RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 CDKN2A-AS1Q9UH64 79 aa3.96□□□□□ -1.78
HDAC8-216ENST00000470998 TSPAN13O95857 204 aa3.95□□□□□ -1.78
HDAC8-216ENST00000470998 COX6CP09669 75 aa3.95□□□□□ -1.78
HDAC8-216ENST00000470998 SPART-AS1P0CW21 52 aa3.95□□□□□ -1.78
HDAC8-216ENST00000470998 CXCL5P42830 114 aa3.95□□□□□ -1.78
HDAC8-216ENST00000470998 FAM222AQ5U5X8 452 aa3.95□□□□□ -1.78
HDAC8-216ENST00000470998 CEMP1Q6PRD7 247 aaPredicted RBP3.95□□□□□ -1.78
HDAC8-216ENST00000470998 LITAFQ99732 161 aa3.95□□□□□ -1.78
HDAC8-216ENST00000470998 CHCHD5Q9BSY4 110 aa3.95□□□□□ -1.78
HDAC8-216ENST00000470998 ERG28Q9UKR5 140 aa3.95□□□□□ -1.78
HDAC8-216ENST00000470998 A0A087WZ39 114 aa3.94□□□□□ -1.78
HDAC8-216ENST00000470998 TRAV8-3A0A0A6YYJ7 113 aa3.94□□□□□ -1.78
HDAC8-216ENST00000470998 TRAV13-1A0A0B4J241 112 aa3.94□□□□□ -1.78
HDAC8-216ENST00000470998 TRBV30A0A0K0K1B3 111 aa3.94□□□□□ -1.78
HDAC8-216ENST00000470998 A4D1N5 150 aa3.94□□□□□ -1.78
HDAC8-216ENST00000470998 F5H768 121 aa3.94□□□□□ -1.78
HDAC8-216ENST00000470998 H3BNG1 76 aa3.94□□□□□ -1.78
HDAC8-216ENST00000470998 APOMO95445 188 aa3.94□□□□□ -1.78
HDAC8-216ENST00000470998 SPINK8P0C7L1 97 aa3.94□□□□□ -1.78
HDAC8-216ENST00000470998 CFC1BP0CG36 223 aa3.94□□□□□ -1.78
HDAC8-216ENST00000470998 CFC1P0CG37 223 aa3.94□□□□□ -1.78
HDAC8-216ENST00000470998 DEFB130BP0DP73 79 aa3.94□□□□□ -1.78
HDAC8-216ENST00000470998 DEFB130AP0DP74 79 aa3.94□□□□□ -1.78
HDAC8-216ENST00000470998 DAD1P61803 113 aa3.94□□□□□ -1.78
HDAC8-216ENST00000470998 MRPL23Q16540 153 aaKnown RBP3.94□□□□□ -1.78
HDAC8-216ENST00000470998 ZNF625Q96I27 306 aaPredicted RBP3.94□□□□□ -1.78
HDAC8-216ENST00000470998 LINC01600Q96MT4 127 aa3.94□□□□□ -1.78
HDAC8-216ENST00000470998 Q9UF83 564 aa3.94□□□□□ -1.78
HDAC8-216ENST00000470998 DNAH7Q8WXX0 4024 aa3.93□□□□□ -1.78
HDAC8-216ENST00000470998 SACSQ9NZJ4 4579 aa3.93□□□□□ -1.78
HDAC8-216ENST00000470998 IGHV3-64A0A075B6Q5 118 aa3.93□□□□□ -1.78
HDAC8-216ENST00000470998 IGHV3OR16-9A0A0B4J2B5 98 aa3.93□□□□□ -1.78
HDAC8-216ENST00000470998 IGHV4-28A0A0C4DH34 117 aa3.93□□□□□ -1.78
HDAC8-216ENST00000470998 IBA57-AS1B1ANH7 110 aa3.93□□□□□ -1.78
HDAC8-216ENST00000470998 H3BMG7 143 aa3.93□□□□□ -1.78
HDAC8-216ENST00000470998 IGHV3-33P01772 117 aa3.93□□□□□ -1.78
HDAC8-216ENST00000470998 SS18Q15532 418 aa3.93□□□□□ -1.78
HDAC8-216ENST00000470998 DEFB135Q30KP9 77 aa3.93□□□□□ -1.78
HDAC8-216ENST00000470998 RNASE13Q5GAN3 156 aaKnown RBP3.93□□□□□ -1.78
HDAC8-216ENST00000470998 MUSTN1Q8IVN3 82 aa3.93□□□□□ -1.78
HDAC8-216ENST00000470998 Q8NAQ8 132 aa3.93□□□□□ -1.78
HDAC8-216ENST00000470998 DEFB104AQ8WTQ1 72 aa3.93□□□□□ -1.78
HDAC8-216ENST00000470998 C11orf68Q9H3H3 251 aaKnown RBP3.93□□□□□ -1.78
HDAC8-216ENST00000470998 Q9H8V8 135 aa3.93□□□□□ -1.78
HDAC8-216ENST00000470998 DYNC2H1Q8NCM8 4307 aaKnown RBP3.93□□□□□ -1.78
HDAC8-216ENST00000470998 BIRC6Q9NR09 4857 aa3.92□□□□□ -1.78
HDAC8-216ENST00000470998 TRAV13-2A0A0B4J235 113 aa3.92□□□□□ -1.78
HDAC8-216ENST00000470998 LOC107984156A0A0G2JMH3 177 aa3.92□□□□□ -1.78
HDAC8-216ENST00000470998 PRSS2P07478 247 aa3.92□□□□□ -1.78
HDAC8-216ENST00000470998 PSMB2P49721 201 aa3.92□□□□□ -1.78
HDAC8-216ENST00000470998 RBX1P62877 108 aa3.92□□□□□ -1.78
HDAC8-216ENST00000470998 GAGE6Q13070 117 aa3.92□□□□□ -1.78
HDAC8-216ENST00000470998 ATXN8Q156A1 80 aa3.92□□□□□ -1.78
HDAC8-216ENST00000470998 Q1RN00 199 aa3.92□□□□□ -1.78
HDAC8-216ENST00000470998 MEIG1Q5JSS6 88 aa3.92□□□□□ -1.78
HDAC8-216ENST00000470998 LELP1Q5T871 98 aa3.92□□□□□ -1.78
HDAC8-216ENST00000470998 ARL17AQ8IVW1 177 aa3.92□□□□□ -1.78
HDAC8-216ENST00000470998 Q8IZM0 81 aa3.92□□□□□ -1.78
HDAC8-216ENST00000470998 COX7B2Q8TF08 81 aa3.92□□□□□ -1.78
HDAC8-216ENST00000470998 ICOSQ9Y6W8 199 aa3.92□□□□□ -1.78
HDAC8-216ENST00000470998 TENM3Q9P273 2699 aa3.91□□□□□ -1.78
HDAC8-216ENST00000470998 LOC100131303A0A0U1RQF7 123 aa3.91□□□□□ -1.78
HDAC8-216ENST00000470998 LINC00959A0A1B0GUT2 108 aa3.91□□□□□ -1.78
HDAC8-216ENST00000470998 SCGB1C2P0DMR2 95 aa3.91□□□□□ -1.78
HDAC8-216ENST00000470998 COX6A2Q02221 97 aa3.91□□□□□ -1.78
HDAC8-216ENST00000470998 COL7A1Q02388 2944 aa3.91□□□□□ -1.78
HDAC8-216ENST00000470998 LINC00308Q8TCZ7 52 aa3.91□□□□□ -1.78
HDAC8-216ENST00000470998 CARD19Q96LW7 228 aa3.91□□□□□ -1.78
HDAC8-216ENST00000470998 NAA38Q9BRA0 125 aaKnown RBP3.91□□□□□ -1.78
HDAC8-216ENST00000470998 PRO0461Q9UI25 63 aa3.91□□□□□ -1.78
HDAC8-216ENST00000470998 STARD9Q9P2P6 4700 aa3.91□□□□□ -1.78
HDAC8-216ENST00000470998 AGRNO00468 2067 aa3.9□□□□□ -1.78
HDAC8-216ENST00000470998 H3BT86 120 aa3.9□□□□□ -1.79
HDAC8-216ENST00000470998 COX17Q14061 63 aa3.9□□□□□ -1.79
HDAC8-216ENST00000470998 CD164L2Q6UWJ8 174 aa3.9□□□□□ -1.79
HDAC8-216ENST00000470998 TEN1Q86WV5 123 aa3.9□□□□□ -1.79
HDAC8-216ENST00000470998 VPS25Q9BRG1 176 aa3.9□□□□□ -1.79
HDAC8-216ENST00000470998 RETNQ9HD89 108 aa3.9□□□□□ -1.79
HDAC8-216ENST00000470998 IGLV4-60A0A075B6I1 120 aa3.89□□□□□ -1.79
HDAC8-216ENST00000470998 TRAV8-4A0A0B4J246 113 aa3.89□□□□□ -1.79
HDAC8-216ENST00000470998 NUPR2A6NF83 97 aa3.89□□□□□ -1.79
HDAC8-216ENST00000470998 TMEM262E9PQX1 116 aa3.89□□□□□ -1.79
HDAC8-216ENST00000470998 COX7A2LO14548 114 aa3.89□□□□□ -1.79
HDAC8-216ENST00000470998 CRPP02741 224 aa3.89□□□□□ -1.79
HDAC8-216ENST00000470998 RPL13AP40429 203 aaKnown RBP3.89□□□□□ -1.79
HDAC8-216ENST00000470998 ADAMTSL4-AS1Q5T5F5 129 aa3.89□□□□□ -1.79
HDAC8-216ENST00000470998 PPDPFLQ8WWR9 84 aa3.89□□□□□ -1.79
HDAC8-216ENST00000470998 PLECQ15149 4684 aaKnown RBP3.89□□□□□ -1.79
HDAC8-216ENST00000470998 DNAH1Q9P2D7 4330 aa3.88□□□□□ -1.79
HDAC8-216ENST00000470998 STAB2Q8WWQ8 2551 aa3.88□□□□□ -1.79
HDAC8-216ENST00000470998 TRBV10-2A0A0K0K1G8 114 aa3.88□□□□□ -1.79
HDAC8-216ENST00000470998 F8WDY8 70 aa3.88□□□□□ -1.79
HDAC8-216ENST00000470998 SLC25A20O43772 301 aa3.88□□□□□ -1.79
HDAC8-216ENST00000470998 NDUFC2O95298 119 aa3.88□□□□□ -1.79
HDAC8-216ENST00000470998 TCL1BO95988 128 aa3.88□□□□□ -1.79
HDAC8-216ENST00000470998 WFDC2Q14508 124 aa3.88□□□□□ -1.79
HDAC8-216ENST00000470998 LINC01620Q4KN68 170 aa3.88□□□□□ -1.79
HDAC8-216ENST00000470998 C6orf226Q5I0X4 101 aa3.88□□□□□ -1.79
HDAC8-216ENST00000470998 CFAP161Q6P656 301 aa3.88□□□□□ -1.79
HDAC8-216ENST00000470998 PRR34Q9NV39 138 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 326.9 ms