN2P35080 140 aa11.66□□□□□ -0.54
HSPG2-208ENST00000471322 SOSTDC1Q6X4U4 206 aa11.65□□□□□ -0.54
HSPG2-208ENST00000471322 IGKV2D-24A0A075B6R9 120 aa11.64□□□□□ -0.55
HSPG2-208ENST00000471322 RMI2Q96E14 147 aa11.64□□□□□ -0.55
HSPG2-208ENST00000471322 F8WDY8 70 aa11.63□□□□□ -0.55
HSPG2-208ENST00000471322 GVQW2A0A096LPI5 108 aaPredicted RBP11.62□□□□□ -0.55
HSPG2-208ENST00000471322 LOC107984156A0A0G2JMH3 177 aa11.62□□□□□ -0.55
HSPG2-208ENST00000471322 ZNF561-AS1K7EIQ3 104 aa11.62□□□□□ -0.55
HSPG2-208ENST00000471322 PSMB2P49721 201 aa11.62□□□□□ -0.55
HSPG2-208ENST00000471322 Q1RN00 199 aa11.62□□□□□ -0.55
HSPG2-208ENST00000471322 ARL17AQ8IVW1 177 aa11.62□□□□□ -0.55
HSPG2-208ENST00000471322 NTN5Q8WTR8 489 aaPredicted RBP11.62□□□□□ -0.55
HSPG2-208ENST00000471322 SND1-IT1Q9HBX3 110 aa11.61□□□□□ -0.55
HSPG2-208ENST00000471322 FAT2Q9NYQ8 4349 aa11.61□□□□□ -0.55
HSPG2-208ENST00000471322 H7C2G1 150 aa11.6□□□□□ -0.55
HSPG2-208ENST00000471322 SCGB1C2P0DMR2 95 aa11.6□□□□□ -0.55
HSPG2-208ENST00000471322 TRBV20-1A0A075B6N2 111 aa11.6□□□□□ -0.55
HSPG2-208ENST00000471322 TRAV13-2A0A0B4J235 113 aa11.6□□□□□ -0.55
HSPG2-208ENST00000471322 TRBV30A0A0K0K1B3 111 aa11.6□□□□□ -0.55
HSPG2-208ENST00000471322 UNQ6190/PRO20217Q6UXQ8 127 aa11.6□□□□□ -0.55
HSPG2-208ENST00000471322 C2orf48Q96LS8 159 aa11.6□□□□□ -0.55
HSPG2-208ENST00000471322 Q9HAA7 133 aa11.6□□□□□ -0.55
HSPG2-208ENST00000471322 RPL13AP40429 203 aaKnown RBP11.59□□□□□ -0.55
HSPG2-208ENST00000471322 Q6ZR54 194 aa11.59□□□□□ -0.55
HSPG2-208ENST00000471322 C6orf223Q8N319 242 aa11.59□□□□□ -0.55
HSPG2-208ENST00000471322 NBDYA0A0U1RRE5 68 aa11.58□□□□□ -0.56
HSPG2-208ENST00000471322 KRTAP1-5Q9BYS1 174 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms