RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 IGLC3P0DOY3 106 aa9.55□□□□□ -0.88
ABCF3-208ENST00000471226 RPL37AP61513 92 aaKnown RBP9.55□□□□□ -0.88
ABCF3-208ENST00000471226 BAGE3Q86Y29 109 aa9.55□□□□□ -0.88
ABCF3-208ENST00000471226 TOMM7Q9P0U1 55 aa9.55□□□□□ -0.88
ABCF3-208ENST00000471226 SCO1O75880 301 aa9.54□□□□□ -0.88
ABCF3-208ENST00000471226 NDUFA6P56556 154 aa9.54□□□□□ -0.88
ABCF3-208ENST00000471226 RPL18AQ02543 176 aaKnown RBP9.54□□□□□ -0.88
ABCF3-208ENST00000471226 C6orf226Q5I0X4 101 aa9.54□□□□□ -0.88
ABCF3-208ENST00000471226 HSBP1O75506 76 aa9.53□□□□□ -0.88
ABCF3-208ENST00000471226 A0A1W2PNN7 141 aa9.52□□□□□ -0.89
ABCF3-208ENST00000471226 LINC00310P59036 64 aa9.52□□□□□ -0.89
ABCF3-208ENST00000471226 CKS1BP61024 79 aa9.52□□□□□ -0.89
ABCF3-208ENST00000471226 Q6ZRP5 223 aa9.52□□□□□ -0.89
ABCF3-208ENST00000471226 SERF1AO75920 110 aa9.51□□□□□ -0.89
ABCF3-208ENST00000471226 SPINK8P0C7L1 97 aa9.51□□□□□ -0.89
ABCF3-208ENST00000471226 FAM19A2Q8N3H0 131 aa9.51□□□□□ -0.89
ABCF3-208ENST00000471226 MYCBP2O75592 4640 aa9.51□□□□□ -0.89
ABCF3-208ENST00000471226 H3BRM9 83 aa9.5□□□□□ -0.89
ABCF3-208ENST00000471226 ZNF22P17026 224 aaPredicted RBP9.5□□□□□ -0.89
ABCF3-208ENST00000471226 CXCL5P42830 114 aa9.5□□□□□ -0.89
ABCF3-208ENST00000471226 C9orf116Q5BN46 136 aaPredicted RBP9.5□□□□□ -0.89
ABCF3-208ENST00000471226 COX7B2Q8TF08 81 aa9.5□□□□□ -0.89
ABCF3-208ENST00000471226 C7orf33Q8WU49 177 aa9.5□□□□□ -0.89
ABCF3-208ENST00000471226 IFI27L1Q96BM0 104 aa9.5□□□□□ -0.89
ABCF3-208ENST00000471226 TRAV12-1A0A0B4J245 112 aa9.49□□□□□ -0.89
ABCF3-208ENST00000471226 NDUFC2-KCTD14E9PQ53 114 aa9.49□□□□□ -0.89
ABCF3-208ENST00000471226 F8VRH5 84 aa9.49□□□□□ -0.89
ABCF3-208ENST00000471226 PKHD1L1Q86WI1 4243 aa9.48□□□□□ -0.89
ABCF3-208ENST00000471226 IGLV5-39A0A0G2JS06 123 aa9.48□□□□□ -0.89
ABCF3-208ENST00000471226 C11orf86A6NJI1 115 aa9.48□□□□□ -0.89
ABCF3-208ENST00000471226 NUPR1O60356 82 aa9.48□□□□□ -0.89
ABCF3-208ENST00000471226 CHTOPQ9Y3Y2 248 aaKnown RBP9.48□□□□□ -0.89
ABCF3-208ENST00000471226 HNRNPA3P51991 378 aaKnown RBP9.47□□□□□ -0.89
ABCF3-208ENST00000471226 GAGE2EQ4V326 116 aa9.47□□□□□ -0.89
ABCF3-208ENST00000471226 GAGE2DQ9UEU5 116 aa9.47□□□□□ -0.89
ABCF3-208ENST00000471226 LEPROTL1O95214 131 aa9.45□□□□□ -0.9
ABCF3-208ENST00000471226 C9orf129Q5T035 196 aaKnown RBP9.45□□□□□ -0.9
ABCF3-208ENST00000471226 FAM168BA1KXE4 195 aa9.44□□□□□ -0.9
ABCF3-208ENST00000471226 HIST1H2BKO60814 126 aa9.44□□□□□ -0.9
ABCF3-208ENST00000471226 HIST1H2BJP06899 126 aa9.44□□□□□ -0.9
ABCF3-208ENST00000471226 HIST1H2BOP23527 126 aa9.44□□□□□ -0.9
ABCF3-208ENST00000471226 HIST1H2BBP33778 126 aa9.44□□□□□ -0.9
ABCF3-208ENST00000471226 HIST1H2BDP58876 126 aa9.44□□□□□ -0.9
ABCF3-208ENST00000471226 HIST1H2BCP62807 126 aa9.44□□□□□ -0.9
ABCF3-208ENST00000471226 HIST2H2BEQ16778 126 aa9.44□□□□□ -0.9
ABCF3-208ENST00000471226 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.44□□□□□ -0.9
ABCF3-208ENST00000471226 TMEM170BQ5T4T1 132 aa9.44□□□□□ -0.9
ABCF3-208ENST00000471226 KRTAP7-1Q8IUC3 87 aa9.44□□□□□ -0.9
ABCF3-208ENST00000471226 HIST1H2BHQ93079 126 aa9.44□□□□□ -0.9
ABCF3-208ENST00000471226 HIST1H2BNQ99877 126 aa9.44□□□□□ -0.9
ABCF3-208ENST00000471226 HIST1H2BMQ99879 126 aa9.44□□□□□ -0.9
ABCF3-208ENST00000471226 LRP1Q07954 4544 aaKnown RBP9.44□□□□□ -0.9
ABCF3-208ENST00000471226 PRR3P79522 188 aaKnown RBP9.43□□□□□ -0.9
ABCF3-208ENST00000471226 PHF5AQ7RTV0 110 aaKnown RBP9.43□□□□□ -0.9
ABCF3-208ENST00000471226 FAT3Q8TDW7 4589 aa9.43□□□□□ -0.9
ABCF3-208ENST00000471226 DMBT1Q9UGM3 2413 aaPredicted RBP9.42□□□□□ -0.9
ABCF3-208ENST00000471226 ODF1Q14990 250 aa9.42□□□□□ -0.9
ABCF3-208ENST00000471226 TMEM223A0PJW6 202 aa9.41□□□□□ -0.9
ABCF3-208ENST00000471226 HSPB8Q9UJY1 196 aa9.41□□□□□ -0.9
ABCF3-208ENST00000471226 KRTAP29-1A8MX34 341 aaPredicted RBP9.4□□□□□ -0.9
ABCF3-208ENST00000471226 FABP4P15090 132 aa9.4□□□□□ -0.9
ABCF3-208ENST00000471226 FAM19A5Q7Z5A7 132 aaPredicted RBP9.4□□□□□ -0.9
ABCF3-208ENST00000471226 XAGE1AQ9HD64 81 aa9.39□□□□□ -0.91
ABCF3-208ENST00000471226 H0Y8G0 127 aa9.38□□□□□ -0.91
ABCF3-208ENST00000471226 S100A1P23297 94 aa9.38□□□□□ -0.91
ABCF3-208ENST00000471226 M0QXV9 152 aa9.37□□□□□ -0.91
ABCF3-208ENST00000471226 OXTP01178 125 aa9.37□□□□□ -0.91
ABCF3-208ENST00000471226 SERTAD4-AS1Q5TG53 156 aa9.37□□□□□ -0.91
ABCF3-208ENST00000471226 ZNF625Q96I27 306 aaPredicted RBP9.37□□□□□ -0.91
ABCF3-208ENST00000471226 PSORS1C2Q9UIG4 136 aa9.37□□□□□ -0.91
ABCF3-208ENST00000471226 SFTA2Q6UW10 78 aa9.36□□□□□ -0.91
ABCF3-208ENST00000471226 KRTAP11-1Q8IUC1 163 aa9.36□□□□□ -0.91
ABCF3-208ENST00000471226 SRSF9Q13242 221 aaKnown RBP eCLIP9.35□□□□□ -0.91
ABCF3-208ENST00000471226 COX17Q14061 63 aa9.35□□□□□ -0.91
ABCF3-208ENST00000471226 COA6Q5JTJ3 125 aaKnown RBP9.35□□□□□ -0.91
ABCF3-208ENST00000471226 MAP1LC3CQ9BXW4 147 aa9.35□□□□□ -0.91
ABCF3-208ENST00000471226 ERG28Q9UKR5 140 aa9.35□□□□□ -0.91
ABCF3-208ENST00000471226 PLA2G2DQ9UNK4 145 aa9.35□□□□□ -0.91
ABCF3-208ENST00000471226 ATP6V1G1O75348 118 aa9.34□□□□□ -0.91
ABCF3-208ENST00000471226 PLNP26678 52 aa9.34□□□□□ -0.91
ABCF3-208ENST00000471226 PFN2P35080 140 aa9.34□□□□□ -0.91
ABCF3-208ENST00000471226 C22orf24Q9Y442 160 aa9.34□□□□□ -0.91
ABCF3-208ENST00000471226 J3QL48 77 aa9.33□□□□□ -0.92
ABCF3-208ENST00000471226 DPM2O94777 84 aa9.33□□□□□ -0.92
ABCF3-208ENST00000471226 SPINK6Q6UWN8 80 aa9.33□□□□□ -0.92
ABCF3-208ENST00000471226 TP73-AS1Q9UF72 201 aa9.33□□□□□ -0.92
ABCF3-208ENST00000471226 HERC1Q15751 4861 aa9.32□□□□□ -0.92
ABCF3-208ENST00000471226 C1orf137Q5JT78 98 aa9.32□□□□□ -0.92
ABCF3-208ENST00000471226 SYS1-DBNDD2H3BUS1 97 aa9.31□□□□□ -0.92
ABCF3-208ENST00000471226 IGKCP01834 107 aa9.31□□□□□ -0.92
ABCF3-208ENST00000471226 PMCHL2Q9BQD1 86 aa9.31□□□□□ -0.92
ABCF3-208ENST00000471226 IGLV5-37A0A075B6J1 123 aa9.3□□□□□ -0.92
ABCF3-208ENST00000471226 UBE2BP63146 152 aa9.3□□□□□ -0.92
ABCF3-208ENST00000471226 LBHQ53QV2 105 aaPredicted RBP9.3□□□□□ -0.92
ABCF3-208ENST00000471226 SND1-IT1Q9HBX3 110 aa9.3□□□□□ -0.92
ABCF3-208ENST00000471226 LEPROTO15243 131 aa9.29□□□□□ -0.92
ABCF3-208ENST00000471226 IGLV7-43P04211 117 aa9.29□□□□□ -0.92
ABCF3-208ENST00000471226 MRPL55Q7Z7F7 128 aaKnown RBP9.29□□□□□ -0.92
ABCF3-208ENST00000471226 TSPEAR-AS2P59090 65 aa9.28□□□□□ -0.92
ABCF3-208ENST00000471226 HERV-K104P63124 156 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms