RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 NTM-AS1Q6ZSK4 140 aa10.27□□□□□ -0.76
HDAC7-219ENST00000470668 Q6ZSN1 163 aa10.27□□□□□ -0.76
HDAC7-219ENST00000470668 COL4A2P08572 1712 aa10.27□□□□□ -0.77
HDAC7-219ENST00000470668 LINC00315P59091 139 aa10.27□□□□□ -0.77
HDAC7-219ENST00000470668 SERP1Q9Y6X1 66 aa10.27□□□□□ -0.77
HDAC7-219ENST00000470668 TMEM89A2RUT3 159 aa10.27□□□□□ -0.77
HDAC7-219ENST00000470668 MIFP14174 115 aa10.27□□□□□ -0.77
HDAC7-219ENST00000470668 USP24Q9UPU5 2620 aa10.26□□□□□ -0.77
HDAC7-219ENST00000470668 TRAV7A0A075B6U4 112 aa10.26□□□□□ -0.77
HDAC7-219ENST00000470668 LINC00337Q8N6G1 96 aa10.26□□□□□ -0.77
HDAC7-219ENST00000470668 DEFB113Q30KQ7 82 aa10.26□□□□□ -0.77
HDAC7-219ENST00000470668 CELA1Q9UNI1 258 aa10.26□□□□□ -0.77
HDAC7-219ENST00000470668 NDUFC1O43677 76 aa10.26□□□□□ -0.77
HDAC7-219ENST00000470668 C18orf65Q6ZTR6 163 aa10.26□□□□□ -0.77
HDAC7-219ENST00000470668 RMI2Q96E14 147 aa10.26□□□□□ -0.77
HDAC7-219ENST00000470668 H3BQ85 93 aa10.25□□□□□ -0.77
HDAC7-219ENST00000470668 APOC4P55056 127 aa10.25□□□□□ -0.77
HDAC7-219ENST00000470668 PCSK5Q92824 1860 aa10.25□□□□□ -0.77
HDAC7-219ENST00000470668 Q8N3U1 123 aa10.24□□□□□ -0.77
HDAC7-219ENST00000470668 MRPL55Q7Z7F7 128 aaKnown RBP10.24□□□□□ -0.77
HDAC7-219ENST00000470668 WFDC10AQ9H1F0 79 aa10.24□□□□□ -0.77
HDAC7-219ENST00000470668 LINC00959A0A1B0GUT2 108 aa10.24□□□□□ -0.77
HDAC7-219ENST00000470668 TRBV6-4A0A1B0GX49 114 aa10.24□□□□□ -0.77
HDAC7-219ENST00000470668 CRYGAP11844 174 aa10.24□□□□□ -0.77
HDAC7-219ENST00000470668 C9orf116Q5BN46 136 aaPredicted RBP10.24□□□□□ -0.77
HDAC7-219ENST00000470668 Q9UF83 564 aa10.23□□□□□ -0.77
HDAC7-219ENST00000470668 REV3LO60673 3130 aa10.23□□□□□ -0.77
HDAC7-219ENST00000470668 DEFB121Q5J5C9 76 aa10.22□□□□□ -0.77
HDAC7-219ENST00000470668 C4orf3Q8WVX3 66 aa10.22□□□□□ -0.77
HDAC7-219ENST00000470668 FAM218AQ96MZ4 157 aa10.22□□□□□ -0.77
HDAC7-219ENST00000470668 AVPP01185 164 aa10.22□□□□□ -0.77
HDAC7-219ENST00000470668 Q8N814 137 aa10.22□□□□□ -0.77
HDAC7-219ENST00000470668 IGLV4-60A0A075B6I1 120 aa10.21□□□□□ -0.77
HDAC7-219ENST00000470668 SPART-AS1P0CW21 52 aa10.21□□□□□ -0.77
HDAC7-219ENST00000470668 IGLV1-40P01703 118 aa10.21□□□□□ -0.78
HDAC7-219ENST00000470668 A8MTW9 85 aa10.21□□□□□ -0.78
HDAC7-219ENST00000470668 PRORYQ9H606 182 aa10.2□□□□□ -0.78
HDAC7-219ENST00000470668 J3QKU1 62 aa10.19□□□□□ -0.78
HDAC7-219ENST00000470668 NANOS2P60321 138 aaKnown RBP10.19□□□□□ -0.78
HDAC7-219ENST00000470668 UBE2DNLQ8IWF7 75 aa10.19□□□□□ -0.78
HDAC7-219ENST00000470668 BBC3Q96PG8 261 aaPredicted RBP10.19□□□□□ -0.78
HDAC7-219ENST00000470668 ATP5EP56381 51 aaPredicted RBP10.18□□□□□ -0.78
HDAC7-219ENST00000470668 FAM30AQ9NZY2 134 aa10.18□□□□□ -0.78
HDAC7-219ENST00000470668 AKAP13Q12802 2813 aa10.18□□□□□ -0.78
HDAC7-219ENST00000470668 A0A096LNI7 61 aa10.18□□□□□ -0.78
HDAC7-219ENST00000470668 ZNF843Q8N446 348 aa10.18□□□□□ -0.78
HDAC7-219ENST00000470668 WFDC10BQ8IUB3 73 aa10.16□□□□□ -0.78
HDAC7-219ENST00000470668 IGKV2-28A0A075B6P5 120 aa10.16□□□□□ -0.78
HDAC7-219ENST00000470668 IGKV2D-28P01615 120 aa10.16□□□□□ -0.78
HDAC7-219ENST00000470668 WFDC13Q8IUB5 93 aa10.16□□□□□ -0.78
HDAC7-219ENST00000470668 CFAP47Q6ZTR5 3102 aa10.16□□□□□ -0.78
HDAC7-219ENST00000470668 CD164L2Q6UWJ8 174 aa10.16□□□□□ -0.78
HDAC7-219ENST00000470668 UNQ6190/PRO20217Q6UXQ8 127 aa10.16□□□□□ -0.78
HDAC7-219ENST00000470668 SMCR5Q8TEV8 140 aa10.16□□□□□ -0.78
HDAC7-219ENST00000470668 H0Y9J4 135 aa10.15□□□□□ -0.78
HDAC7-219ENST00000470668 PRO0628Q9UI54 55 aa10.15□□□□□ -0.78
HDAC7-219ENST00000470668 EIF4EBP3O60516 100 aaPredicted RBP10.15□□□□□ -0.79
HDAC7-219ENST00000470668 RPS28P62857 69 aaKnown RBP10.15□□□□□ -0.79
HDAC7-219ENST00000470668 HIGD2AQ9BW72 106 aa10.14□□□□□ -0.79
HDAC7-219ENST00000470668 A0A0J9YWU9 116 aa10.14□□□□□ -0.79
HDAC7-219ENST00000470668 PSPHP1O15172 72 aa10.14□□□□□ -0.79
HDAC7-219ENST00000470668 Q6ZVQ6 151 aa10.14□□□□□ -0.79
HDAC7-219ENST00000470668 A0A087WZ39 114 aa10.13□□□□□ -0.79
HDAC7-219ENST00000470668 TRBV7-6A0A0J9YX20 115 aa10.13□□□□□ -0.79
HDAC7-219ENST00000470668 ADGRG4Q8IZF6 3080 aa10.13□□□□□ -0.79
HDAC7-219ENST00000470668 Q8IZM0 81 aa10.13□□□□□ -0.79
HDAC7-219ENST00000470668 ZNF73O43830 326 aaPredicted RBP10.13□□□□□ -0.79
HDAC7-219ENST00000470668 NDUFB1O75438 58 aa10.13□□□□□ -0.79
HDAC7-219ENST00000470668 ODF3L2Q3SX64 289 aa10.13□□□□□ -0.79
HDAC7-219ENST00000470668 Q8N9L7 120 aa10.13□□□□□ -0.79
HDAC7-219ENST00000470668 SPTBN5Q9NRC6 3674 aaKnown RBP10.12□□□□□ -0.79
HDAC7-219ENST00000470668 KRTAP10-9P60411 292 aa10.12□□□□□ -0.79
HDAC7-219ENST00000470668 TMEM254Q8TBM7 123 aa10.12□□□□□ -0.79
HDAC7-219ENST00000470668 CHKB-CPT1BH3BT56 60 aa10.11□□□□□ -0.79
HDAC7-219ENST00000470668 LINC01547P58512 204 aaPredicted RBP10.11□□□□□ -0.79
HDAC7-219ENST00000470668 IGLV5-39A0A0G2JS06 123 aa10.11□□□□□ -0.79
HDAC7-219ENST00000470668 CYSRT1A8MQ03 144 aa10.11□□□□□ -0.79
HDAC7-219ENST00000470668 PMAIP1Q13794 54 aa10.11□□□□□ -0.79
HDAC7-219ENST00000470668 IGHV4-31P0DP07 118 aa10.11□□□□□ -0.79
HDAC7-219ENST00000470668 LINC00482Q8N8I6 264 aa10.11□□□□□ -0.79
HDAC7-219ENST00000470668 TNRC18O15417 2968 aaPredicted RBP10.11□□□□□ -0.79
HDAC7-219ENST00000470668 TRBV10-3A0A0K0K1G6 114 aa10.1□□□□□ -0.79
HDAC7-219ENST00000470668 A6NED7 52 aa10.1□□□□□ -0.79
HDAC7-219ENST00000470668 DNAJC9-AS1A6NH13 148 aa10.1□□□□□ -0.79
HDAC7-219ENST00000470668 LITAFQ99732 161 aa10.1□□□□□ -0.79
HDAC7-219ENST00000470668 Q6YL49 198 aa10.1□□□□□ -0.79
HDAC7-219ENST00000470668 CFAP46Q8IYW2 2715 aa10.09□□□□□ -0.79
HDAC7-219ENST00000470668 PRYO14603 147 aa10.09□□□□□ -0.79
HDAC7-219ENST00000470668 IGKV2-24A0A0C4DH68 120 aa10.09□□□□□ -0.79
HDAC7-219ENST00000470668 ZNF702PQ9H963 129 aa10.09□□□□□ -0.79
HDAC7-219ENST00000470668 ATRQ13535 2644 aa10.08□□□□□ -0.8
HDAC7-219ENST00000470668 PLA2G2AP14555 144 aa10.07□□□□□ -0.8
HDAC7-219ENST00000470668 FAM19A4Q96LR4 140 aa10.07□□□□□ -0.8
HDAC7-219ENST00000470668 FHL2Q14192 279 aa10.07□□□□□ -0.8
HDAC7-219ENST00000470668 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.07□□□□□ -0.8
HDAC7-219ENST00000470668 LINC01006Q8NI28 216 aa10.06□□□□□ -0.8
HDAC7-219ENST00000470668 FLNAP21333 2647 aaKnown RBP10.05□□□□□ -0.8
HDAC7-219ENST00000470668 IGKV4-1P06312 121 aa10.04□□□□□ -0.8
HDAC7-219ENST00000470668 BEAN1Q3B7T3 259 aa10.04□□□□□ -0.8
HDAC7-219ENST00000470668 COX17Q14061 63 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms