RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 HIST1H2BOP23527 126 aa12.53□□□□□ -0.4
HDAC7-220ENST00000471235 HIST1H2BBP33778 126 aa12.53□□□□□ -0.4
HDAC7-220ENST00000471235 HIST1H2BDP58876 126 aa12.53□□□□□ -0.4
HDAC7-220ENST00000471235 HIST1H2BCP62807 126 aa12.53□□□□□ -0.4
HDAC7-220ENST00000471235 HIST2H2BEQ16778 126 aa12.53□□□□□ -0.4
HDAC7-220ENST00000471235 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.53□□□□□ -0.4
HDAC7-220ENST00000471235 HIST1H2BHQ93079 126 aa12.53□□□□□ -0.4
HDAC7-220ENST00000471235 HIST1H2BNQ99877 126 aa12.53□□□□□ -0.4
HDAC7-220ENST00000471235 HIST1H2BMQ99879 126 aa12.53□□□□□ -0.4
HDAC7-220ENST00000471235 FAM229AH3BQW9 127 aa12.52□□□□□ -0.41
HDAC7-220ENST00000471235 SPINK8P0C7L1 97 aa12.52□□□□□ -0.41
HDAC7-220ENST00000471235 ZNF22P17026 224 aaPredicted RBP12.52□□□□□ -0.41
HDAC7-220ENST00000471235 PTTG1IPP53801 180 aa12.52□□□□□ -0.41
HDAC7-220ENST00000471235 PLAC8Q9NZF1 115 aa12.52□□□□□ -0.41
HDAC7-220ENST00000471235 C11orf86A6NJI1 115 aa12.51□□□□□ -0.41
HDAC7-220ENST00000471235 RPL18AQ02543 176 aaKnown RBP12.51□□□□□ -0.41
HDAC7-220ENST00000471235 DPH3Q96FX2 82 aa12.51□□□□□ -0.41
HDAC7-220ENST00000471235 TRAV12-1A0A0B4J245 112 aa12.5□□□□□ -0.41
HDAC7-220ENST00000471235 H3BRM9 83 aa12.5□□□□□ -0.41
HDAC7-220ENST00000471235 GAGE2BQ13066 116 aa12.5□□□□□ -0.41
HDAC7-220ENST00000471235 LINC00474Q9P2X8 69 aa12.5□□□□□ -0.41
HDAC7-220ENST00000471235 CHTOPQ9Y3Y2 248 aaKnown RBP12.5□□□□□ -0.41
HDAC7-220ENST00000471235 PCLOQ9Y6V0 5065 aa12.49□□□□□ -0.41
HDAC7-220ENST00000471235 TRBV30A0A0K0K1B3 111 aa12.49□□□□□ -0.41
HDAC7-220ENST00000471235 LEPROTL1O95214 131 aa12.49□□□□□ -0.41
HDAC7-220ENST00000471235 C6orf226Q5I0X4 101 aa12.49□□□□□ -0.41
HDAC7-220ENST00000471235 STPG4Q8N801 248 aa12.49□□□□□ -0.41
HDAC7-220ENST00000471235 COX7B2Q8TF08 81 aa12.49□□□□□ -0.41
HDAC7-220ENST00000471235 TLX1NBP0CAT3 122 aa12.48□□□□□ -0.41
HDAC7-220ENST00000471235 CKS1BP61024 79 aa12.48□□□□□ -0.41
HDAC7-220ENST00000471235 F8VRH5 84 aa12.46□□□□□ -0.41
HDAC7-220ENST00000471235 CXCL5P42830 114 aa12.46□□□□□ -0.41
HDAC7-220ENST00000471235 IGLV5-39A0A0G2JS06 123 aa12.45□□□□□ -0.42
HDAC7-220ENST00000471235 PLA2G1BP04054 148 aaKnown RBP12.45□□□□□ -0.42
HDAC7-220ENST00000471235 C9orf116Q5BN46 136 aaPredicted RBP12.45□□□□□ -0.42
HDAC7-220ENST00000471235 TMEM170BQ5T4T1 132 aa12.45□□□□□ -0.42
HDAC7-220ENST00000471235 Q6ZRP5 223 aa12.45□□□□□ -0.42
HDAC7-220ENST00000471235 HSPB8Q9UJY1 196 aa12.45□□□□□ -0.42
HDAC7-220ENST00000471235 H0Y8G0 127 aa12.44□□□□□ -0.42
HDAC7-220ENST00000471235 FABP4P15090 132 aa12.44□□□□□ -0.42
HDAC7-220ENST00000471235 KRTAP10-4P60372 401 aaPredicted RBP12.43□□□□□ -0.42
HDAC7-220ENST00000471235 ODF1Q14990 250 aa12.43□□□□□ -0.42
HDAC7-220ENST00000471235 NDUFC2-KCTD14E9PQ53 114 aa12.42□□□□□ -0.42
HDAC7-220ENST00000471235 RPL37AP61513 92 aaKnown RBP12.41□□□□□ -0.42
HDAC7-220ENST00000471235 GAGE2EQ4V326 116 aa12.41□□□□□ -0.42
HDAC7-220ENST00000471235 GAGE2DQ9UEU5 116 aa12.41□□□□□ -0.42
HDAC7-220ENST00000471235 A0A1W2PNN7 141 aa12.4□□□□□ -0.42
HDAC7-220ENST00000471235 SRRM2Q9UQ35 2752 aaKnown RBP12.39□□□□□ -0.43
HDAC7-220ENST00000471235 TMEM223A0PJW6 202 aa12.39□□□□□ -0.43
HDAC7-220ENST00000471235 INAFM2P0DMQ5 153 aa12.39□□□□□ -0.43
HDAC7-220ENST00000471235 COA6Q5JTJ3 125 aaKnown RBP12.39□□□□□ -0.43
HDAC7-220ENST00000471235 C7orf33Q8WU49 177 aa12.38□□□□□ -0.43
HDAC7-220ENST00000471235 FAM168BA1KXE4 195 aa12.36□□□□□ -0.43
HDAC7-220ENST00000471235 C9orf129Q5T035 196 aaKnown RBP12.36□□□□□ -0.43
HDAC7-220ENST00000471235 MAP1LC3CQ9BXW4 147 aa12.36□□□□□ -0.43
HDAC7-220ENST00000471235 PKHD1L1Q86WI1 4243 aa12.35□□□□□ -0.43
HDAC7-220ENST00000471235 PMCHL2Q9BQD1 86 aa12.35□□□□□ -0.43
HDAC7-220ENST00000471235 PLNP26678 52 aa12.34□□□□□ -0.43
HDAC7-220ENST00000471235 FAM19A5Q7Z5A7 132 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-220ENST00000471235 KRTAP7-1Q8IUC3 87 aa12.33□□□□□ -0.44
HDAC7-220ENST00000471235 FLG2Q5D862 2391 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-220ENST00000471235 DPM2O94777 84 aa12.32□□□□□ -0.44
HDAC7-220ENST00000471235 PHF5AQ7RTV0 110 aaKnown RBP12.32□□□□□ -0.44
HDAC7-220ENST00000471235 ZNF625Q96I27 306 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-220ENST00000471235 XAGE1AQ9HD64 81 aa12.32□□□□□ -0.44
HDAC7-220ENST00000471235 SYS1-DBNDD2H3BUS1 97 aa12.3□□□□□ -0.44
HDAC7-220ENST00000471235 IGKCP01834 107 aa12.3□□□□□ -0.44
HDAC7-220ENST00000471235 HNRNPA3P51991 378 aaKnown RBP12.3□□□□□ -0.44
HDAC7-220ENST00000471235 PRR3P79522 188 aaKnown RBP12.3□□□□□ -0.44
HDAC7-220ENST00000471235 SFTA2Q6UW10 78 aa12.3□□□□□ -0.44
HDAC7-220ENST00000471235 ERG28Q9UKR5 140 aa12.29□□□□□ -0.44
HDAC7-220ENST00000471235 M0QXV9 152 aa12.28□□□□□ -0.44
HDAC7-220ENST00000471235 PFN2P35080 140 aa12.28□□□□□ -0.44
HDAC7-220ENST00000471235 SERTAD4-AS1Q5TG53 156 aa12.27□□□□□ -0.45
HDAC7-220ENST00000471235 C3orf79P0CE67 100 aa12.26□□□□□ -0.45
HDAC7-220ENST00000471235 TSPEAR-AS2P59090 65 aa12.26□□□□□ -0.45
HDAC7-220ENST00000471235 LINC01545Q5VT33 79 aa12.26□□□□□ -0.45
HDAC7-220ENST00000471235 LEPROTO15243 131 aa12.25□□□□□ -0.45
HDAC7-220ENST00000471235 HERVK_113P61574 105 aa12.25□□□□□ -0.45
HDAC7-220ENST00000471235 PET117Q6UWS5 81 aa12.25□□□□□ -0.45
HDAC7-220ENST00000471235 PLEKHB2Q96CS7 222 aa12.24□□□□□ -0.45
HDAC7-220ENST00000471235 KRTDAPP60985 99 aa12.23□□□□□ -0.45
HDAC7-220ENST00000471235 COX17Q14061 63 aa12.23□□□□□ -0.45
HDAC7-220ENST00000471235 KRTAP11-1Q8IUC1 163 aa12.23□□□□□ -0.45
HDAC7-220ENST00000471235 MYCBP2O75592 4640 aa12.23□□□□□ -0.45
HDAC7-220ENST00000471235 NDUFA12Q9UI09 145 aa12.22□□□□□ -0.45
HDAC7-220ENST00000471235 PSORS1C2Q9UIG4 136 aa12.22□□□□□ -0.45
HDAC7-220ENST00000471235 SND1-IT1Q9HBX3 110 aa12.21□□□□□ -0.45
HDAC7-220ENST00000471235 PLA2G2DQ9UNK4 145 aa12.21□□□□□ -0.45
HDAC7-220ENST00000471235 J3QQQ9 107 aa12.2□□□□□ -0.46
HDAC7-220ENST00000471235 HERV-K104P63124 156 aa12.2□□□□□ -0.46
HDAC7-220ENST00000471235 HIST3H2BBQ8N257 126 aa12.2□□□□□ -0.46
HDAC7-220ENST00000471235 C22orf24Q9Y442 160 aa12.2□□□□□ -0.46
HDAC7-220ENST00000471235 MYMXA0A1B0GTQ4 84 aa12.19□□□□□ -0.46
HDAC7-220ENST00000471235 UBE2BP63146 152 aa12.19□□□□□ -0.46
HDAC7-220ENST00000471235 LINC00158P58513 81 aa12.18□□□□□ -0.46
HDAC7-220ENST00000471235 MEIG1Q5JSS6 88 aa12.18□□□□□ -0.46
HDAC7-220ENST00000471235 TP73-AS1Q9UF72 201 aa12.18□□□□□ -0.46
HDAC7-220ENST00000471235 IGLV5-37A0A075B6J1 123 aa12.17□□□□□ -0.46
HDAC7-220ENST00000471235 A0A0U1RRA0 63 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms